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cdmlib / cdmlib-io / src / main / java / eu / etaxonomy @ 22d2dd81

# Date Author Comment
22d2dd81 03/15/2017 10:52 AM Katja Luther

use remotingProgressMonitor for setSecundumReferenceForSubtree

f8009036 03/14/2017 09:12 AM Katja Luther

minor

4ed92181 03/13/2017 03:18 PM Katja Luther

smaller changes in DwC-A Export

3c6ba3cd 03/09/2017 04:20 PM Andreas Müller

fix #6459 Implement deduplication for IntextReferences

144952dc 03/03/2017 02:10 PM Andreas Müller

cleanup

43b500aa 03/01/2017 01:06 PM Andreas Müller

ref #6440 fix most of the IPNI name service issues

530a12a5 02/26/2017 11:11 AM Andreas Müller

ref #6410 latest changes for eFlora (FM 15) import

133d0005 02/26/2017 11:05 AM Andreas Müller

cleanup

cb4b3b25 02/26/2017 10:50 AM Andreas Müller

ref #6410 handle hybridClass attribute

37180104 02/23/2017 10:24 AM Katja Luther

fix excel import from editor

a9aabce2 02/17/2017 10:39 AM Andreas Müller

ref #6406 revert MarkupTransformer temporarily to allow compilation

480e8ef4 02/17/2017 10:29 AM Andreas Müller

ref #6410 fix markup compile issues

a3e316c8 02/17/2017 10:29 AM Andreas Müller

ref #6419 some remaining CdmRepository issues

7e5b7051 02/17/2017 10:09 AM Andreas Müller

ref #6410 Latest changes to Markup import

c47e320c 02/16/2017 10:35 PM Andreas Müller

cleanup

f8b4b762 02/16/2017 10:35 PM Andreas Müller

Cleanup

41356809 02/15/2017 09:55 AM Andreas Kohlbecker

ref #6419 renaming ICdmApplicationDefaultConfiguration to ICdmRepository

be652f06 02/14/2017 10:01 AM Andreas Kohlbecker

fix #6419 renaming CdmApplicationDefaultConfiguration to CdmRepository

3e6e1b76 02/10/2017 11:36 AM Andreas Müller

ref #6410 latest changes to Markup import to match Nepenthaceae import

96afcf2f 02/10/2017 11:36 AM Andreas Müller

cleanup

7cdc874a 02/06/2017 10:09 AM Katja Luther

changes in specimen import

67193ea6 02/04/2017 10:35 AM Andreas Müller

ref #6410 Nepenthaceae, handle known collections, issues and fulldates

d7919b1c 02/03/2017 01:44 PM Andreas Müller

ref #6362, ref #6365 remove occurrence of NonViralName, BotanicalName, ZoologicalName and others

