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cdmlib / cdmlib-io / src / main / java / eu / etaxonomy / cdm / io / specimen / abcd206 @ 44e7c392

# Date Author Comment
44e7c392 09/14/2017 08:45 PM Katja Luther

fix abcd import for associated units

05f33e9b 09/12/2017 09:14 AM Katja Luther

ABCD import:set fieldUnit in derivedUnitFace after creation to avoid new creation of fieldUnit

29024880 08/05/2017 01:39 AM Andreas Müller

cleanup

89102b8a 07/01/2017 11:09 PM Andreas Müller

cleanup and adapt export hierarchie (add destination generics)

631f622d 06/19/2017 03:24 PM Katja Luther

smaller changes in specimen import

6b381b7d 06/05/2017 11:01 AM Andreas Müller

ref #6368 remove some further occurrences of ITaxonNameBase

5de5776a 05/12/2017 01:32 PM Katja Luther

revert the last change in AbcdImport

651101eb 05/12/2017 12:34 PM Andreas Müller

cleanup

d9fdd3d9 05/12/2017 11:35 AM Katja Luther

reload default classification after commit

41d0e850 05/11/2017 03:50 PM Katja Luther

fix ABCD206XMLFieldGetter

a0d85e3f 05/11/2017 02:37 PM Katja Luther

adapt Abcd206Import for gbol

8409d645 04/21/2017 03:10 PM Katja Luther

fix siblings import and source reference import

6b80fbf3 04/13/2017 01:41 PM Katja Luther

some code cleaning and improvement of siblings search

947a405e 04/12/2017 03:21 PM Katja Luther

minor

200bc6fb 04/12/2017 03:12 PM Katja Luther

ref #6166: parsing of siblings and search for siblings in different accessPoints

d33c0bce 04/06/2017 10:52 AM Katja Luther

adapt ABCD and GBIF imports to requirements of algae specimen and obeservation imports

0befeb80 03/24/2017 08:27 PM unknown

Cleanup

ad4315e4 03/24/2017 06:17 PM unknown

cleanup

41356809 02/15/2017 09:55 AM Andreas Kohlbecker

ref #6419 renaming ICdmApplicationDefaultConfiguration to ICdmRepository

7cdc874a 02/06/2017 10:09 AM Katja Luther

changes in specimen import

5adaf480 02/03/2017 10:52 AM Patrick Plitzner

fix #6408 Fix potential NPE in AbcdParseUtility

d45008d0 12/20/2016 11:49 AM Andreas Kohlbecker

ref #6190 removing svn property place holder in first line of code

62d8efcf 12/13/2016 11:48 AM Katja Luther

extend biocase import

f3fc1024 11/10/2016 01:09 PM Andreas Müller

Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop

Conflicts:
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/TaxonInteraction.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/test/function/TestModelUpdate.java

57089e91 11/07/2016 09:42 AM Katja Luther

minor

ce790c77 11/07/2016 09:33 AM Katja Luther

ref #6166: import siblings if an specimen and smaller changes in ABCD
import

4b6abd7e 11/04/2016 02:08 PM Andreas Müller

Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop

Conflicts:
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/ITaxonNodeService.java

