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/**
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* Copyright (C) 2007 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.cdm.model.description;
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import java.util.HashMap;
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import java.util.Map;
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import javax.persistence.Entity;
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import javax.persistence.FetchType;
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import javax.persistence.JoinTable;
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import javax.persistence.ManyToOne;
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import javax.persistence.MapKeyJoinColumn;
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import javax.persistence.OneToMany;
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import javax.xml.bind.annotation.XmlAccessType;
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import javax.xml.bind.annotation.XmlAccessorType;
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import javax.xml.bind.annotation.XmlElement;
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import javax.xml.bind.annotation.XmlIDREF;
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import javax.xml.bind.annotation.XmlRootElement;
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import javax.xml.bind.annotation.XmlSchemaType;
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import javax.xml.bind.annotation.XmlType;
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import javax.xml.bind.annotation.adapters.XmlJavaTypeAdapter;
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import org.apache.log4j.Logger;
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import org.hibernate.annotations.Cascade;
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import org.hibernate.annotations.CascadeType;
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import org.hibernate.envers.Audited;
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import org.hibernate.search.annotations.Indexed;
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import eu.etaxonomy.cdm.jaxb.MultilanguageTextAdapter;
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import eu.etaxonomy.cdm.model.common.IMultiLanguageTextHolder;
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import eu.etaxonomy.cdm.model.common.Language;
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import eu.etaxonomy.cdm.model.common.LanguageString;
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import eu.etaxonomy.cdm.model.common.MultilanguageText;
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import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
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/**
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* This class represents associations between the described
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* {@link SpecimenOrObservationBase specimen or observation}
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* and a second one (for instance a host).
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* Only {@link SpecimenDescription specimen descriptions} may contain individuals association.
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* The association itself is described by a {@link MultilanguageText multilanguage text}.
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* <P>
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* This class corresponds (partially) to NaturalLanguageDescriptionType
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* according to the SDD schema.
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*
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* @author m.doering
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* @version 1.0
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* @created 08-Nov-2007 13:06:28
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*/
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@XmlAccessorType(XmlAccessType.FIELD)
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@XmlType(name = "IndividualsAssociation", propOrder = {
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"description",
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"associatedSpecimenOrObservation"
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})
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@XmlRootElement(name = "IndividualsAssociation")
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@Entity
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@Audited
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@Indexed(index = "eu.etaxonomy.cdm.model.description.DescriptionElementBase")
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public class IndividualsAssociation extends DescriptionElementBase implements IMultiLanguageTextHolder, Cloneable{
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private static final long serialVersionUID = -4117554860254531809L;
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private static final Logger logger = Logger.getLogger(IndividualsAssociation.class);
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@XmlElement(name = "Description")
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@XmlJavaTypeAdapter(MultilanguageTextAdapter.class)
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@OneToMany(fetch = FetchType.LAZY, orphanRemoval=true)
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@MapKeyJoinColumn(name="description_mapkey_id")
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@Cascade({CascadeType.SAVE_UPDATE,CascadeType.MERGE, CascadeType.DELETE })
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@JoinTable(name = "IndividualsAssociation_LanguageString") //to distinguish from other DescriptionElementBase_LanguageString cases
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private Map<Language,LanguageString> description = new HashMap<Language,LanguageString>();
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@XmlElement(name = "AssociatedSpecimenOrObservation")
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@XmlIDREF
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@XmlSchemaType(name = "IDREF")
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@ManyToOne(fetch = FetchType.LAZY)
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@Cascade({CascadeType.SAVE_UPDATE,CascadeType.MERGE})
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private SpecimenOrObservationBase associatedSpecimenOrObservation;
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/**
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* Class constructor: creates a new empty individuals association instance.
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*/
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protected IndividualsAssociation(){
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super(null);
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}
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/**
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* Creates a new empty individuals association instance.
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*/
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public static IndividualsAssociation NewInstance(){
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return NewInstance(null);
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}
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/**
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* Creates a new empty individuals association instance.
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*/
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public static IndividualsAssociation NewInstance(SpecimenOrObservationBase specimen){
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IndividualsAssociation result = new IndividualsAssociation();
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result.setFeature(Feature.INDIVIDUALS_ASSOCIATION());
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result.setAssociatedSpecimenOrObservation(specimen);
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return result;
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}
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/**
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* Returns the second {@link SpecimenOrObservationBase specimen or observation}
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* involved in <i>this</i> individuals association.
