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cdmlib / cdmlib-persistence / src @ 59cb77b4

# Date Author Comment
59cb77b4 08/08/2013 10:55 AM Andreas Müller

minor

65006620 08/08/2013 10:53 AM Andreas Müller

minor

b67a18ce 08/08/2013 10:52 AM Andreas Müller

set termType term updater to literals

a1625f28 08/08/2013 10:52 AM Andreas Müller

schemaupdater for termType

1747fb8f 07/23/2013 02:46 AM Andreas Müller

update update script such that no validation errors exist anymore

5a479f39 07/22/2013 07:03 PM Andreas Müller

change some names in molecular and update the update script

59c2c696 07/22/2013 04:07 PM Andreas Müller

merge trunk to cdm-3.3 branch

a08fca00 07/22/2013 12:33 PM Andreas Müller

some changes to the update script

2083d133 07/21/2013 02:10 AM Andreas Müller

use strings for recordBasis (#2615 und #3544)

99375cb9 07/21/2013 01:56 AM Andreas Müller

use strings for rankClass (#2615 und #3544)

b17af11f 07/21/2013 01:05 AM Andreas Müller

use strings for sourcetypes (#2615 und #3544)

5f9ffdeb 07/19/2013 12:29 AM Andreas Müller

use strings for termtypes (#2615 und #3544)

40368de1 07/18/2013 03:02 PM Cherian Mathew

VocabularyServiceImpl.java, TermVocabularyDaoImpl.java, IVocabularyService.java, ITermVocabularyDao.java : added method (findByTermType) to find all vocabularies related to a particular term type.
TermType.java : Added method (getEmptyDefinedTermBase) to return DefinedTermBase object corresponding to the (this) TermType....

a8541d12 07/14/2013 10:13 PM Andreas Müller

fix test after removing media from specimenOrObservation #3597

bf0b0699 07/14/2013 09:48 PM Andreas Müller

Remove media from SpecimenOrOBseravationBase #3597

c9c6b8e2 07/14/2013 06:18 PM Andreas Müller

add timeperiod to descriptionElementBase #3312

6500a613 07/14/2013 05:27 PM Andreas Müller

javadoc

d47acaf2 07/14/2013 05:04 PM Andreas Müller

update script for genbank accession removal #3552

9fdefe59 07/14/2013 04:51 PM Andreas Müller

update script (first part) for new specimen handling in DescriptionBase #3571

3733052b 07/14/2013 04:44 PM Andreas Müller

update script for new mediaSpecimen attribute #3614

bd07c1ce 07/14/2013 04:36 PM Andreas Müller

remove descriptive system from description base #2202

ace720cf 07/14/2013 04:22 PM Andreas Müller

Add MediaSpecimen (still missing schema updater and tests) #3614

f7678187 07/14/2013 02:53 PM Andreas Müller

first implementation of new molecular package #3360

2f1d893f 07/12/2013 03:57 PM Andreas Müller

minor

60068a72 07/12/2013 03:44 PM Andreas Müller

remove import

32c3be39 07/11/2013 01:02 PM Andreas Müller

implement kindOf for term types #3161

5c88054c 07/08/2013 12:45 PM Andreas Müller

compile fix for updater

71be2731 07/05/2013 04:08 PM Andreas Müller

delete not needed Schema Updater

ff3882c8 07/05/2013 03:45 PM Andreas Müller

Rename RightsTerm -> RightsType #1306

e4ef4d83 07/03/2013 08:07 PM Andreas Müller

add isonym relationship (#2901) and symmetric, transitiv to term updater.

ae736720 07/03/2013 07:02 PM Andreas Müller

add name relationship type "original spelling for" #2874

28923905 07/03/2013 06:14 PM Andreas Müller

implement CDMPreferences #3555

726194ff 07/03/2013 06:08 PM Andreas Müller

implement CDMPreferences #3555

9347564c 07/03/2013 03:53 PM Andreas Müller

Make Specimen - SpecimenDescription one-to-many #3571

cc2a20a3 07/03/2013 12:12 AM Andreas Müller

implement sortIndex for TaxonNode (#3508)

efdb6847 07/03/2013 12:09 AM Andreas Müller

implement sortIndex for TaxonNode and remove usedSynonym from addChildNode methods (#3508)

