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cdmlib / cdmlib-persistence / src / main / java @ 55dd353b

# Date Author Comment
55dd353b 01/30/2017 08:50 PM Andreas Müller

ref #6362 remove further occurrences of NonViralName

fe34a9eb 01/30/2017 11:07 AM Andreas Müller

ref #6365 use TaxonNameFactory for botanical names

033fa0b2 01/30/2017 10:56 AM Andreas Müller

ref #6365 use TaxonNameFactory for zoological names

6369aae2 01/30/2017 10:45 AM Andreas Müller

fix #6364 use TaxonNameFactory for viral and bacterial names

174ae83b 01/30/2017 10:38 AM Andreas Müller

fix #6366 use TaxonNameFactory for cultivar names

2d370ced 01/30/2017 12:24 AM Andreas Müller

ref #6366 move cultivar attributes and functions to TaxonNameBase

da39aca0 01/30/2017 12:24 AM Andreas Müller

ref #6365 merge static methods from BotanicaName to TaxonNameBase

8eea91a5 01/30/2017 12:24 AM Andreas Müller

ref #6365 Move all ZoologicalName attributes up to TaxonNameBase

536aae8b 01/30/2017 12:24 AM Andreas Müller

ref #6364 Move all BacterialName attributes up to TaxonNameBase

a4c9dfc9 01/26/2017 04:00 PM Andreas Müller

ref #6362 removed some NonViralName occurrences (non-compiling as changing in model are still missing)

682caf2f 01/25/2017 12:54 PM Andreas Kohlbecker

Revert "Revert "fix #6360 moved all NonViralName functionality to TaxonNameBase""

This reverts commit 9b9d0a956d78e3aec1024bc0a5fa33f33e5b33aa.

edc792d8 01/25/2017 12:51 PM Andreas Müller

minor

9b9d0a95 01/24/2017 01:38 PM Andreas Kohlbecker

Revert "fix #6360 moved all NonViralName functionality to TaxonNameBase"

This reverts commit 7d8c96134bda3c11d053df2e8e5d03f32a500ee3.

be36c37f 01/23/2017 02:15 PM Andreas Kohlbecker

fix #6373 fixing MediaAutoInitializer

c616b466 01/23/2017 01:53 PM Katja Luther

revert last minor change in misapplied name search

bf021c7c 01/23/2017 01:35 PM Katja Luther

minor

a6f0466b 01/23/2017 01:03 PM Katja Luther

fix tests

177a283a 01/23/2017 12:06 PM Katja Luther

fix #6296: fix the parameter settings in search queries

7d8c9613 01/21/2017 11:28 AM Andreas Müller

fix #6360 moved all NonViralName functionality to TaxonNameBase

c4f7a205 01/20/2017 01:01 PM Katja Luther

fix #6296: fix problems for simple search

0fc610dc 01/20/2017 10:13 AM Katja Luther

add test for different search combinations

7304d345 01/20/2017 09:24 AM Katja Luther

fixed copy paste error for common name search

3d654cd3 01/19/2017 10:35 AM Katja Luther

fix #6342: fix exception for ? in selection dialog

c2c05353 01/10/2017 09:34 AM Katja Luther

some code cleaning

06bf3273 01/09/2017 11:11 PM Andreas Müller

fix #3465 Progressmonitor API and better UpdateResult handling for setSecundumForSubtree

d1382189 01/09/2017 03:46 PM Katja Luther

ref #6296: minor

d841fb5d 01/09/2017 03:39 PM Katja Luther

ref #6296: minor

8311a989 01/09/2017 03:11 PM Katja Luther

fix #6296: include the common name search into the search query of taxa and synonyms

d97ab2bf 01/07/2017 12:03 AM Andreas Müller

fix #3465 implement setSecundumForSubtree

82bf3f79 01/03/2017 09:57 AM Katja Luther

fix #6299: add openSession in getSession when there is no current session

68a19847 12/20/2016 01:16 PM Katja Luther

minot

d45008d0 12/20/2016 11:49 AM Andreas Kohlbecker

ref #6190 removing svn property place holder in first line of code

43d3d0b7 12/13/2016 12:45 PM Katja Luther

minor

33525203 12/13/2016 12:25 PM Katja Luther

minor

3977b110 12/12/2016 02:27 PM Katja Luther

fix #6274: add an update for childrenCount cache if count of children not the same as the cache

