Edit

Adapt test dataset loading to standard path

Remove bidirectionality for supplemental data #5743

resolving conflicts after merge of ticket_4716 into develop

organizing imports

Upgrade to spring 4.2.2, spring-security 4.0.2 and latest hibernate
validator #4716 and #4702

Refactored import return type from boolean to ImportResult

Add new test for name parsing

Fix UniqueKey issue for sequence ciations

Add new GGBN import test

Fix classification handling for new and exisiting taxa

Test classification handling

Remove unneccessary check

Add test for importing two dna units with associated units

Test import of sparse ABCD file

Split up test for unit associations

Import associated units

• Set derivation event correctly
• adapted test

Import associated units in ABCD import

Worked on the order of importing units especially when associated units
are present.
Adapted test.

Import associated units in ABCD import

First changes

• refactored dna parsing
  • added utility classes and person parser
  • adapted test
  • added parsing of more molecular parameters

• added test for "ignoreAuthorship" option

• added test to ignore because data base conflicts for later tests

• added more ggbn ABCD parameters to import and test

cleanup code

set failing test to ignore

clean up old AbcdImport test #3279

minor

• implemented importing of DNA ABCD units
  • DNA sampled will be attached to already existing specimens
  • re-enabled tests

• re-enabled and fixed ABCD import tests(#4910)

• reverted temporary changes for titleCache generation

• added new test cases (still temporarily @Ignore)

• enhanced ggbn parsing
  • enhanced report

• added test to ignore temporarily

• added @Ignore to failing test -_-

add xslx test in io

• change visibility of createTestDataSet to public

• added abstract method createTestData() to CdmIntegrationalTest
  • method should be used for generatin test XML data sets
  • making it abstract and enforcing implementation in sub classes ensures that the same structure is used thus making it easier for the developer to find similar examples....

• extended init test

rename Reference.authorTeam -> authorship #4432

adapt tests to 3.4

adapted tcs rdf and xml import, using apache jena for rdf import
tcs import for caryophylales
minor

Ignore new Specimen Test as it fails to run in suite

-added CleanSweepInsertLoadStrategy to fix failing test

fixing bug for missing reference type

renaming CdmApplicationController to CdmApplicationDefaultController

minor changes (remove logging of missing classification)

handle name cache in normal explicit import

change DescriptionBase.descriptionElements to DescriptionBase.elements #3841

reintegrate branch patricia into trunk

minor