0f0f606a 07/02/2013 11:02 AM Andreas Müller

make Sequence-PhylogeneticTree ManyToMany (#2540)

cd3908b7 07/02/2013 10:24 AM Andreas Müller

update tests for rename states to stateData #2923

4349acec 07/02/2013 10:15 AM Andreas Müller

renaming CategoricalData.states -> stateData (#2923)

f3dabfca 07/02/2013 10:00 AM Andreas Müller

resizing titleCache and fullTitleCache (#1592) and renaming CategoricalData.states -> stateData (#2923)

289d49ad 06/28/2013 02:05 PM Andreas Müller

move DescriptionElementSource to description package #2345

44a042a1 06/28/2013 01:55 PM Andreas Müller

remove ReferencedMediaBase and Figure, let PhylogeneticTree inherit from Media, remove citation and microcitation columns from DB

d3e523d7 06/28/2013 01:03 PM Andreas Müller

rename FieldObservation -> FieldUnit #3351

c150ee7f 06/28/2013 12:59 PM Andreas Müller

rename FieldObservation -> FieldUnit #3351

483579cd 06/28/2013 11:24 AM Andreas Müller

adding recordBasis to SpecimenOrObservationBase and removing some DerivedUnit classes (all #3378) and adding kindOfUnit to SpecimenOrObservationBase (except for according termType and vocabulary) #3568.

5cd6099e 06/27/2013 03:41 PM Andreas Kohlbecker

implementing missing countDescriptionElementForTaxon method and fixing pager

61c8b7e4 06/27/2013 09:44 AM Andreas Müller

Schema update for startNumber and using startNumber in nodeNumber refresh #3563

f6cb3385 06/26/2013 07:10 PM Andreas Müller

implement start number for PolytomousKeys #2327

717aa7c0 06/26/2013 06:26 PM Andreas Müller

implement abbreviated title for references #1551

00e38709 06/26/2013 04:13 PM Andreas Müller

Updating test data for publish flag (II)

2228e0a7 06/26/2013 03:59 PM Andreas Müller

Updating test data for publish flag (I)

ac43a8e5 06/26/2013 03:12 PM Andreas Müller

implement publish flag for TaxonBase and SpecimenOrObservationBase #1780 (testdata not yet fixed)

a84bf85f 06/26/2013 12:42 PM Andreas Kohlbecker

enhanced filter capabilities for DescriptionElements & a TermBaseListPropertyEditor

481b893b 06/25/2013 07:10 PM Andreas Müller

remove homotypical gorup form type designation base and interface #2173

2308097c 06/25/2013 06:15 PM Andreas Müller

add nom status type "new combination" #3545

cb61174c 06/25/2013 05:46 PM Andreas Müller

added ranks proles, race and sublusus #2793 and updated TermUpdater

456e8082 06/25/2013 04:24 PM Andreas Müller

Sicilia -> Sicily #2766

8c760302 06/25/2013 04:17 PM Andreas Müller

Remove GenBankAccession class, Spatium for EN_DASH and some minor stuff for v3.3

6a5088e0 06/23/2013 03:58 AM Andreas Müller

URIs->CLOBs

ae214cb5 06/21/2013 03:46 PM Andreas Müller

add update step for non unique status

0a9dd700 06/21/2013 03:11 PM Andreas Müller

make Sequence.sequence a clob (#3325)

e680ec65 06/21/2013 02:51 PM Andreas Müller

fix failing distance test

cd0967db 06/21/2013 02:40 PM Andreas Müller

added distanceTo(Ground/WaterSurface)Text -> 1 Test still not running

1eed2be4 06/21/2013 12:43 PM Andreas Müller

merge trunk to 3.3

b88436a0 06/21/2013 12:26 PM Andreas Müller

implement RankClass, remove iso639_2, add max values to distance attributes, change type for distances,

3aee9610 06/21/2013 09:27 AM Andreas Müller

remove backup file

f530b891 06/20/2013 03:48 PM Andreas Müller

make term loader required constructor protected and exchange modifier classes by DefinedTerm