6a3f4c50 12/08/2016 11:34 AM Katja Luther

ref #4766: prepair the sortindex updater for calling via IOService

b08f6086 12/07/2016 03:01 PM Andreas Müller

Cleanup and new Rights Factory method

503d9f4c 12/05/2016 02:55 PM Andreas Müller

fix SortIndexUpdater bug for missing @id replacement

077e258b 12/05/2016 08:11 AM Andreas Müller

fix #6135 allow nameCache for merked taxa search

57ef2f9d 12/02/2016 10:12 PM Andreas Müller

fix #6236 add alphabetic length ordering to name search

e3fc5af3 12/02/2016 04:31 PM Andreas Müller

fix #6134 add group taxa by marker and refactor treeindex handling

05c87b75 12/02/2016 10:11 AM Andreas Müller

fix #6128 include authorship option in taxon and name search

f08f6894 12/02/2016 10:04 AM Andreas Müller

Cleanup and replace int by long in count

f3d4c9bc 11/23/2016 01:20 PM Andreas Müller

Fix proparte is null in update script

c1bd6833 11/23/2016 01:19 PM Andreas Müller

cleanup

48e61436 11/22/2016 05:32 PM Andreas Müller

fix sortindex updater and SynonymDeduplicator

ea2e509b 11/18/2016 10:22 PM Andreas Müller

Cleanup

060676fe 11/18/2016 08:05 PM Katja Luther

solving polytomouskey node sort index problems

b6ee6df4 11/15/2016 12:23 PM Andreas Müller

fix #6200 Change order of NomenclaturalCodeUpdater and allowOverride adder to avoid null values

b7c0b206 11/15/2016 11:07 AM Andreas Müller

cleanup and javadoc

93ad47c4 11/15/2016 11:07 AM Andreas Müller

ref #5976 add PKNode sortindex update

45844ac2 11/15/2016 08:45 AM Andreas Müller

ref #5974 fix update script for synonym duplicates

eaf29c2e 11/15/2016 08:43 AM Andreas Müller

cleanup

ceb3e3f3 11/11/2016 01:12 PM Andreas Müller

ref #3925 and #5974 Improve update script for non unique subqueries

4b6abd7e 11/04/2016 02:08 PM Andreas Müller

Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop

Conflicts:
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/ITaxonNodeService.java

87f819cf 11/03/2016 10:12 AM Patrick Plitzner

ref #5458 Add classification filter to service method

4103187a 11/01/2016 04:41 PM Patrick Plitzner

ref #5458 Added find-by-titleCache method for taxon node service

100e37d9 10/26/2016 11:09 AM Patrick Plitzner

ref #2380 Implement service for getting parent of
UuidAndTitleCache

  • parent of either ITaxonTree or UuidAndTitleCache can be retrieved
  • added JUnit test and test file
321a37d1 10/25/2016 04:52 PM Patrick Plitzner

ref #2380 Implement service for getting children of
UuidAndTitleCache

  • direct children of either ITaxonTree or UuidAndTitleCache can be retrieved
  • added JUnit test
15566c6f 10/21/2016 04:45 PM Andreas Müller

ref #5974 implement substitute method for TaxonService.getAllRelationships

42ae65a2 10/21/2016 02:47 PM Andreas Müller

Cleanup merge model 4.1/develop

4dea3eee 10/20/2016 04:04 PM Andreas Müller

Merge remote-tracking branch 'origin/develop' into develop

Conflicts:
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/TaxonNode.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonDaoHibernateImpl.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/TaxonNodeServiceImpl.java...

7ae6b88e 10/20/2016 11:44 AM Katja Luther

minor

b72cb56a 10/18/2016 07:31 PM Andreas Müller

remaining merge issue for morge develop to cdm4.1

aabd8c12 10/18/2016 06:52 PM Andreas Müller

Merge remote-tracking branch 'origin/develop' into cdm-4.1

Conflicts:
cdmlib-db/pom.xml
cdmlib-ext/pom.xml
cdmlib-io/pom.xml
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/taxa/NormalExplicitImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/SpecimenImportBase.java...

