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cdmlib @ master

# Date Author Comment
528e745a 05/06/2019 04:42 PM jenkins

Merge branch 'release/5.7.0'

a87acd96 05/06/2019 04:26 PM jenkins

updating poms for branch'release/5.7.0' with non-snapshot versions

0a9ff316 05/03/2019 03:45 PM Andreas Müller

cleanup

09ed14f5 05/03/2019 03:45 PM Andreas Müller

fix preference value length check in CdmPreference constructor. Adapt to new length

d4afb9f7 05/03/2019 11:58 AM Patrick Plitzner

ref #8242 Ensure order of TermDTO query

755244f7 05/02/2019 06:06 PM Patrick Plitzner

Fix term creation for multiple representations

13fd7107 05/02/2019 05:56 PM Patrick Plitzner

Add constructor for term type only

f1f3f9e9 05/02/2019 04:07 PM Patrick Plitzner

Fix owl structure tree import test

1f49f91e 05/02/2019 12:41 PM Patrick Plitzner

Rename Owl import/export to StructureTreeOwl import/export

4724d189 04/30/2019 07:47 PM Andreas Kohlbecker

ref #8252 improving ReferenceEllypsisFormatter for print series and proceedings

6efa5535 04/30/2019 04:15 PM Andreas Kohlbecker

ref #8252 improving ReferenceEllypsisFormatter for journals and other references where the main information is in the title

3215b084 04/30/2019 03:05 PM Andreas Kohlbecker

ref #8193 collection setter for TaxonName.status

7d02ee2f 04/30/2019 12:40 PM Andreas Müller

fix #8251 fix property path for FeatureTreeListController

44164d9c 04/30/2019 12:40 PM Andreas Müller

cleanup

11c586f4 04/29/2019 07:15 PM Andreas Müller

minor cleanup

370b41a7 04/29/2019 06:42 PM Andreas Müller

Update OwlImportTest. Use ClearDBDatSet instead of ClearDataSet. Still failing.

464346c5 04/29/2019 04:06 PM Andreas Kohlbecker

removing debuging code line

72312cbc 04/29/2019 04:03 PM Andreas Kohlbecker

ref #7965 methods to get typeDesignationStatusInUse as term an as filter object

71952c4c 04/29/2019 03:48 PM Patrick Plitzner

Fix OWL test package structure

ebc7f626 04/29/2019 02:28 PM Andreas Müller

try to fix test

51c97aab 04/29/2019 02:18 PM Katja Luther

revert changes in PrefKey

f6cdd5da 04/29/2019 01:52 PM Katja Luther

rename getUuidAndTitleCache for namedAreas

11e0d1a5 04/29/2019 12:30 PM Katja Luther

minor

467c872e 04/29/2019 12:20 PM Katja Luther

ref #7920: add predicate for area specicific status

75e53727 04/26/2019 06:33 PM Andreas Kohlbecker

ref #8209 avoiding LIEs when using the ReferenceEllypsisFormatter

6809dc22 04/26/2019 04:47 PM Patrick Plitzner

ref #8248 Add term representations to OWL import and export and test

ae7405db 04/26/2019 04:45 PM Patrick Plitzner

ref #8248 Add constructor for term with a set of representations

49b1f2d4 04/26/2019 12:02 PM Patrick Plitzner

ref #8248 Ready OWL import for taxeditor usage

95b8352b 04/25/2019 02:21 PM Patrick Plitzner

ref #8248 Enhance OWL import

  • Add term URI to import
  • add sources to imported terms
  • create term vocabulary for imported terms
  • check for already existing terms
  • save terms, feature nodes and feature trees to DB
  • update OWL import test with added properties
898b8fa6 04/25/2019 02:18 PM Patrick Plitzner

ref #8248 Add URI to OWL export

21e9de24 04/25/2019 02:17 PM Patrick Plitzner

Fix potential NPE

2336c424 04/25/2019 02:17 PM Patrick Plitzner

ref #8248 Add service method to find terms by URI

dd4e5f4b 04/25/2019 09:10 AM Patrick Plitzner

ref #8248 Implement OWL import test

9f6a7d35 04/25/2019 09:09 AM Patrick Plitzner

Remove limitation for FeatureTree.getDistinctFeatures() to only features

01800302 04/25/2019 08:38 AM Patrick Plitzner

ref #8248 Implement OWL import

  • add more properties to export
  • create complete FeatureTree during import
d1ca5c99 04/24/2019 12:16 PM Patrick Plitzner

