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cdmlib / cdmlib-persistence / src @ f08b6366

# Date Author Comment
f08b6366 02/05/2019 03:02 PM Andreas Kohlbecker

ref #8064 ref #7648 autocreation of missing default secRef value in cdm preference model.taxonGraph.secRefUuid/

a53c0e28 02/05/2019 01:38 PM Andreas Kohlbecker

fix #8064 fixing NPE in AbstractHibernateTaxonGraphProcessor.assureSingleTaxon() - taxa may be missing a sec ref

0fca1b39 01/25/2019 02:51 PM Andreas Müller


67118ad4 01/16/2019 09:13 AM Katja Luther

remove generic references from result for inReference selection

fa63b6b4 01/14/2019 06:22 PM Andreas Müller


fa4763c1 01/14/2019 04:51 PM Andreas Kohlbecker

ref #7972 FirstdataInserter adding ROLE_REMOTING to the editor groups

ed596689 01/09/2019 02:38 PM Katja Luther

ref #7903: TaxonNodeDtoNaturalComparator needs to implement Serializable

ea92da24 12/13/2018 02:56 PM Andreas Kohlbecker

fixing wrong boolean operator combination for Restrictions with operator AND_NOT

29e1af1d 12/13/2018 09:19 AM Katja Luther

code cleaning

45cac117 12/07/2018 12:08 PM Katja Luther

ref #7939: add oderInderComnparator and use it in taxonnodeDtoRankAndNameComparator

1312cd94 12/07/2018 12:03 PM Katja Luther

Dto classes for distribution editor

cb9801c1 12/03/2018 10:26 AM Katja Luther

ref #7755: provide all data for specimen pages

b45c1f2d 11/29/2018 01:18 PM Andreas Müller

ref #7932 first implementation of PreferenceResolver and some adaption to PreferenceService API.

  • Correct handling of subtree subjects still open.
  • Also creation of user defined subjects still open.
3986faa0 11/29/2018 01:18 PM Andreas Müller


f81ce9c8 11/28/2018 01:25 PM Andreas Müller

add Identifier to CdmPermissionClass

f2c63453 11/20/2018 05:15 PM Andreas Müller

fix #7915 move datePublished to subinterface IWithAuthorAndDate, remove from IJournal and IPrintSeries this way

37d1c24f 11/13/2018 11:20 AM Patrick Plitzner

ref #7887 Add "parent" DTOs to TermDto

1cac1886 11/13/2018 11:20 AM Patrick Plitzner

ref #7887 Refactor TermDto usage

b9ee0c73 11/13/2018 11:20 AM Patrick Plitzner

ref #7887 Remove getParent()

a1ab6a74 11/09/2018 09:18 AM Patrick Plitzner

ref #7887 Implement term service methods based on DTOs

fbe910aa 11/08/2018 12:20 PM Andreas Müller

ref #7829, ref #7800 improve nom. ref. matcher (also changes the result type => needs adaptation in client Apps)

269cc178 11/08/2018 12:10 PM Andreas Müller

revert: Add series parsing with letters (test) - all unwanted commits

4cab2fd1 11/08/2018 12:04 PM Andreas Müller

Add series parsing with letters (test)

73f51846 11/07/2018 03:51 PM Andreas Kohlbecker

ref #7884 ref #7890 fixing NPE in name controllers

941a7fd0 11/07/2018 12:16 PM Andreas Kohlbecker

ref #7884 ref #7890 fixing LIE in name controllers regarding name relations

2ac69f0c 10/22/2018 05:40 PM Andreas Kohlbecker

ref #7831 using uuids in findTaxonNameParts() methods as name exclude filter

aec3c7b7 10/22/2018 05:06 PM Andreas Kohlbecker

ref #7791 adding rank order index to TaxonGraphNodeDTO

f37e7436 10/18/2018 03:06 PM Andreas Kohlbecker

fix #7834 findInTaxonGraph implemented for Registrations with RegistrationDTOController endpoint

efc5d1e3 10/17/2018 04:16 PM Andreas Kohlbecker

ref #7831 adding name exlude filter to TaxonNamePartsFilter

388fc07c 10/17/2018 12:39 PM Andreas Kohlbecker

ref #7648 fixing bugs related to single taxa per graph and updating rels from lower ranks, with testcase

3f3714e3 10/14/2018 09:45 AM Andreas Müller

ref #7799 compute author caches in deduplicationHelper

644bd633 10/12/2018 06:12 PM Andreas Kohlbecker

ref #7648 adding links to the ticket as preliminary rudimentary documentation

6623206c 10/12/2018 04:57 PM Andreas Kohlbecker

ref #7709 adding missing @CdmHibernateListener config annotation to allow activating the TaxonGraphHibernateListener bean