5adaf480 02/03/2017 10:52 AM Patrick Plitzner

fix #6408 Fix potential NPE in AbcdParseUtility

f0aff81a 02/02/2017 01:29 AM Andreas Müller

ref #6401 temporarily remove uuids from MarkupTransformer to allow compiling

55dd353b 01/30/2017 08:50 PM Andreas Müller

ref #6362 remove further occurrences of NonViralName

fe34a9eb 01/30/2017 11:07 AM Andreas Müller

ref #6365 use TaxonNameFactory for botanical names

033fa0b2 01/30/2017 10:56 AM Andreas Müller

ref #6365 use TaxonNameFactory for zoological names

df5738fe 01/30/2017 10:52 AM Andreas Müller

fix #6360 use TaxonNameFactory for NonViralNames

6369aae2 01/30/2017 10:45 AM Andreas Müller

fix #6364 use TaxonNameFactory for viral and bacterial names

174ae83b 01/30/2017 10:38 AM Andreas Müller

fix #6366 use TaxonNameFactory for cultivar names

396a8759 01/30/2017 12:24 AM Andreas Müller

ref #6362 remove some further NVN occurrences

2d370ced 01/30/2017 12:24 AM Andreas Müller

ref #6366 move cultivar attributes and functions to TaxonNameBase

da39aca0 01/30/2017 12:24 AM Andreas Müller

ref #6365 merge static methods from BotanicaName to TaxonNameBase

0d8c0513 01/30/2017 12:24 AM Andreas Müller

ref #6365 ref #6360 ref #6364 replace taxon name factory methods

5b88f807 01/30/2017 12:24 AM Andreas Müller

ref #6360 replace NonViralName factory methods

3d58795e 01/26/2017 04:59 PM Andreas Müller

ref #6369 adapt existing occurrences of interface to removed generics

951f636d 01/26/2017 04:00 PM Andreas Müller

ref #6362 removed some NonViralName occurrences (make it compiling again)

a4c9dfc9 01/26/2017 04:00 PM Andreas Müller

ref #6362 removed some NonViralName occurrences (non-compiling as changing in model are still missing)

6a12debb 01/20/2017 05:06 PM Andreas Müller

fix #2501 remove redundant SDD import class

69222e4e 01/20/2017 05:04 PM Andreas Müller

minor

0d3ee32e 01/10/2017 11:10 AM Andreas Müller

cleanup

e15d2c8e 12/20/2016 02:29 PM Andreas Kohlbecker

ref #6190 removing svn property place holder in first line of code - java files

68a19847 12/20/2016 01:16 PM Katja Luther

minot

7cbe2b56 12/20/2016 01:02 PM Katja Luther

missing changes for repair methods and cdmPreferences in editor

d45008d0 12/20/2016 11:49 AM Andreas Kohlbecker

ref #6190 removing svn property place holder in first line of code

62d8efcf 12/13/2016 11:48 AM Katja Luther

extend biocase import

df89b529 12/13/2016 11:46 AM Katja Luther

extend excel import for tropicos

3977b110 12/12/2016 02:27 PM Katja Luther

fix #6274: add an update for childrenCount cache if count of children not the same as the cache

6a3f4c50 12/08/2016 11:34 AM Katja Luther

ref #4766: prepair the sortindex updater for calling via IOService

e6d7607d 12/01/2016 03:42 PM Andreas Müller

add getIdentifierType to IO Transformers

ea2e509b 11/18/2016 10:22 PM Andreas Müller

Cleanup

f8dab136 11/18/2016 10:22 PM Andreas Müller

ref #3934 update Salvador import for facts

3d037d99 11/18/2016 04:40 PM Andreas Müller

Latest BM import updates for Salvador

eaf29c2e 11/15/2016 08:43 AM Andreas Müller

cleanup

f3fc1024 11/10/2016 01:09 PM Andreas Müller

Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop

Conflicts:
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/TaxonInteraction.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/test/function/TestModelUpdate.java

e25fecb9 11/10/2016 12:48 PM Andreas Müller

cleanup

a6f3a18c 11/08/2016 02:21 PM Andreas Müller

Clean up deprecated methods in name service

a663859a 11/08/2016 09:48 AM Katja Luther

minor

57089e91 11/07/2016 09:42 AM Katja Luther

minor

ce790c77 11/07/2016 09:33 AM Katja Luther

ref #6166: import siblings if an specimen and smaller changes in ABCD
import

cea52158 11/06/2016 01:00 PM Patrick Plitzner

ref #5449 Imporvements for CSV export

  • Fix initialization problems
  • Correctly match taxon name to chosen classification
  • allow export for single leaf node
4b6abd7e 11/04/2016 02:08 PM Andreas Müller

Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop

Conflicts:
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/ITaxonNodeService.java