5aa29971 10/28/2016 10:34 AM Katja Luther

abcd import: association type living culture is a parent child relation

a14ebae1 10/07/2016 11:17 AM Andreas Müller

remove ImportReport in model branch

4b37153c 10/07/2016 10:53 AM Katja Luther

minor

91e5776b 10/07/2016 10:52 AM Katja Luther

specimen import/search changes

77c1c705 10/07/2016 10:23 AM Patrick Plitzner

Remove duplicate method

075bc33f 10/07/2016 10:22 AM Patrick Plitzner

Fix merge problems

d81a4119 10/07/2016 10:22 AM Patrick Plitzner

fix #6001 Clean up multiple sourceNotLinked() methods

d3c53a58 10/07/2016 10:22 AM Katja Luther

specimen import changes

7f3f7703 10/07/2016 10:22 AM Patrick Plitzner

Import specimen scans with StillImage type

e5413aa3 10/07/2016 10:22 AM Patrick Plitzner

Remove unneccesary casts

67cecfbb 10/07/2016 10:22 AM Patrick Plitzner

Improve import report

15b4b2c0 10/07/2016 10:22 AM Patrick Plitzner

#5251 Fix Incorrect taxon source attachments

adfafad3 10/07/2016 10:22 AM Patrick Plitzner

Improved import report

29ee6f42 10/06/2016 05:02 PM Katja Luther

fix merge problems

40ad1567 10/06/2016 05:02 PM Katja Luther

fix merge problems

51fdd82a 10/06/2016 05:02 PM Katja Luther

fix merge problem

2bcd23da 10/06/2016 05:02 PM Patrick Plitzner

Improve ABCD import report

702e2f6e 10/06/2016 05:01 PM Katja Luther

Revert "getUuidAndTitleCache of classificationservice does not need the excluded taxa"

This reverts commit 1b553592f0055e0fec1ab3878236fa0ecad1bd17.

4d622b5d 10/06/2016 05:01 PM Katja Luther

getUuidAndTitleCache of classificationservice does not need the excluded taxa

1600af50 09/30/2016 04:34 PM Katja Luther

minor

090cb34e 09/30/2016 04:09 PM Katja Luther

specimen import/search changes

4ee2ca3b 09/13/2016 11:28 AM Patrick Plitzner

Remove duplicate method

777a1b03 08/15/2016 03:51 PM Patrick Plitzner

Fix merge problems

1bf155ea 08/15/2016 03:05 PM Patrick Plitzner

fix #6001 Clean up multiple sourceNotLinked() methods

253ccd8a 08/12/2016 09:49 AM Katja Luther

specimen import changes

85396070 08/11/2016 03:20 PM Patrick Plitzner

Import specimen scans with StillImage type

c7699d82 08/11/2016 03:19 PM Patrick Plitzner

Remove unneccesary casts

2f9b50b4 07/25/2016 10:05 AM Patrick Plitzner

Improve import report

3fac85e9 07/21/2016 09:14 PM Patrick Plitzner

#5251 Fix Incorrect taxon source attachments

cef0a41d 07/19/2016 05:16 PM Patrick Plitzner

Improved import report

c7415eab 07/19/2016 03:54 PM Patrick Plitzner

Saving files before refreshing line endings

2c774ade 07/19/2016 03:46 PM Katja Luther

fix merge problems

2c12c2ca 07/19/2016 03:26 PM Katja Luther

fix merge problems

6a9f4423 07/19/2016 03:24 PM Katja Luther

fix merge problem

2ab5e217 07/19/2016 02:53 PM Patrick Plitzner

Improve ABCD import report

9eb8d3fa 07/19/2016 02:16 PM Katja Luther

Revert "getUuidAndTitleCache of classificationservice does not need the excluded taxa"

This reverts commit 1b553592f0055e0fec1ab3878236fa0ecad1bd17.

