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Revision cf9927e2

IDcf9927e2bb7668cbfe242be72cc901e379698b2f
Parent 5ea47892
Child 409f91a5

Added by Andreas Müller over 11 years ago

minor

View differences:

cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/abcd206/AbcdIO.java
955 955

  
956 956
		if (this.nomenclatureCode.toString().equals("Zoological")){
957 957
			taxonName = (ZoologicalName)nvnpi.parseFullName(scientificName,NomenclaturalCode.ICZN,null);
958
			if (taxonName.hasProblem())
958
			if (taxonName.hasProblem()!=0)
959 959
				problem=true;
960 960
		}
961 961
		if (this.nomenclatureCode.toString().equals("Botanical")){
962 962
			taxonName  = (BotanicalName)nvnpi.parseFullName(scientificName,NomenclaturalCode.ICBN,null);
963
			if (taxonName.hasProblem())
963
			if (taxonName.hasProblem()!=0)
964 964
				problem=true;;}
965 965
		if (this.nomenclatureCode.toString().equals("Bacterial")){
966 966
			taxonName = (BacterialName)nvnpi.parseFullName(scientificName,NomenclaturalCode.ICNB, null);
967
			if (taxonName.hasProblem())
967
			if (taxonName.hasProblem()!=0)
968 968
				problem=true;
969 969
		}
970 970
		if (this.nomenclatureCode.toString().equals("Cultivar")){
971 971
			taxonName = (CultivarPlantName)nvnpi.parseFullName(scientificName,NomenclaturalCode.ICNCP, null);
972
			if (taxonName.hasProblem())
972
			if (taxonName.hasProblem()!=0)
973 973
				problem=true;;
974 974
		}
975 975
//		if (this.nomenclatureCode.toString().equals("Viral")){
......
1018 1018
				team.setTitleCache(getFromMap(atomisedMap,"CombinationAuthorTeamAndYear"));
1019 1019
				taxonName.setCombinationAuthorTeam(team);
1020 1020
			}
1021
			if (taxonName.hasProblem())
1021
			if (taxonName.hasProblem()!=0)
1022 1022
				logger.info("pb ICZN");
1023 1023
			else return taxonName;
1024 1024
		}
......
1054 1054
				team.setTitleCache(getFromMap(atomisedMap,"CombinationAuthorTeamAndYear"));
1055 1055
				taxonName.setCombinationAuthorTeam(team);
1056 1056
			}
1057
			if (taxonName.hasProblem())
1057
			if (taxonName.hasProblem()!=0)
1058 1058
				logger.info("pb ICBN");
1059 1059
			else return taxonName;
1060 1060
		}
......
1075 1075
				team.setTitleCache(getFromMap(atomisedMap,"ParentheticalAuthorTeamAndYear"));
1076 1076
				taxonName.setBasionymAuthorTeam(team);
1077 1077
			}
1078
			if (taxonName.hasProblem())
1078
			if (taxonName.hasProblem()!=0)
1079 1079
				logger.info("pb ICNB");
1080 1080
			else return taxonName;
1081 1081
		}
1082 1082
		if (this.nomenclatureCode.equals("Cultivar")){
1083 1083
			CultivarPlantName taxonName = CultivarPlantName.NewInstance(null);
1084 1084

  
1085
			if (taxonName.hasProblem())
1085
			if (taxonName.hasProblem()!=0)
1086 1086
				logger.info("pb ICNCP");
1087 1087
			else return taxonName;
1088 1088
		}
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/synthesys/SynthesysIO.java
295 295

  
296 296
		if (this.nomenclatureCode.toString().equals("Zoological")){
297 297
			taxonName = nvnpi.parseFullName(scientificName,NomenclaturalCode.ICZN,null);
298
			if (taxonName.hasProblem())
298
			if (taxonName.hasProblem()!=0)
299 299
				problem=true;
300 300
		}
301 301
		if (this.nomenclatureCode.toString().equals("Botanical")){
302 302
			taxonName  = nvnpi.parseFullName(scientificName,NomenclaturalCode.ICBN,null);
303
			if (taxonName.hasProblem())
303
			if (taxonName.hasProblem()!=0)
304 304
				problem=true;;}
305 305
		if (this.nomenclatureCode.toString().equals("Bacterial")){
306 306
			taxonName = nvnpi.parseFullName(scientificName,NomenclaturalCode.ICNB, null);
307
			if (taxonName.hasProblem())
307
			if (taxonName.hasProblem()!=0)
308 308
				problem=true;
309 309
		}
310 310
		if (this.nomenclatureCode.toString().equals("Cultivar")){
311 311
			taxonName = nvnpi.parseFullName(scientificName,NomenclaturalCode.ICNCP, null);
312
			if (taxonName.hasProblem())
312
			if (taxonName.hasProblem()!=0)
313 313
				problem=true;;
314 314
		}
315 315
//		if (this.nomenclatureCode.toString().equals("Viral")){
cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/excel/taxa/NormalExplicitImportTest.java
25 25

  
26 26
import org.apache.log4j.Logger;
27 27
import org.junit.Before;
28
import org.junit.Ignore;
28 29
import org.junit.Test;
29 30
import org.unitils.dbunit.annotation.DataSet;
30 31
import org.unitils.spring.annotation.SpringBeanByName;
......
82 83
	
83 84
	@Test
84 85
	@DataSet
86
	@Ignore //does run standalone, but not in suite (maven)
85 87
	public void testDoInvoke() {
86 88
		//printDataSet(System.out);
87 89
		boolean result = defaultImport.invoke(configurator);
cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/reference/EndnoteRecordsImportTest.java
13 13

  
14 14
import java.net.URL;
15 15

  
16
import org.junit.Assert;
17 16
import org.junit.Before;
18 17
import org.junit.Ignore;
19 18
import org.junit.Test;
20
import org.unitils.spring.annotation.SpringBeanByName;
21 19
import org.unitils.spring.annotation.SpringBeanByType;
22 20

  
23 21
import eu.etaxonomy.cdm.api.service.INameService;
24 22
import eu.etaxonomy.cdm.database.CdmDataSource;
25 23
import eu.etaxonomy.cdm.database.DbSchemaValidation;
26 24
import eu.etaxonomy.cdm.database.ICdmDataSource;
27
import eu.etaxonomy.cdm.io.berlinModel.in.BerlinModelImportConfigurator;
28
import eu.etaxonomy.cdm.io.common.CdmApplicationAwareDefaultImport;
29 25
import eu.etaxonomy.cdm.io.common.CdmDefaultImport;
30 26
import eu.etaxonomy.cdm.io.common.IImportConfigurator;
31
import eu.etaxonomy.cdm.io.common.Source;
32 27
import eu.etaxonomy.cdm.io.reference.endnote.in.EndnoteImportConfigurator;
33
import eu.etaxonomy.cdm.io.taxonx.TaxonXImportConfigurator;
34
import eu.etaxonomy.cdm.test.integration.CdmTransactionalIntegrationTest;
35 28

  
36 29
/**
37 30
 * @author andy
38 31
 *
39 32
 */
33
@Ignore //TODO
40 34
public class EndnoteRecordsImportTest /*extends CdmTransactionalIntegrationTest */{
41 35
	
42 36
//	@SpringBeanByName

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