5aa29971 10/28/2016 10:34 AM Katja Luther

abcd import: association type living culture is a parent child relation

98053545 10/14/2016 04:13 PM Andreas Müller

ref #3925 Move excluded and unplaced to TaxonNode

c0248cde 10/13/2016 01:14 PM Andreas Müller

ref #3658 remove nomenclaturalCode from all datasource related classes

  • and rename NomenclaturalCodeAwareDataSource
fbeefcaf 10/13/2016 09:58 AM Andreas Müller

ref #5974 Replace synonymRelationshipType by SynonymType and replace some other occurrences of synonym relationship

f476ff86 10/12/2016 09:00 PM Andreas Müller

ref #5974 Remove synonym relationship first compiling implementation in cdmlib

a14ebae1 10/07/2016 11:17 AM Andreas Müller

remove ImportReport in model branch

4881f5e5 10/07/2016 10:53 AM Andreas Müller

ref #5499 add some markerType methods

51cfe899 10/07/2016 10:53 AM Katja Luther

add missing changes

4b37153c 10/07/2016 10:53 AM Katja Luther

minor

91e5776b 10/07/2016 10:52 AM Katja Luther

specimen import/search changes

83220271 10/07/2016 10:23 AM Andreas Kohlbecker

Revert "fix #6037 per batch transction commit implemented for excel imports"

This reverts commit 53067226137bd8528e6bc26f21edbf98aebe26a9.

e5605065 10/07/2016 10:23 AM Andreas Müller

ref #6089 Remove all calls and methods for taxonomicChildrenCount and taxonomicParentCache

77c1c705 10/07/2016 10:23 AM Patrick Plitzner

Remove duplicate method

f380413e 10/07/2016 10:23 AM Katja Luther

minor

e1c69e2f 10/07/2016 10:23 AM Katja Luther

minor

3d36bbcd 10/07/2016 10:23 AM Katja Luther

smaller changes for importing nom. reference in normal explicit excel import

f44fb5c3 10/07/2016 10:22 AM Katja Luther

normal explicit excel import: add reference to name import

6d3f64b8 10/07/2016 10:22 AM Katja Luther

minor changes in excel import

47da1bc9 10/07/2016 10:22 AM Katja Luther

extend excel import to cover simple tropicos data

075bc33f 10/07/2016 10:22 AM Patrick Plitzner

Fix merge problems

d81a4119 10/07/2016 10:22 AM Patrick Plitzner

fix #6001 Clean up multiple sourceNotLinked() methods

80d86f0e 10/07/2016 10:22 AM Katja Luther

smaller changes

d3c53a58 10/07/2016 10:22 AM Katja Luther

specimen import changes

7f3f7703 10/07/2016 10:22 AM Patrick Plitzner

Import specimen scans with StillImage type

e5413aa3 10/07/2016 10:22 AM Patrick Plitzner

Remove unneccesary casts

65053ce9 10/07/2016 10:22 AM Andreas Kohlbecker

fix #6037 per batch transction commit implemented for excel imports

e561a9d4 10/07/2016 10:22 AM Andreas Müller

#6000 Use new CASUAL Method instead of derpeacted INTRODUCED_ADVENTITIOUS

eafa3175 10/07/2016 10:22 AM Andreas Müller

#6000 Unify some PresenceAbsenceTerms (merge naturalized, rename adventitious -> casual, etc)

67cecfbb 10/07/2016 10:22 AM Patrick Plitzner

Improve import report

15b4b2c0 10/07/2016 10:22 AM Patrick Plitzner

#5251 Fix Incorrect taxon source attachments

adfafad3 10/07/2016 10:22 AM Patrick Plitzner

Improved import report

b5a13d3d 10/06/2016 05:02 PM Katja Luther

set the tests to ignore until the dna import is fixed again

29ee6f42 10/06/2016 05:02 PM Katja Luther

fix merge problems

40ad1567 10/06/2016 05:02 PM Katja Luther

fix merge problems

51fdd82a 10/06/2016 05:02 PM Katja Luther

fix merge problem

2bcd23da 10/06/2016 05:02 PM Patrick Plitzner

Improve ABCD import report

702e2f6e 10/06/2016 05:01 PM Katja Luther

Revert "getUuidAndTitleCache of classificationservice does not need the excluded taxa"

This reverts commit 1b553592f0055e0fec1ab3878236fa0ecad1bd17.

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