ref #8248 Implement OWL import

  • add framework classes
1933a33c 04/24/2019 12:16 PM Patrick Plitzner

ref #8242 Add service method to get all terms for multiple vocabularies

14676ea5 04/24/2019 10:48 AM Katja Luther

getUuidAndTitleCache for namedAreas with voc restriction

130bdaf8 04/23/2019 03:18 PM Andreas Kohlbecker

adding workbench.xmi to ignores

03762d0f 04/18/2019 01:25 PM Patrick Plitzner

ref #8242 Pass list of States to row wrapper

581deb02 04/18/2019 01:24 PM Patrick Plitzner

ref #8242 Add service method to get all terms for a given vocabulary

8c393c2b 04/15/2019 04:19 PM jenkins

Updating develop poms back to pre merge state

ce86a2cd 04/15/2019 04:19 PM jenkins

Merge branch 'master' into develop

08b948de 04/15/2019 04:19 PM jenkins

updating develop poms to master versions to avoid merge conflicts

adf890df 04/15/2019 04:19 PM jenkins

Merge branch 'release/5.6.0'

cae60551 04/15/2019 04:02 PM jenkins

updating poms for branch'release/5.6.0' with non-snapshot versions

b0a2bd43 04/15/2019 03:54 PM Patrick Plitzner

Merge branch 'develop' into release/5.6.0

dfce3d2a 04/15/2019 03:53 PM Patrick Plitzner

ref #7865 Add move message to protected title caches

51bf4258 04/15/2019 03:53 PM Patrick Plitzner

ref #7865 Fix description label generation when moving

e600002d 04/15/2019 03:53 PM Patrick Plitzner

ref #8233 Add barcode and catalog number to clone type service method

96d5c290 04/15/2019 03:53 PM Patrick Plitzner

Revert "ref #7865 Fix titleCache generation when moving taxon descriptions"

This reverts commit 48c401d490b010f21c5e6718263236b99a12d3cb.

6b6f0d91 04/15/2019 03:53 PM Patrick Plitzner

ref #8234 Remove description element when moving it

6b528faf 04/15/2019 03:53 PM Patrick Plitzner

ref #7865 Fix titleCache generation when moving taxon descriptions

842fe776 04/15/2019 03:53 PM Patrick Plitzner

Convert more service methods to only use UUID

  • fix creation service method
20d9726e 04/15/2019 03:53 PM Patrick Plitzner

Convert service methods to only use UUID

dd834f23 04/15/2019 03:53 PM Katja Luther

ref #8124: adapt TaxonNameDescriptionDefaultCacheStrategy

94dd2a5d 04/15/2019 03:53 PM Katja Luther

ref #8088: avoid NPE in saveTaxonNode

3412cfed 04/15/2019 03:53 PM Katja Luther

ref #8096: smaller changes for update caches

abaef8e2 04/15/2019 03:53 PM Katja Luther

add test for adding member to group

3e404885 04/15/2019 03:53 PM Patrick Plitzner

ref #6413 Replace service method parameters with UUIDs

b06cbc98 04/15/2019 03:53 PM Andreas Müller

deprecate isNomenclaturallyRelevant

ad547405 04/15/2019 03:53 PM Andreas Müller

javadoc for DefaultMatchStrategy

acca70b5 04/15/2019 03:53 PM Katja Luther

ref #8088: fix LIE in saveTaxonNode

4e55f365 04/15/2019 03:53 PM Andreas Müller

ref #8153 adapt ColumnAdder and ColumnTypeChanger to handle NOT NULL correctly for auditing tables

c98bdf84 04/15/2019 03:53 PM Andreas Kohlbecker

ref #8189 fallback method for getCdmHomeSubDir() and fixing bug in getCdmHomeDirFallback()

