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/**
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* Copyright (C) 2007 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.cdm.strategy.cache.name;
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import static org.junit.Assert.assertEquals;
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import static org.junit.Assert.assertNotNull;
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import static org.junit.Assert.assertNull;
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import java.lang.reflect.Method;
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import java.util.GregorianCalendar;
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import org.apache.log4j.Logger;
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import org.junit.Before;
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import org.junit.BeforeClass;
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import org.junit.Test;
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import eu.etaxonomy.cdm.model.agent.Person;
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import eu.etaxonomy.cdm.model.agent.TeamOrPersonBase;
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import eu.etaxonomy.cdm.model.common.DefaultTermInitializer;
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import eu.etaxonomy.cdm.model.common.VerbatimTimePeriod;
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import eu.etaxonomy.cdm.model.name.INonViralName;
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import eu.etaxonomy.cdm.model.name.NomenclaturalStatus;
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import eu.etaxonomy.cdm.model.name.NomenclaturalStatusType;
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import eu.etaxonomy.cdm.model.name.Rank;
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import eu.etaxonomy.cdm.model.name.TaxonName;
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import eu.etaxonomy.cdm.model.name.TaxonNameFactory;
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import eu.etaxonomy.cdm.model.reference.Reference;
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import eu.etaxonomy.cdm.model.reference.ReferenceFactory;
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/**
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* @author a.mueller
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*
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*/
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public class BotanicNameCacheStrategyTest extends NameCacheStrategyTestBase{
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private static final Logger logger = Logger.getLogger(BotanicNameCacheStrategyTest.class);
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private static final String familyNameString = "Familia";
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private static final String genusNameString = "Genus";
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private static final String speciesNameString = "Abies alba";
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private static final String subSpeciesNameString = "Abies alba subsp. beta";
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private static final String appendedPhraseString = "app phrase";
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private static final String authorString = "L.";
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private static final String exAuthorString = "Exaut.";
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private static final String basAuthorString = "Basio, A.";
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private static final String exBasAuthorString = "ExBas. N.";
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private TaxonNameDefaultCacheStrategy strategy;
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private TaxonName familyName;
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private TaxonName genusName;
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private TaxonName subGenusName;
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private TaxonName speciesName;
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private TaxonName subSpeciesName;
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private TeamOrPersonBase<?> author;
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private TeamOrPersonBase<?> exAuthor;
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private TeamOrPersonBase<?> basAuthor;
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private TeamOrPersonBase<?> exBasAuthor;
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private Reference citationRef;
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ReferenceFactory refFactory;
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/**
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* @throws java.lang.Exception
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*/
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@BeforeClass
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public static void setUpBeforeClass() {
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DefaultTermInitializer vocabularyStore = new DefaultTermInitializer();
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vocabularyStore.initialize();
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}
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/**
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* @throws java.lang.Exception
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*/
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@Before
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public void setUp() throws Exception {
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strategy = TaxonNameDefaultCacheStrategy.NewInstance();
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familyName = TaxonNameFactory.PARSED_BOTANICAL(familyNameString, Rank.FAMILY());
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genusName = TaxonNameFactory.PARSED_BOTANICAL(genusNameString, Rank.GENUS());
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subGenusName = TaxonNameFactory.NewBotanicalInstance(Rank.SUBGENUS());
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subGenusName.setGenusOrUninomial("Genus");
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subGenusName.setInfraGenericEpithet("InfraGenericPart");
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speciesName = TaxonNameFactory.PARSED_BOTANICAL(speciesNameString);
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subSpeciesName = TaxonNameFactory.PARSED_BOTANICAL(subSpeciesNameString);
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author = Person.NewInstance();
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author.setNomenclaturalTitle(authorString);
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exAuthor = Person.NewInstance();
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exAuthor.setNomenclaturalTitle(exAuthorString);
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basAuthor = Person.NewInstance();
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basAuthor.setNomenclaturalTitle(basAuthorString);
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exBasAuthor = Person.NewInstance();
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exBasAuthor.setNomenclaturalTitle(exBasAuthorString);
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citationRef = refFactory.newBook();
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// Gard. Dict. ed. 8, no. 1. 1768.
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citationRef.setTitle("Gard. Dict.");
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//citationRef.setPlacePublished("");
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citationRef.setVolume("1");
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citationRef.setEdition("ed. 8");
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GregorianCalendar testDate = new GregorianCalendar();
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testDate.set(1968, 3, 2);
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VerbatimTimePeriod period = VerbatimTimePeriod.NewVerbatimInstance(testDate);
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citationRef.setDatePublished(period);
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//speciesName.setNomenclaturalMicroReference("89");
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NomenclaturalStatus nomStatus = NomenclaturalStatus.NewInstance(NomenclaturalStatusType.ILLEGITIMATE());
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speciesName.addStatus(nomStatus);
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speciesName.setNomenclaturalReference(citationRef);
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speciesName.setAppendedPhrase("app phrase");
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// subSpeciesName.setNomenclaturalReference(citationRef);
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// subSpeciesName.setAppendedPhrase("app phrase");
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}
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/********* TEST *******************************************/
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/**
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* Test method for {@link eu.etaxonomy.cdm.strategy.cache.name.BotanicNameDefaultCacheStrategy#NewInstance()}.
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*/
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@Test
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public final void testNewInstance() {
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TaxonNameDefaultCacheStrategy cacheStrategy = TaxonNameDefaultCacheStrategy.NewInstance();
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assertNotNull(cacheStrategy);
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}
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/**
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* Test method for {@link eu.etaxonomy.cdm.strategy.cache.name.BotanicNameDefaultCacheStrategy#getNameCache(eu.etaxonomy.cdm.model.common.CdmBase)}.