5c01c676 07/19/2016 02:15 PM Katja Luther

getUuidAndTitleCache of classificationservice does not need the excluded taxa

531fc7bc 05/25/2016 12:11 PM Andreas Müller

Remove generics from Reference in cdmlib (except for cdmlib-model) #5830

0ecfd682 04/28/2016 03:47 PM Andreas Müller

Remove bidirectionality for supplemental data #5743

0db79acb 03/30/2016 11:17 AM Katja Luther

add query to ABCDImportConfigurator

81e42009 02/22/2016 01:58 PM Patrick Plitzner

Fix potential NPE

3e01d1be 11/30/2015 02:48 PM Patrick Plitzner

Show complete stacktrace in import report

b00a67e8 11/30/2015 02:25 PM Patrick Plitzner

Fix counting of specimens created in ABCD import report

44ffca34 11/30/2015 10:23 AM Patrick Plitzner

Parse spatial data for gathering event in ABCD import #5169

bd70ceb2 11/25/2015 11:18 AM Patrick Plitzner

Set Unit/Notes and Gathering/Notes in ABCD import #5168

f16eafb5 11/25/2015 07:44 AM Patrick Plitzner

Import missing parameters for ggbn ABCD import
- some refactoring

eee9b39a 11/16/2015 03:05 PM Patrick Plitzner

Refactored import return type from boolean to ImportResult

1ae59e40 11/16/2015 03:05 PM Patrick Plitzner

Move import report to import state super class

1c7b9181 10/28/2015 03:21 PM Cherian Mathew

#5297 Add cancel and waitForFeedback functionality

Correct work units

3087df1b 10/27/2015 04:24 PM Cherian Mathew

#5297 Refactor ProgressMonitorController, Add Remoting Progress monitor

#5297 Add progress monitor service, Add test services

#5297 Add monit import method

#5297 Update no. of work units

#5297 Add new thread class for remoting monitors

#5297 Add owner field to monitor thread and user checks in service...

eb142a9d 10/26/2015 02:24 PM Patrick Plitzner

Fix NPE in ABCD import collection matching

  • also added for-loop break
216aa231 10/26/2015 02:24 PM Patrick Plitzner

Add stack trace to import report

73bc3754 09/02/2015 11:08 AM Patrick Plitzner

Enhance ABCD import report

94fe584f 09/01/2015 08:24 AM Patrick Plitzner

Refine rank parsing

  • if rank cannot be parsed the taxon will be created as is with a single taxon node without any parent taxon node but the classification itself
  • some code refactoring
  • avoid NPEs
93276717 08/19/2015 08:44 AM Patrick Plitzner

Enhance ignored import due to already existing specimens

8f443c62 08/06/2015 03:57 PM Cherian Mathew

#5130 Extend cdmlib import architecture to allow for remoting and Add import methods to IOService

5aba9cda 07/21/2015 11:26 AM Patrick Plitzner

Add support for ABCD 2.0.6 in UnitAssociationParser

822ae6e6 07/20/2015 05:14 PM Patrick Plitzner

WARNING: head commit changed in the meantime

Log ignored specimens in import report

cc83c990 07/15/2015 09:06 AM Patrick Plitzner

Add two new test files

02668d2d 07/15/2015 09:02 AM Patrick Plitzner

Enhance name parsing
- more logging
- fixed rank assignment

7352c7ff 07/15/2015 07:52 AM Patrick Plitzner

Error logging for name parsing

  • advanced readability
92fac617 07/15/2015 07:49 AM Patrick Plitzner

Enhance name parsing

  • added more error logging
  • avoid creating duplicate taxon names due to parsing problems
ffed529c 07/15/2015 07:48 AM Patrick Plitzner

Remove parseNameAutomatically flag

64b06209 07/14/2015 01:03 PM Patrick Plitzner

Refactor ABCD import

  • use association wrapper to store prefix
  • correctly push and pop import state
  • only delete field unit if it has no other links to objects
3e62e4f0 07/14/2015 09:28 AM Patrick Plitzner

Refactor ABCD import

  • removed "determination on field unit level" flag
  • parse unit associations recursively
  • removed field unit from import state
  • enhanced unit association handling concerning field units and ereivation events
e128b27b 07/13/2015 02:46 PM Patrick Plitzner

Fix taxon existance check

ab3b8d60 07/13/2015 07:03 AM Patrick Plitzner

Add import report logging to utility methods

9f054d7a 07/08/2015 02:44 PM Patrick Plitzner

Catch exception instead of throwing them

Lets the methods return

a74084cb 07/08/2015 02:24 PM Patrick Plitzner

Error loggind during import

19b24dc9 07/08/2015 09:40 AM Patrick Plitzner

Add exception during import to report

33262f8c 07/08/2015 07:34 AM Patrick Plitzner

Fix classification handling for new and exisiting taxa

50103603 07/07/2015 05:19 PM Patrick Plitzner

Exception handling

  • moved report printing to finally clause to always have a report.
  • fixed possible NPE
1d413cc8 07/07/2015 03:37 PM Patrick Plitzner

Handle default classification in state object

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