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/**
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* Copyright (C) 2007 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.cdm.io.specimen.abcd206.in;
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import java.io.ByteArrayOutputStream;
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import java.io.PrintStream;
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import java.net.URI;
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import java.util.ArrayList;
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import java.util.HashSet;
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import java.util.List;
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import java.util.Set;
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import org.apache.log4j.Logger;
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import eu.etaxonomy.cdm.io.specimen.SpecimenImportStateBase;
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/**
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* @author a.mueller
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* @since 11.05.2009
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*/
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public class Abcd206ImportState
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extends SpecimenImportStateBase<Abcd206ImportConfigurator, Abcd206ImportState>{
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@SuppressWarnings("unused")
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private static final Logger logger = Logger.getLogger(Abcd206ImportState.class);
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private String prefix;
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private List<String[]> associatedUnitIds = new ArrayList<String[]>();
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private Set<URI> allAccesPoints = new HashSet<>();
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private URI actualAccessPoint;
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private Set<URI> sequenceDataStableIdentifier = new HashSet<>();
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//****************** CONSTRUCTOR ***************************************************/
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public Abcd206ImportState(Abcd206ImportConfigurator config) {
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super(config);
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setReport(new SpecimenImportReport());
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setTransformer(new AbcdTransformer());
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}
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//************************ GETTER / SETTER *****************************************/
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@Override
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public Abcd206DataHolder getDataHolder() {
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return (Abcd206DataHolder)dataHolder;
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}
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public void setDataHolder(Abcd206DataHolder dataHolder) {
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this.dataHolder = dataHolder;
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}
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public void setPrefix(String prefix) {
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this.prefix = prefix;
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}
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public String getPrefix() {
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return prefix;
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}
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@Override
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public byte[] getReportAsByteArray() {
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ByteArrayOutputStream importStream = new ByteArrayOutputStream();
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getReport().printReport(new PrintStream(importStream));
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return importStream.toByteArray();
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}
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public void setAssociatedUnitIds(List<String[]> associatedUnitIds){
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this.associatedUnitIds = associatedUnitIds;
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}
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public List<String[]> getAssociatedUnitIds(){
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return this.associatedUnitIds;
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}
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/**
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* @return the actualAccesPoint
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*/
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public Set<URI> getActualAccesPoint() {
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return allAccesPoints;
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}
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/**
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* @param actualAccesPoint the actualAccesPoint to set
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*/
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public void addActualAccesPoint(URI actualAccesPoint) {
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this.allAccesPoints.add(actualAccesPoint);
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}
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/**
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* @return the actualAccessPoint
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*/
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public URI getActualAccessPoint() {
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return actualAccessPoint;
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}
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/**
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* @param actualAccessPoint the actualAccessPoint to set
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*/
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public void setActualAccessPoint(URI actualAccessPoint) {
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this.addActualAccesPoint(actualAccessPoint);
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this.actualAccessPoint = actualAccessPoint;
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}
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public Set<URI> getSequenceDataStableIdentifier() {
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return sequenceDataStableIdentifier;
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}
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public void putSequenceDataStableIdentifier(URI sequenceDataStableIdentifier) {
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this.sequenceDataStableIdentifier.add(sequenceDataStableIdentifier);
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}
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//
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// public void reset() {
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// getDataHolder().reset();
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// setDerivedUnitBase(null);
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// }
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}
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