EDIT

Close conversation when closing DerivateSearchView

• code conventions

• fixed filtering by specimen type (UNKNOWN = wild card)

• when searching for a taxon also the indirectly associated specimens of the derivative hierarchy are shown

• changed "derivate" to "derivatives"

• changed label provider according to requirements

• fixed possible widget is disposed exception

• added findOccurrences() and countOccurrences() to service layer
  • added configurator for these methods
  • optimized retrieval with HQL query
  • made use of service method in DerivateSearchView

• removed duplicate barcode in label

• added icons for derivates which have character data attached

• fixed potential ClassCastException

• used most significant identifier for derivate labels
  • refactored session loading

• added derivate hierarchy section
  • refactored DerivateContentProvider

• fixed possible null label

• adapted details views and wizards to cdm changes (amplifaction + amplification result)
  • added missing parameters to details views

• temporarily commented compile errors

• added amplification description to single read label in hierarchy
  • added marker to update method of amplification description

• layout enhancement

• added barcode to MediaSpecimen label

• moved extension point for taxon navigator context menu
  • fixed DerivateSearchView layout
  • added "disabled" extension point for toggling individual assciations in factual data view

• added clear button to DerivateSearchView
  • made use of cdmlib service to get associated specimen for one taxon (#4506)

• added context menu entry to taxon navigator to open associated derivates in DerivateEditor
  • added taxon filter to DerivateSearchView (non-functional) (#4506)

• added static method to DerivateLabelProvider to get the derivate text
  • refactored moving of derivates to use the operation framework.
  • immplemented undo/redo

• extended DerivateSearchView to allow multiple selection
  • added context menu to open multiple elements in DerivateView
  • extended DerivateView to show multiple derivate hierarchies in one view

• fixed possible NPE

• fixed possible SessionException

• generalized sample designation GUI elements
  • added sample designation to TissueSample details view
  • added some more parameters to TissueSample details view

• extended DnaQuality details view
  • refactored DateElement creation

• added more paramaters to DnaQuality details view
  • fixed ordering of sample designations for DnaSamples (first is current)

• added sampleDesignation section to DnaSample details view (#4237)
  • added sampleDesignation to DerivateLabelProvider

merge-update from trunk

• removed workbenchShutdown actions because the editor cannot be closed if they fail

merge-update from trunk

• avoid possible NPE

• removed duplicate class variable

merge-update from trunk

• fixed possible LazyInitializaitionException in DerivateLabelProvdider

merge-update from trunk

• added filter button to setEnabled()

merge-update from trunk

Moved all logging and dialog functionality to the new class MessagingUtils.
Refactoring code to adapt to above change.
Added new custom error dialog - CdmErrorDialog
Added runtime exception handling to the ApplicationWorkbenchAdvisor by adding a custom status handler

• added type information to DTO
  • enhanced media labeling

• adapted some labels in DerivateLabelProvider

• set selection to UNKNOWN when datasource is disconnected

merge-update from trunk

• generalized adding MediaSpecimen in DerivateView

• added property change listener to original data label
  • fixed conversation binding when getting derivate labels

• removed debug output
  • made DerivateLabelProvider use occurrence service

• fixed potential session exceptions during closing/saving

• added "Published in" parameter to MediaSpecimen DetailsView (#4239)

• added functionality to filter assigned specimens in the DerivateSearchView (fixes #4252)

• add placeholder for Media label

• added conversation/session support to DerivateLabelProvider
  • GUI widgets using the provider need to provide a conversation/session to avoid LazyInitializationException

• implemented differentiation of the three image types (Artwork, Living Plant Photo, Specimen Scan) in the DerivateView and DetailsView

• implemented derivate specific textual representation in DerivateView

• set default derivate typ filter to "unknown"

• javadoc

• refactored context menu for DerivateView to be programmatic instead of declarative (using plugin.xml)
  • fixed icon bug for DerivateSearchView

• added update() method to DerivateView
  • display different icon for SingleReads linked to multiple Sequences

• added Copy/Paste for SingleRead->Sequence to DerivateView
  • copying actually just creates a link

• removed Amplification as a TreeNode from the DerivateView
  • added Amplification to DetailsView of SingleRead as an EntitySelectionElement

• reset input fields of DerivateSearchView when context stops

• added drag'n'drop support for Sequences
  • added context listener to DerivateSearchView
  • refactored MVC pattern of DerivateSearchView

• refactored selection of DerivateView to be TreeNode
  • adapted selection handling
  • restructured derivate hierarchy
  • Amplifications are now a direct child of Sequences
  • the can only be created when having a SingleRead
  • this representation does not affect the cdm structure

• added code to show icon for Amplification, Sequence and SingleRead (image files still missing)
  • removed text fields for media file in dna DetailsViews
  • added contig file in Sequence DetailsView

• added "Search"-Button to DerivateSearchView

• enabled DerivateType filter in DerivateSearchView

• added combo controller to combo field in DerivateSearchView

• separated GUI from control elements for term combo widget (part of #3627)

• removed remaining occurences of "campanula"

• cleaned up package structure
  • removed campanula package