6c5e8c9a 10/12/2018 12:28 PM Andreas Müller


f528c666 10/11/2018 09:07 AM Andreas Kohlbecker

ref #7648 free configurable TaxonGraphHibernateListener ready

48e27c57 10/10/2018 06:02 PM Andreas Kohlbecker

ref #7648 moving TaxonGraphHibernateListener and related classes into cdmlib-service

f7df0b93 10/10/2018 05:51 PM Andreas Kohlbecker

ref #7648 TaxonGraphHibernateListener as Spring bean configured via the CdmHibernateListenerConfiguration

29b3b816 10/08/2018 08:16 AM Andreas Kohlbecker

commenting createTestDataSet() @Test annotation

11ab88e8 10/05/2018 06:34 PM Andreas Kohlbecker

ref #7648 automatic management of lower ranked names in the taxon graph

4c90f595 10/05/2018 03:59 PM Andreas Kohlbecker

Merge branch 'feature/#7648' into develop
- TaxonGraphDao
- TaxonGraphController
- TaxonGraphService
- TaxonGraphDTO
- TaxonGraphHibernateListener and processor
- tests

19628819 10/05/2018 03:58 PM Andreas Kohlbecker

ref #7648 fixing problems in TaxonGraphTest

91e05af0 10/05/2018 03:23 PM Andreas Kohlbecker

ref #7791 TaxonGraphDao supressing Names associated with Registrations where the status is not PUBLISHED

4c5284df 10/05/2018 02:55 PM Andreas Kohlbecker

ref #7648 moving taxongraph methods from taxonDao to taxonGraphDao

9bdd2739 10/05/2018 02:46 PM Andreas Kohlbecker

ref #7791 TaxonGraphNodeDTO with rank labels

81c01935 10/04/2018 09:44 PM Andreas Kohlbecker

ref #7648 more pulling up into AbstractHibernateTaxonGraphProcessor

75338ad3 10/04/2018 09:09 PM Andreas Kohlbecker

ref #7648 common base class AbstractHibernateTaxonGraphProcessor to deduplicate TaxonGraph methods

9a2d0b71 10/04/2018 08:21 PM Andreas Kohlbecker

ref #7648 allowing to set the TaxonGraphHibernateListener inactive - only for test environments

15d2f2bf 10/04/2018 08:21 PM Andreas Kohlbecker

ref #7648 allowing to set the TaxonGraphHibernateListener inactive - only for test environments

5e4cc7ea 10/04/2018 07:05 PM Andreas Kohlbecker

ref #7648 solving session corruption problems in test suite for TaxonGraphHibernateListenerTest

196c665f 10/04/2018 04:54 PM Andreas Kohlbecker

ref #7648 fixing inconsistency in test data and improving logging

5e403d42 10/04/2018 02:48 PM Andreas Kohlbecker

ref #7791 using name.titleCache as title for TaxonGraphNodeDTO

e8f10d34 10/04/2018 08:33 AM Andreas Müller

adapt CdmPermissionClass

38588c66 10/02/2018 06:42 PM Andreas Kohlbecker

ref #7648 correct handling existing taxa without secReference

335d7c23 10/02/2018 06:16 PM Andreas Kohlbecker

ref #7648 introducing CdmPreferenceLookup for cached access to the CdmProperty with predicate 'TaxonGraphSecRefUuid' and others
- using this Preference in TaxonGraphDaoHibernateImpl and TaxonGraphBeforeTransactionCompleteProcess
- adapting tests accordingly...

6b3c858a 10/02/2018 03:12 PM Andreas Kohlbecker

ref #7648 cleaning up and attempting to fix TaxonGraphService test setup

005f3c40 10/02/2018 12:01 PM Andreas Kohlbecker

ref #7648 all TaxonGraph updating done in a BeforeTransactionCompletionProcess implementation - TaxonGraphHibernateListener is working now

e15e805c 10/01/2018 03:23 PM Andreas Kohlbecker

ref #7648 TaxonGraphService as dao and TaxonGraphObserver as TaxonGraphHibernateListener

e9ca40c5 10/01/2018 11:00 AM Andreas Kohlbecker

ref #7648 TaxonGraphService complete with full set of tests

67861132 09/28/2018 06:55 PM Katja Luther

ref #7345: fix dao method to get entities with special marker and pattern in titleCache

601b8e6e 09/28/2018 06:40 PM Katja Luther

ref #7345: add dao and service methods to get UuidAndTitleCache marked with a special markerType

a8ef58b2 09/28/2018 01:24 PM Andreas Kohlbecker

ref #7648 initial implementation of TaxonGraphService with tests and TaxonGraphObserver

a400c76f 09/28/2018 11:14 AM Andreas Kohlbecker

fix #7795 untilis xml DataSets can optionally be created without "[NULL]" values

b1e975a8 09/28/2018 11:14 AM Andreas Kohlbecker

minor issue with return type of listToTaxonRelationships() fixed

de9f5331 09/25/2018 10:02 AM Andreas Kohlbecker

ref #7783 TaxonNamePart with uuid & assuring registrations have an identifier when saved

