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cdmlib / cdmlib-model / src / main / java / eu / etaxonomy @ bdd00895

# Date Author Comment
bdd00895 07/09/2014 03:41 PM Andreas Müller

remove (bot.) for name creation in botanical names of rank section #4122 and #4279

c20a343c 07/09/2014 03:19 PM Andreas Müller

fix failing single model test due to new MockCdmCacher

ed0e00d0 07/08/2014 10:19 AM Andreas Müller

minor

fb7c2911 07/02/2014 05:57 PM Andreas Müller

create new vocabulary for MediaSpecimenKindOfUnit, move Detail image and Specimen scan from old to new vocabulary and create new terms Living plant photo and Artwork #4269

9ef7b6ea 07/02/2014 04:16 PM Andreas Müller

fixing #4278 for FeatureNode

29f176f5 07/02/2014 04:11 PM Andreas Müller

fixing #4278 for PolytomousKeys

df879c1f 07/02/2014 03:42 PM Andreas Müller

alternative for protected: deproxy #4200

c40252b2 07/02/2014 03:17 PM Andreas Müller

cleaning up TaxonNode class and also refactoring solution for #4200

61380896 07/02/2014 10:46 AM Andreas Müller

fixing sortindex issue #4200

2a678241 07/02/2014 10:45 AM Andreas Müller

minor

6f121a67 06/30/2014 06:04 PM Andreas Müller

convenience access for new kindOfUnit uuids #4269

93f50b5e 06/25/2014 04:32 PM Cherian Mathew

First commit for the CDM Caching api
ICdmCacher, CdmCacher : CDM Cache class based on Ehcache
defaultApplicationContext.xml : added cache package to be component scanned
DefinedTermBase : new set/getCdmCacher method to make cacher available to term classes...

221619fa 06/23/2014 01:15 PM Andreas Müller

minor

28409aeb 06/18/2014 05:53 PM Andreas Müller

javadoc

cc57dbe5 06/13/2014 11:46 AM Andreas Müller

start bugfixing and refactoring sortindex handling in TaxonNode

37baacf3 06/11/2014 04:22 PM Patrick Plitzner
  • added null check
e44dd689 06/07/2014 03:45 PM Andreas Müller

allow zoonames with year behind whitespace, not comma

5dd077cf 06/06/2014 03:55 PM Andreas Müller

fix matching for Integer #4229

346f3a9d 06/03/2014 06:09 PM Andreas Müller

fix "Error occurred when trying retrieve title for Named Area"

e2ebeba0 06/03/2014 04:35 PM Patrick Plitzner
7e1ef8ec 06/02/2014 06:53 PM Andreas Müller

fix for TaxonComparatorSearch

0062b549 05/29/2014 01:34 AM Andreas Müller

improve to better fulfill the Comparator contract

cccbf120 05/29/2014 01:21 AM Andreas Müller

improve to better fulfill the Comparator contract

f215d86d 05/29/2014 01:10 AM Andreas Müller

improve TaxonComparator to better fulfill the general Comparator contract.

90ec47d5 05/29/2014 12:35 AM Andreas Müller

further improve comparator contract implementation for TaxonComparatorSearch #4230

86c333fb 05/28/2014 07:46 PM Andreas Müller

remove logging

120d9f0f 05/28/2014 07:45 PM Andreas Müller

fixing #4230, comparison issue

9e7a4fe8 05/16/2014 02:10 PM Andreas Müller

null handling for taxon names in nomSortOrderBrdige

92e1856d 05/15/2014 06:22 PM Andreas Müller

serial Version ID for HomGroup

1267f8b4 05/15/2014 01:39 PM Andreas Müller

better handling NewInstance in DerivedUnit

072bdb69 05/15/2014 12:58 PM Katja Luther

set getDescendants back to protected, remove @transient

7fa63671 05/14/2014 11:42 AM Cherian Mathew

adding transient annotaion so that it is ignored in serializing

8e86263f 05/14/2014 09:15 AM Patrick Plitzner
  • made move methods session-safe by reloading the cdm entities
    • enhanced/added test
    • made constructor of PreservationMethod protected to avoid JavaAssistEnhancementException
cc3556cd 05/13/2014 12:44 PM Katja Luther

set getDescendants() public

a10163ea 05/09/2014 11:03 AM Andreas Müller

fixing bug for missing reference type

60d8ad91 05/09/2014 10:24 AM Andreas Müller

implement cache strategy for section references and remove generics from reference cache strategies.