1e55f5c2 10/18/2016 05:51 PM Andreas Müller

fix #5634 Update excluded/unplaced for TaxonNodes with no taxon_id

d7fa3e13 10/18/2016 04:53 PM Andreas Müller

fix #5974 fix moving synonym type to TaxonBase and SynonymRelationType label

b362a2c0 10/18/2016 02:15 PM Andreas Müller

ref #5952 Add index to identityCache

3f43c155 10/18/2016 02:14 PM Andreas Müller

cleanup

4bfde47a 10/18/2016 02:13 PM Andreas Müller

ref #3658 further improvements for NomCode update

45c1a780 10/18/2016 02:11 PM Andreas Müller

#5634 Add excludedNote to TaxonNode (still some tests not running)

1402e210 10/18/2016 02:07 PM Andreas Müller

ref #3925 Adapt tests for moving unplaced and excluded

08a698af 10/18/2016 10:29 AM Katja Luther

ref #6099: removing cascading to child nodes and adapting the service and persistence layer

4229bb22 10/14/2016 05:10 PM Andreas Müller

ref #5826 adapt update script

745b0cdf 10/14/2016 04:16 PM Andreas Müller

Correct errors in update script

98053545 10/14/2016 04:13 PM Andreas Müller

ref #3925 Move excluded and unplaced to TaxonNode

60dd84cb 10/13/2016 11:54 PM Andreas Müller

fix #5952 Add identityCache

7e03e21e 10/13/2016 04:59 PM Andreas Müller

fix #5952 Add fieldNumberCache

bcdf42bc 10/13/2016 04:23 PM Andreas Müller

fix #5981 Add abbreviation to Rank "Cultivar"

c0248cde 10/13/2016 01:14 PM Andreas Müller

ref #3658 remove nomenclaturalCode from all datasource related classes

  • and rename NomenclaturalCodeAwareDataSource
4b36c12a 10/13/2016 11:57 AM Andreas Müller

ref #3658 Update nomenclatural code as CdmPreference (most probable value)

5dc46163 10/13/2016 11:52 AM Andreas Müller

cleanup

cb96157e 10/13/2016 11:52 AM Andreas Müller

ref #3658 Update nomenclatural code as CdmPreference (most probable value)

152fcd76 10/13/2016 11:09 AM Andreas Müller

ref #5974 Replace synonym relationship update scripts (untested)

066c9dde 10/13/2016 11:09 AM Andreas Müller

clean up and java doc

fbeefcaf 10/13/2016 09:58 AM Andreas Müller

ref #5974 Replace synonymRelationshipType by SynonymType and replace some other occurrences of synonym relationship

f476ff86 10/12/2016 09:00 PM Andreas Müller

ref #5974 Remove synonym relationship first compiling implementation in cdmlib

683f6ce0 10/07/2016 03:11 PM Katja Luther

ref #5972: add method to count referencing objects

30451d3c 10/07/2016 11:22 AM Andreas Müller

fix #6089 Remove taxonomicParentCache and taxonomicChildrenCount from Taxon

40812151 10/07/2016 10:53 AM Andreas Müller

fix #6122 add titleCache service

c6af6a3d 10/07/2016 10:53 AM Andreas Müller

fix #6120 Cleanup uuidAndTitleCache methods

d8c4f8b9 10/07/2016 10:23 AM Andreas Müller

ref #6065 Handle synonyms in taxonInContext

d17b9e90 10/07/2016 10:23 AM Andreas Müller

ref #6065 first implementation of taxonInContext service

b296585f 10/07/2016 10:23 AM Andreas Müller

ref #6066 add getChildNodes to classification service

87e6bb6f 10/07/2016 10:23 AM Andreas Kohlbecker

ref #6087 adding orderINdex to TermDTO

38b82688 10/07/2016 10:23 AM Katja Luther

fix #6061: search in titlecache and nomenclatural titleCache in getUuidAndAbbrevTitleCache

1e8a54ff 10/07/2016 10:23 AM Andreas Müller

fix #6072 Implement findIdentifiableEntityByMarkers

e5605065 10/07/2016 10:23 AM Andreas Müller

ref #6089 Remove all calls and methods for taxonomicChildrenCount and taxonomicParentCache

19ef2a42 10/07/2016 10:23 AM Andreas Müller

fix #6066 Implement doPageChildNodes with doSynonyms

7258c318 10/07/2016 10:23 AM Katja Luther

fix #5837: search on abbrevTitleCache instead of abbrev title

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