1251ffed 09/14/2018 11:24 AM Andreas Müller

ref #7745 childNodesOf implemented

8616c840 09/13/2018 11:05 PM Andreas Müller


8b00105b 09/13/2018 12:00 AM Andreas Müller

ref #7745 add subtree parameter to freetext search methods

d2f1dbf2 09/12/2018 11:01 PM Andreas Müller

ref #7745 fix bug in queries with subtree, some first test and cleanup

bc3200a9 09/12/2018 07:28 PM Andreas Müller

ref #7745 fix syntax for node.treeindex in query

dce01054 09/12/2018 06:52 PM Andreas Müller

ref #7745 subtree filter to taxon search (add missing parameter for queries)

26ab7583 09/12/2018 03:53 PM Andreas Müller

ref #7745 add subtree filter to taxon search (not yet tested for subtree != null)

273b0cdc 09/12/2018 03:46 PM Andreas Kohlbecker

fix #7756 allowig direction to be null again

185155f8 09/12/2018 09:31 AM Andreas Müller

ref #7745 implement subtree filter for ClassificationController.rankSpecificRootNotes and .childNodes

59d36b0c 09/06/2018 01:36 PM Katja Luther

fix bugs in abcd import

370ab182 09/05/2018 09:58 AM Andreas Kohlbecker

avoiding too extensive logging by commenting all hardcoded loglevels

0b9d6dad 09/03/2018 07:54 PM Andreas Müller


0f1cc6a3 08/29/2018 06:31 PM Andreas Kohlbecker

ref #7702 avoiding NPE in TargetEntityStates when pervious state is null

98ce4a92 08/17/2018 03:31 PM Andreas Müller

ref #7664 adapt return type for many methods with defined typification

ef5174f6 08/16/2018 06:47 PM Andreas Müller

ref #6682 try to fix failing query in TaxonDao

5576f79c 08/16/2018 06:15 PM Andreas Müller

ref #6682 try to fix failing query in TaxonDao

a089c5d4 08/16/2018 05:53 PM Andreas Müller

ref #6682 add types and deduplicateMisapplications parameter to web service

a81acd75 08/16/2018 11:43 AM Katja Luther

revert commit ff21181c

d7909683 08/16/2018 12:05 AM Andreas Müller

ref #6682 further fixes for taxon relationship service

e2ba0554 08/15/2018 01:38 PM Katja Luther


a692a96b 08/07/2018 03:01 PM Katja Luther

Merge branch 'develop' into feature/specimenPortal

def2a398 08/03/2018 07:45 PM Andreas Kohlbecker

ref #7590 fixing join types for restriction operations

ff21181c 07/30/2018 12:47 PM Katja Luther


ref #7599: minor

e9ad2b59 07/27/2018 11:15 AM Andreas Kohlbecker

ref #7590 documentation

c696d82c 07/27/2018 08:50 AM Andreas Kohlbecker

ref #7590 replacing not flag in restrictions by AND_NOT and OR_NOT operators

e0dcd1d7 07/27/2018 08:50 AM Andreas Kohlbecker

ref #7590 implementing AND and OR operator for restrictions and harmonizing code

6b53ead8 07/26/2018 12:27 PM Katja Luther

first implementation for specimen page with DTOs

4855bbd5 07/26/2018 12:19 PM Katja Luther

adding new SpecimenOrObservationType and smaller changes

89292507 07/25/2018 07:15 PM Andreas Kohlbecker

ref #7573 adding AGTENTBASE to CdmPermissionClass and creating generic RoleProber

51ee66dc 07/11/2018 03:46 PM Andreas Kohlbecker

fix #7527 making page by parameter with criteria and restrictions available in the service layer

84482875 07/10/2018 12:54 PM Patrick Plitzner

Merge branch 'develop' into aggregation



8f51ee96 07/06/2018 03:10 PM Andreas Kohlbecker

ref #7531 CdmPermissionEvaluator.hasPermission() wraps cdm entities in TargetEntityStates

56e9117c 07/06/2018 02:28 PM Andreas Kohlbecker

ref #7531 RegistrationVoter evaluates previous state on Registration.status changes

72ce5ca1 07/06/2018 01:27 PM Andreas Kohlbecker

ref #7531 intoducing TargetEntityStates to replace plain cdm enities in the permission voting process

7e055a60 07/05/2018 03:42 PM Andreas Kohlbecker

renaming variable

0d707542 07/04/2018 02:53 PM Andreas Kohlbecker

TeamAutoInitializer only loads members for Teams

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