70c786d3 05/08/2014 11:36 AM Andreas Müller

Add preliminary SectionCacheStrategy and remove generics from reference cache strategies

69f27baa 05/07/2014 10:23 AM Andreas Müller

adding Gazetteer to ReferenceSystem

00bbb5f4 05/06/2014 03:49 PM Andreas Müller

fix for loading continents correctly

b5157670 04/23/2014 01:43 PM Patrick Plitzner
  • added cascade saving to PreservationMethod of DerivedUnit
f160e5a4 04/10/2014 02:17 PM Andreas Müller

log childIndex is null

6bf0ea8f 04/10/2014 02:16 PM Andreas Müller

fix logging for taxa used multiple times in addParentChild

13d17320 04/01/2014 08:50 AM Patrick Plitzner
  • added two NewInstance() methods to Amplification
    • added getUuidAndDescriptions to IAmplificationService and DAO
8640593e 03/31/2014 12:25 PM Katja Luther

add tests for treeIndex and deletion of nodes

73ee5c85 03/27/2014 01:02 PM Andreas Kohlbecker

renaming protected setter to setStateData, see #2923 (Rename CategoricalData.states collection to stateData)

70d6b08b 03/25/2014 05:01 PM Patrick Plitzner
  • added removeSingleRead() method to Amplification
3b98b0db 03/20/2014 01:50 PM Katja Luther

#4114 sort order in taxon navigator and adding that autonyms could be whether infraspecific or infrageneric (Art. 22.3 and 26.3)

0f24bfe5 03/17/2014 01:30 PM Katja Luther

fix compareTo for IdentifiableEntity

f295355d 03/17/2014 09:36 AM Patrick Plitzner
  • added reference to trac ticket
c09b4938 03/17/2014 08:53 AM Patrick Plitzner
43e4bbeb 03/17/2014 08:52 AM Patrick Plitzner
  • fixed a bug in the automated setting of the string length
4bdeb27e 03/15/2014 02:36 AM Andreas Müller

fix missing idInVocabulary for countries; implement country mapping for EditGeoService (#3452, #3651)

64fddb1b 03/14/2014 09:52 PM Andreas Müller

add NomStatus vocabulary for ICZN #4085

9f86020d 03/14/2014 08:46 PM Andreas Müller

Added IsoParaType to SpecimenTypeDesignationStatus

3d03a83f 03/13/2014 01:22 PM Andreas Kohlbecker

implementing test and fixing bugs regarding #4081 (TaxonNodeServiceImpl.makeTaxonNodeASynonymOfAnotherTaxonNode() requires TAXONNAMEBASE.[UPDATE])

a80ab4d7 03/13/2014 01:15 PM Cherian Mathew

changed isTopmostNode to check for null parent node taxon

c14fc0ed 03/07/2014 08:55 PM Andreas Müller

Add database index on treeIndex #4105

e28e4b81 03/07/2014 06:33 PM Andreas Müller

minor

666b484a 03/07/2014 06:30 PM Andreas Müller

improve TaxonCacheStrategy. Use short form where possible

0df84d71 03/07/2014 05:36 PM Andreas Kohlbecker

making TaxonNodeByNameComparator truely null save - #2912 (NPE in TaxonNodeByNameComparator when Taxon in TaxoNode is null)