533cbb43 06/20/2013 02:44 PM Andreas Müller

exchange modifier classes by DefinedTerm, add termtype to csv files, make term loader required constructor private

e3916e80 06/19/2013 06:26 PM Andreas Müller

fix handling of iso639_2 (add vocabulary check)

1d728279 06/19/2013 06:05 PM Andreas Müller

remove deprecate constructor call in TestingTermInitializer

a4f5b3bc 06/19/2013 05:18 PM Andreas Müller

remove TdwgArea and add termType and idInVocabulary (#2998, #3478, #3479, #3539) in persistence

904cec73 06/19/2013 05:10 PM Andreas Müller

remove import

09da3eb2 06/13/2013 02:59 PM Andreas Kohlbecker

optimizing memory consumption of massindexer and catching data related exceptions

31a337e2 06/13/2013 12:51 PM Andreas Müller

added term type to test terms

c1b9474e 06/11/2013 06:37 PM Andreas Müller

update updated script and some other changes

0365fb40 06/07/2013 01:13 PM Andreas Müller

changes for absoluteElevation #2663, treeIndex (TaxonNode) #2947 and source type #1549

640937e9 06/07/2013 01:15 AM Andreas Müller

fix bugs and adapt tests for original source type

9c1fdb4f 06/06/2013 05:08 PM Andreas Müller

add original source type #1549

fad74844 06/06/2013 04:17 PM Andreas Müller

update factory methods for original sources #1549

9f840a1e 06/06/2013 01:52 PM Andreas Müller

Merge trunk into CDM 3.3

897c420b 06/06/2013 01:43 PM Andreas Müller

add original source type #1549 and adding taxon node tree index

3ea8f17c 06/05/2013 10:49 AM Cherian Mathew

workaround for the fact that hql is not able to parse boolean literals in the select list clause.

84a062ce 05/15/2013 10:11 AM Andreas Müller

add updater for cdm 3.3

c387fa8c 04/25/2013 12:18 PM Andreas Kohlbecker

minor

4842b4bc 04/23/2013 04:25 PM Andreas Müller

update ReferenceFactory method

fe7cb576 04/23/2013 04:17 PM Andreas Müller

update ReferenceFactory method

552c2aed 04/23/2013 04:04 PM Andreas Müller

update ReferenceFactory method

8d4416bf 04/23/2013 04:01 PM Andreas Müller

update ReferenceFactory method

1eafe2db 04/18/2013 04:34 PM Andreas Müller

move ProfilerController to cdmlib-persistence-test

903a6914 04/18/2013 01:33 PM Andreas Kohlbecker

marker.markerType always initialized and serialized

dba75be8 04/18/2013 01:32 PM Andreas Kohlbecker

Improvements to TransmissionEngineDistribution, basic monitoring added and new service and dao methods for pageRankSpecificRootNodes()

d28237dc 04/18/2013 01:32 PM Andreas Kohlbecker

adding missing @Override

17db482c 04/13/2013 01:26 PM Andreas Müller

upgrade some spring.hibernate3 dependencies to spring.hibernate4 and deprecate AlternativeSpellingSuggesionParser

74e230f7 04/11/2013 12:14 PM Andreas Kohlbecker

fixing generics in CdmPermissionVoter

66fc352a 04/10/2013 03:35 PM Andreas Müller

fix spring security version and some other minor dependency issues

70cb6333 04/10/2013 01:58 AM Andreas Müller

update Xerces to 2.11.0 and fix some other dependencies / and remove commented dependencies

82d66edf 04/09/2013 08:15 PM Andreas Müller

merge trunk to hibernate4

06ec599a 04/09/2013 01:02 PM Andreas Müller

bugfix für list type

64f58fa0 04/09/2013 12:54 PM Cherian Mathew

Updated existing tests to add '[]' around CRUD values

d2804b99 04/09/2013 12:51 PM Cherian Mathew

CdmAuthority : Changed regex to allow for CRUD operation values to be surrounded by '[]'
Operation : Updated to parse multiple, comma-separated CRUD values

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