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*/
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@Test
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public final void testGetNameCache() {
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assertEquals(subSpeciesNameString, subSpeciesName.getNameCache());
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assertNull(subSpeciesNameString, strategy.getNameCache(null));
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}
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/**
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* Test method for {@link eu.etaxonomy.cdm.strategy.cache.name.BotanicNameDefaultCacheStrategy#getTitleCache(eu.etaxonomy.cdm.model.common.CdmBase)}.
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*/
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@Test
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public final void testGetTitleCache() {
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assertNull(subSpeciesNameString, strategy.getTitleCache(null));
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subSpeciesName.setCombinationAuthorship(author);
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subSpeciesName.setExCombinationAuthorship(exAuthor);
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subSpeciesName.setBasionymAuthorship(basAuthor);
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subSpeciesName.setExBasionymAuthorship(exBasAuthor);
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assertEquals(subSpeciesNameString, strategy.getNameCache(subSpeciesName));
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assertEquals(subSpeciesNameString + " (" + exBasAuthorString + " ex " + basAuthorString + ")" + " " + exAuthorString + " ex " + authorString , strategy.getTitleCache(subSpeciesName));
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subSpeciesName.setExCombinationAuthorship(null);
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assertEquals(subSpeciesNameString + " (" + exBasAuthorString + " ex " + basAuthorString + ")" + " " + authorString , strategy.getTitleCache(subSpeciesName));
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subSpeciesName.setExBasionymAuthorship(null);
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assertEquals(subSpeciesNameString + " (" + basAuthorString + ")" + " " + authorString , strategy.getTitleCache(subSpeciesName));
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//Autonym
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subSpeciesName.setInfraSpecificEpithet("alba");
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subSpeciesName.setCombinationAuthorship(author);
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subSpeciesName.setBasionymAuthorship(null);
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subSpeciesName.setExCombinationAuthorship(null);
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subSpeciesName.setExBasionymAuthorship(null);
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//changed 2009-09-04
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assertEquals("Abies alba subsp. alba", strategy.getNameCache(subSpeciesName));
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assertEquals("Abies alba L. subsp. alba", strategy.getTitleCache(subSpeciesName));
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}
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@Test
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public final void testGetFullTitleCache() {
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assertNull("Full title cache of null object should return null", strategy.getFullTitleCache(null));
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//NOTE: Unclear if the date part should contain the full date or only the year. Undefined Behaviour.
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assertEquals("Abies alba app phrase, Gard. Dict., ed. 8, 1. 2.4.1968, nom. illeg.", strategy.getFullTitleCache(speciesName));
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// assertNull(subSpeciesNameString, strategy.getFullTitleCache(null));
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// assertEquals("Abies alba app phrase L. Gard. Dict. ed. 8, 1. 1768, nom. illeg.", strategy.getFullTitleCache(speciesName));
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}
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@Test
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public final void testGetAuthorshipCache() {
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subSpeciesName.setCombinationAuthorship(author);
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assertEquals(authorString, strategy.getAuthorshipCache(subSpeciesName));
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subSpeciesName.setExCombinationAuthorship(exAuthor);
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assertEquals(exAuthorString + " ex " + authorString , strategy.getAuthorshipCache(subSpeciesName));
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subSpeciesName.setBasionymAuthorship(basAuthor);
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assertEquals("(" + basAuthorString + ")" + " " + exAuthorString + " ex " + authorString , strategy.getAuthorshipCache(subSpeciesName));
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subSpeciesName.setExBasionymAuthorship(exBasAuthor);
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assertEquals("(" + exBasAuthorString + " ex " + basAuthorString + ")" + " " + exAuthorString + " ex " + authorString , strategy.getAuthorshipCache(subSpeciesName));
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assertNull(subSpeciesNameString, strategy.getAuthorshipCache(null));
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}
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@Test
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public final void testGetGenusOrUninomialNameCache() {
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assertEquals(familyNameString, strategy.getNameCache(familyName));
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}
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@Test
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public final void testGetInfraGenusTaggedNameCache() {
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String methodName = "getInfraGenusTaggedNameCache";
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Method method = getMethod(TaxonNameDefaultCacheStrategy.class, methodName, INonViralName.class);
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this.getStringValue(method, strategy, subGenusName);
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assertEquals("Genus subg. InfraGenericPart", strategy.getNameCache(subGenusName));
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}
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@Test
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public final void testGetSpeciesNameCache() {
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String nameString = speciesNameString + " " + appendedPhraseString;
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assertEquals(nameString, strategy.getNameCache(speciesName));
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}
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@Test
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public final void testGetInfraSpeciesNameCache() {
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assertEquals(subSpeciesNameString, strategy.getNameCache(subSpeciesName));
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}
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@Test
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public final void testAutonyms() {
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subSpeciesName.setInfraSpecificEpithet("alba");
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subSpeciesName.setCombinationAuthorship(author);
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//changed 2009-09-04
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assertEquals("Abies alba subsp. alba", strategy.getNameCache(subSpeciesName));
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assertEquals("Abies alba L. subsp. alba", strategy.getTitleCache(subSpeciesName));
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}
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@Override
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protected Method getMethod(Class clazz, String methodName, Class paramClazzes){
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Method method;
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try {
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method = clazz.getDeclaredMethod(methodName, paramClazzes);
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} catch (SecurityException e) {
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logger.error("SecurityException " + e.getMessage());
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return null;
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} catch (NoSuchMethodException e) {
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logger.error("NoSuchMethodException " + e.getMessage());
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return null;
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}
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return method;
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}
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}
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