5624baa1 03/07/2014 02:31 PM Andreas Müller

minor

7492ea45 03/07/2014 01:42 PM Andreas Müller

solving some reference cache strategy issues, e.g. #3645

e0d2c312 03/07/2014 01:03 PM Andreas Müller

adding isBlank to StrategyBase

47af76e8 03/07/2014 12:35 PM Andreas Müller

minor

04cfb800 03/07/2014 12:32 PM Andreas Müller

Better handling for short citation of references

7a3f759c 03/06/2014 01:46 AM Andreas Müller

minor and generics

e84380bd 03/05/2014 03:28 PM Patrick Plitzner
  • added cascading save to SequenceString of a Sequence
ec766423 03/04/2014 09:20 AM Patrick Plitzner
  • added cascading save for contig file of Sequence
824432c0 03/03/2014 09:48 AM Patrick Plitzner
  • added cascading save to pherogram (Media) of SingleRead
    • added media section to DetailsViews for Amplification (gel photo) and SingelRead (pherogram)
0ad365ec 02/28/2014 11:45 AM Andreas Kohlbecker

implementing #4082 (implement default permission groups)

35c1196a 02/27/2014 09:41 AM Katja Luther

fix problem with changeSynonymToAcceptedTaxon of a synonym being part of an homotypical group

29761877 02/26/2014 09:22 PM Andreas Müller

improve author parsing

899d760b 02/21/2014 10:33 PM Andreas Müller

toString for Reference

6388be87 02/21/2014 10:32 PM Andreas Müller

minor

a6304a40 02/14/2014 05:47 PM Andreas Müller

minor

a258326e 02/14/2014 05:46 PM Andreas Müller

correct generics for classification

6e861bce 02/14/2014 05:37 PM Andreas Müller

make description.setTaxon protected and cleanup cyprus altitudes and destinations

1477640f 02/10/2014 07:21 PM Andreas Kohlbecker

User.getAuthorities() made public as preliminary solution to #4053 (Transient field User.authorities not refreshed on reloading entity)

e477386c 02/06/2014 03:21 PM Andreas Kohlbecker

part 1 of fixing #2414 (Group updating doesn't work) by using CascaseType.REFRESH and test method extended

c423c274 02/06/2014 03:21 PM Andreas Kohlbecker

fixing and implementing test for #3782 (Security Context is not updated after editing GrantedAuthorities of a Group)

5a845253 01/31/2014 04:59 PM Andreas Kohlbecker

implementing global PUBLISH role, also introducing the interface IPublishable; solves #3980 (Implement PUBLISH role into cdmlib security)

a1164d98 01/30/2014 03:25 PM Katja Luther

adapt delete of rootnodes

7c01e338 01/29/2014 08:43 PM Andreas Müller

minor

87cab9c5 01/29/2014 08:41 PM Andreas Müller

Set setTitleCache to deprecated and add javadoc

918c7105 01/29/2014 02:21 PM Andreas Müller

minor

91e01be2 01/29/2014 02:20 PM Andreas Müller

add some listeners commented code for Reference class to handle abbrevTitleCache refresh later on

f309cb4c 01/29/2014 10:33 AM Andreas Kohlbecker

code cosmetics

73ffb191 01/28/2014 02:12 PM Andreas Müller

minor

1f6e6fdc 01/24/2014 03:50 PM Andreas Müller

making boolean methods in TaggedText all Transient #3991

a537f285 01/20/2014 04:48 PM Andreas Kohlbecker

fixing hibernate search annotation

856a4fee 01/15/2014 12:54 PM Andreas Kohlbecker

fixing problems related to new taxon node structure

acfdcc30 01/14/2014 10:08 PM Andreas Müller

remove publish marker from synonyms #3883

30c8f3d6 01/14/2014 09:41 PM Andreas Müller

remove uri from feature tree #3519

6f00d6f6 01/14/2014 09:28 PM Andreas Müller

add unknownData to structured descriptive data #2975

46008e60 01/14/2014 08:50 PM Andreas Müller

schema update to 3.3.1

cf979fb7 01/14/2014 07:36 PM Andreas Müller

minor

5d00156f 01/14/2014 06:07 PM Andreas Müller

Fixing some test for new Classification structure in cdmlib-model

c93bf342 01/14/2014 03:47 PM Katja Luther

rootNode adaption for classification

9d9feae4 01/14/2014 02:10 PM Patrick Plitzner
c0ab9eed 01/14/2014 11:04 AM Andreas Müller

again bugfix for DNA URLs

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