9d2efe36 04/15/2019 03:53 PM Andreas Kohlbecker

ref #8189 fixing invalid NULL check

06374015 04/15/2019 03:53 PM Andreas Kohlbecker

ref #8189 removing useless trailing slashes

6446e75b 04/15/2019 03:53 PM Andreas Kohlbecker

toString() method for RegistrationWorkingSet

2246f50e 04/15/2019 03:53 PM Katja Luther

ref #8115: adapt test

949cf38a 04/15/2019 03:53 PM Katja Luther

ref #7433: add controller method to get dnaSample for given geneticAccessionnumber

cfe73b31 04/15/2019 03:53 PM Katja Luther

ref #8115: do not delete description when moving the last element

69e38fad 04/15/2019 03:53 PM Katja Luther

ref #8096: minor

a310bd6a 04/15/2019 03:53 PM Patrick Plitzner

ref #8190 Fix termType in FeatureNode creation

817222b9 04/15/2019 03:53 PM Katja Luther

ref #7700:smaller changes in TypeDesignationManager (add fide citation)

cbcf7126 04/15/2019 03:53 PM Katja Luther

revert controller method in OccurenceListController

5a8348a3 04/15/2019 03:53 PM Katja Luther

adapt ConfigFileUtils to handle file access without appllication context

f13e7d56 04/15/2019 03:53 PM Katja Luther

ref #7433: add controller method to get dnaSample for given geneticAccessionnumber

1e965c67 04/15/2019 03:53 PM Katja Luther

ref #7515: TypedesignationStatusComparator inherit from OrderedTermComparator

ebd1ecaf 04/15/2019 03:53 PM Andreas Kohlbecker

ref #8189 providing fallback method to retrieve the ~/.cdmLibrary folder without application context

56aa4a44 04/15/2019 03:53 PM Katja Luther

ref #7920: add new predicate for per area status preferences

48c2d522 04/15/2019 03:53 PM Patrick Plitzner

Fix potential NPE

9f74bfb3 04/15/2019 03:53 PM Andreas Kohlbecker

comments and doc for IRegistrationService

56d71c15 04/15/2019 03:53 PM Andreas Kohlbecker

ref #8188 adding empty hibernate.properties for main to satisfy PropertiesFactoryBean in production mode

e25f9c08 04/15/2019 03:53 PM Andreas Kohlbecker

ref #8189 better reporting of error conditions in AbstractWebApplicationConfigurer

905b0c5e 04/15/2019 03:53 PM Andreas Müller

minor

4c066b3c 04/15/2019 03:53 PM Andreas Müller

fix bug in term type check

096053c1 04/15/2019 03:53 PM Andreas Müller

fix term type check in FeatureNode

73ecd0be 04/15/2019 03:53 PM Andreas Müller

Revert "Remove useless check"

This reverts commit 1a4fdfe5c12c655451e25c567f656a8df0f1b9a5.

85c43271 04/15/2019 03:53 PM Andreas Müller

minor changes in TermLoader

94aa8075 04/15/2019 03:53 PM Andreas Kohlbecker

ref #8189 DataSourceConfigurer @Autowiring ConfigFileUtil to init this bean before

e9879222 04/15/2019 03:53 PM Andreas Kohlbecker

ref #8189 DataSourceConfigurer using ConfigFileUtil correctly

429da4fe 04/15/2019 03:53 PM Patrick Plitzner

ref #8190 Fix potential NPE

78e019b6 04/15/2019 03:53 PM Andreas Kohlbecker

ref #8189 cdmlib-remote.properties as not required property source fixes bug introduced in 9b55e525

6d3f348c 04/15/2019 03:53 PM Andreas Kohlbecker

upgrading jetty-maven-plugin to 9.4.15.v20190215

6d27d83c 04/15/2019 03:53 PM Andreas Kohlbecker

ref #8189 removing unnecessary dependency from cdmlib-commons

2ef11fec 04/15/2019 03:53 PM Patrick Plitzner

Remove useless check

2588dae5 04/15/2019 03:53 PM Patrick Plitzner

ref #8190 Allow sub term types for FeatureNode relations and trees

69056744 04/15/2019 03:53 PM Andreas Kohlbecker

ref #8189 ConfigFileUtil as spring bean in deafult context and tests implemented

657ed46c 04/15/2019 03:53 PM Andreas Kohlbecker

ref #8189 moving method getFolderSeperator() back to CdmUtils

98bb24f8 04/15/2019 03:53 PM Andreas Kohlbecker

ref #8189 moving ConfigFileUtil and AccountStore to cdmlib-persistence:eu.etaxonomy.cdm.config

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