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* The first specimen or observation is the specimen or observation
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* described in the corresponding {@link SpecimenDescription specimen description}.
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*/
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public SpecimenOrObservationBase getAssociatedSpecimenOrObservation() {
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return associatedSpecimenOrObservation;
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}
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/**
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* @see #getAssociatedSpecimenOrObservation()
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*/
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public void setAssociatedSpecimenOrObservation(
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SpecimenOrObservationBase associatedSpecimenOrObservation) {
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this.associatedSpecimenOrObservation = associatedSpecimenOrObservation;
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}
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/**
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* Returns the {@link MultilanguageText multilanguage text} used to describe
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* <i>this</i> individuals association. The different {@link LanguageString language strings}
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* contained in the multilanguage text should all have the same meaning.
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*/
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public Map<Language,LanguageString> getDescription(){
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return this.description;
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}
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/**
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* Adds a translated {@link LanguageString text in a particular language}
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* to the {@link MultilanguageText multilanguage text} used to describe
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* <i>this</i> individuals association.
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*
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* @param description the language string describing the individuals association
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* in a particular language
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* @see #getDescription()
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* @see #putDescription(Language, String)
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* @deprecated should follow the put semantic of maps, this method will be removed in v4.0
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* Use the {@link #putDescription(LanguageString) putDescription} method instead
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*/
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@Deprecated
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public void addDescription(LanguageString description){
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this.putDescription(description);
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}
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/**
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* Adds a translated {@link LanguageString text in a particular language}
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* to the {@link MultilanguageText multilanguage text} used to describe
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* <i>this</i> individuals association.
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*
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* @param description the language string describing the individuals association
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* in a particular language
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* @see #getDescription()
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* @see #putDescription(Language, String)
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*
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*/
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public void putDescription(LanguageString description){
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this.description.put(description.getLanguage(),description);
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}
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/**
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* Creates a {@link LanguageString language string} based on the given text string
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* and the given {@link Language language} and adds it to the {@link MultilanguageText multilanguage text}
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* used to describe <i>this</i> individuals association.
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*
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* @param text the string describing the individuals association
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* in a particular language
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* @param language the language in which the text string is formulated
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* @see #getDescription()
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* @see #putDescription(LanguageString)
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*/
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public void putDescription(Language language, String text){
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this.description.put(language, LanguageString.NewInstance(text, language));
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}
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/**
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* Creates a {@link LanguageString language string} based on the given text string
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* and the given {@link Language language} and adds it to the {@link MultilanguageText multilanguage text}
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* used to describe <i>this</i> individuals association.
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*
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* @param text the string describing the individuals association
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* in a particular language
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* @param language the language in which the text string is formulated
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* @see #getDescription()
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* @see #putDescription(LanguageString)
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* @deprecated should follow the put semantic of maps, this method will be removed in v4.0
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* Use the {@link #putDescription(Language, String) putDescription} method instead
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*/
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@Deprecated
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public void addDescription(String text, Language language){
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this.putDescription(language, text);
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}
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/**
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* Removes from the {@link MultilanguageText multilanguage text} used to describe
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* <i>this</i> individuals association the one {@link LanguageString language string}
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* with the given {@link Language language}.
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*
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* @param language the language in which the language string to be removed
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* has been formulated
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* @see #getDescription()
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*/
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public void removeDescription(Language language){
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this.description.remove(language);
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}
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//*********************************** CLONE *****************************************/
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/**
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* Clones <i>this</i> individuals association. This is a shortcut that enables to create
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* a new instance that differs only slightly from <i>this</i> individuals association by
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* modifying only some of the attributes.
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*
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* @see eu.etaxonomy.cdm.model.description.DescriptionElementBase#clone()
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* @see java.lang.Object#clone()
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*/
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@Override
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public Object clone() {
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try {
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IndividualsAssociation result = (IndividualsAssociation)super.clone();
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//description
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result.description = new HashMap<Language, LanguageString>();
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for (Language language : getDescription().keySet()){
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//TODO clone needed?
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LanguageString newLanguageString = (LanguageString)getDescription().get(language).clone();
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result.description.put(language, newLanguageString);
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}
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return result;
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//no changes to: associatedSpecimenOrObservation
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} catch (CloneNotSupportedException e) {
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logger.warn("Object does not implement cloneable");
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e.printStackTrace();
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return null;
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}
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}
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}
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