Revision f7e576ba
Added by Andreas Müller over 2 years ago
| cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/name/TaxonNameDefaultCacheStrategy.java | ||
|---|---|---|
| 11 | 11 |
import java.util.ArrayList; |
| 12 | 12 |
import java.util.List; |
| 13 | 13 |
import java.util.UUID; |
| 14 |
import java.util.regex.Matcher; |
|
| 15 |
import java.util.regex.Pattern; |
|
| 14 | 16 |
|
| 15 | 17 |
import org.apache.log4j.Logger; |
| 16 | 18 |
|
| ... | ... | |
| 377 | 379 |
} else /*if (isNotBlank(taxonName.getGenusOrUninomial())) */{
|
| 378 | 380 |
scientificNameTags = getGenusOrUninomialTaggedNameCache(taxonName); |
| 379 | 381 |
} |
| 380 |
String cultivarStr; |
|
| 381 |
if (taxonName.getRank().getUuid().equals(Rank.uuidCultivar)){
|
|
| 382 |
|
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| 383 |
UUID rankUuid = taxonName.getRank().getUuid(); |
|
| 384 |
boolean rankIsHandled = true; |
|
| 385 |
String cultivarStr = null; |
|
| 386 |
String groupStr = taxonName.getCultivarGroup(); |
|
| 387 |
if (rankUuid.equals(Rank.uuidCultivar)){
|
|
| 382 | 388 |
cultivarStr = surroundedCultivarEpithet(taxonName); |
| 389 |
if (isNotBlank(cultivarStr) && isNotBlank(groupStr)){
|
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| 390 |
groupStr = surroundGroupWithBracket(groupStr); |
|
| 391 |
} |
|
| 392 |
cultivarStr = CdmUtils.concat(" ", groupStr, cultivarStr);
|
|
| 393 |
}else if (rankUuid.equals(Rank.uuidCultivarGroup)){
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| 394 |
cultivarStr = CdmUtils.concat(" ", groupStr, checkHasGroupEpithet(groupStr)? null: "Group");
|
|
| 395 |
}else if (rankUuid.equals(Rank.uuidGrex)){
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cultivarStr = CdmUtils.concat(" ", groupStr, checkHasGrexEpithet(groupStr)? null: "grex");
|
|
| 397 |
}else{
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| 398 |
rankIsHandled = false; |
|
| 399 |
} |
|
| 400 |
if (isNotBlank(cultivarStr)){
|
|
| 383 | 401 |
builder.addAll(scientificNameTags); |
| 384 | 402 |
builder.add(TagEnum.cultivar, cultivarStr); |
| 385 |
}else if (taxonName.getRank().getUuid().equals(Rank.uuidCultivarGroup)){
|
|
| 386 |
//TODO check if Group exists in Name already |
|
| 387 |
cultivarStr = taxonName.getCultivarName() + (checkHasGroupEpithet(taxonName.getCultivarName())? "": " Group"); |
|
| 388 |
builder.addAll(scientificNameTags); |
|
| 389 |
builder.add(TagEnum.cultivar, cultivarStr); |
|
| 390 |
}else if (taxonName.getRank().getUuid().equals(Rank.uuidGrex)){
|
|
| 391 |
cultivarStr = taxonName.getCultivarName() + (checkHasGrexEpithet(taxonName.getCultivarName())? "": " grex"); |
|
| 392 |
builder.addAll(scientificNameTags); |
|
| 393 |
builder.add(TagEnum.cultivar, cultivarStr); |
|
| 394 |
}else if (taxonName.getRank().getUuid().equals(Rank.uuidGraftChimaera)){
|
|
| 403 |
} |
|
| 404 |
|
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| 405 |
if (rankUuid.equals(Rank.uuidGraftChimaera)){
|
|
| 395 | 406 |
//TODO not yet fully implemented |
| 396 | 407 |
cultivarStr = "+ " + taxonName.getGenusOrUninomial() + " " + surroundedCultivarEpithet(taxonName); |
| 397 | 408 |
builder.add(TagEnum.cultivar, cultivarStr); |
| 398 |
}else{
|
|
| 409 |
} else if (!rankIsHandled){
|
|
| 399 | 410 |
throw new IllegalStateException("Unsupported rank " + taxonName.getRank().getTitleCache() + " for cultivar.");
|
| 400 | 411 |
} |
| 401 | 412 |
|
| 402 | 413 |
return builder.getTaggedText(); |
| 403 | 414 |
} |
| 404 | 415 |
|
| 405 |
private boolean checkHasGroupEpithet(String cultivarName) {
|
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| 406 |
String[] splits = cultivarName.split("\\s+");
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| 416 |
private String surroundGroupWithBracket(String groupStr) {
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if (groupStr.matches(NonViralNameParserImplRegExBase.grex + "$")){
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return groupStr; |
|
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}else if (groupStr.matches(".*" + NonViralNameParserImplRegExBase.grex + ".+")){
|
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| 420 |
Matcher matcher = Pattern.compile(NonViralNameParserImplRegExBase.grex + "\\s*" ).matcher(groupStr); |
|
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matcher.find(); |
|
| 422 |
return groupStr.substring(0, matcher.end()) + "("+ groupStr.substring(matcher.end())+ ")";
|
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| 423 |
}else{
|
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| 424 |
return "("+ groupStr + ")";
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| 425 |
} |
|
| 426 |
} |
|
| 427 |
|
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| 428 |
private boolean checkHasGroupEpithet(String group) {
|
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| 429 |
|
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| 430 |
String[] splits = group == null? new String[0]: group.split("\\s+");
|
|
| 407 | 431 |
if (splits.length <= 1){
|
| 408 | 432 |
return false; |
| 409 | 433 |
}else if (splits[0].matches(NonViralNameParserImplRegExBase.group) |
| ... | ... | |
| 414 | 438 |
} |
| 415 | 439 |
} |
| 416 | 440 |
|
| 417 |
private boolean checkHasGrexEpithet(String cultivarName) {
|
|
| 418 |
String[] splits = cultivarName.split("\\s+");
|
|
| 441 |
private boolean checkHasGrexEpithet(String grex) {
|
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| 442 |
String[] splits = grex == null? new String[0]: grex.split("\\s+");
|
|
| 419 | 443 |
if (splits.length <= 1){
|
| 420 | 444 |
return false; |
| 421 | 445 |
}else if (splits[splits.length-1].matches(NonViralNameParserImplRegExBase.grex)){
|
Also available in: Unified diff
ref #9761 add cultivarGroup column