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/**
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* Copyright (C) 2015 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.cdm.api.service.dto;
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import java.net.URI;
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import java.util.ArrayList;
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import java.util.HashMap;
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import java.util.List;
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import java.util.Map;
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import java.util.UUID;
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import org.hibernate.envers.tools.Pair;
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import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
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import eu.etaxonomy.cdm.model.occurrence.DerivationEvent;
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import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
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import eu.etaxonomy.cdm.model.taxon.Taxon;
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/**
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* @author pplitzner
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* @since Mar 26, 2015
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*
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*/
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public class PreservedSpecimenDTO extends DerivateDTO{
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private String accessionNumber;
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private URI preferredStableUri;
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private List<Pair<UUID, String>> associatedTaxa;
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private Map<String, List<String>> types;
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// public PreservedSpecimenDTO(DerivedUnit derivedUnit){
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// super();
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// this.setUuid(derivedUnit.getUuid());
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// this.setTitleCache(derivedUnit.getTitleCache());
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// this.setAccessionNumber(derivedUnit.getAccessionNumber());
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// this.setPreferredStableUri(derivedUnit.getPreferredStableUri());
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//
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// this.setCollectioDTo(new CollectionDTO(HibernateProxyHelper.deproxy(derivedUnit.getCollection())));
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// this.setBarcode(derivedUnit.getBarcode());
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// this.setCatalogNumber(derivedUnit.getCatalogNumber());
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// this.setCollectorsNumber(derivedUnit.getCollectorsNumber());
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// if (derivedUnit.getDerivedFrom() != null){
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// this.setDerivationEvent(new DerivationEventDTO(derivedUnit.getDerivedFrom() ));
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// }
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// if (derivedUnit.getPreservation()!= null){
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// this.setPreservationMethod(derivedUnit.getPreservation().getMaterialMethodText());
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// }
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// this.setRecordBase(derivedUnit.getRecordBasis().getMessage());
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// this.setSources(derivedUnit.getSources());
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// this.setSpecimenTypeDesignations(derivedUnit.getSpecimenTypeDesignations());
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//
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// }
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//
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// public static PreservedSpecimenDTO newInstance(DerivedUnit derivedUnit ){
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// PreservedSpecimenDTO newInstance = new PreservedSpecimenDTO(derivedUnit);
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//
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// return newInstance;
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// }
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/**
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* @param derivedUnit
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*/
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public PreservedSpecimenDTO(DerivedUnit derivedUnit) {
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super(derivedUnit);
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accessionNumber = derivedUnit.getAccessionNumber();
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preferredStableUri = derivedUnit.getPreferredStableUri();
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if (derivedUnit.getCollection() != null){
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setCollectioDTo(new CollectionDTO(HibernateProxyHelper.deproxy(derivedUnit.getCollection())));
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}
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setBarcode(derivedUnit.getBarcode());
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setCatalogNumber(derivedUnit.getCatalogNumber());
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listLabel = derivedUnit.getCatalogNumber();
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setCollectorsNumber(derivedUnit.getCollectorsNumber());
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if (derivedUnit.getDerivedFrom() != null){
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setDerivationEvent(new DerivationEventDTO(HibernateProxyHelper.deproxy(derivedUnit.getDerivedFrom(), DerivationEvent.class )));
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}
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if (derivedUnit.getPreservation()!= null){
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setPreservationMethod(derivedUnit.getPreservation().getMaterialMethodText());
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}
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setRecordBase(derivedUnit.getRecordBasis().getMessage());
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setSources(derivedUnit.getSources());
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setSpecimenTypeDesignations(derivedUnit.getSpecimenTypeDesignations());
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}
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public String getAccessionNumber() {
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return accessionNumber;
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}
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public void setAccessionNumber(String accessionNumber) {
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this.accessionNumber = accessionNumber;
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}
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public Map<String, List<String>> getTypes() {
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return types;
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}
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public void addTypes(String typeStatus, List<String> typedTaxa){
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if(types==null){
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types = new HashMap<String, List<String>>();
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}
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types.put(typeStatus, typedTaxa);
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}
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public List<Pair<UUID, String>> getAssociatedTaxa() {
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return associatedTaxa;
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}
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public void addAssociatedTaxon(Taxon taxon){
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if(associatedTaxa==null){
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associatedTaxa = new ArrayList<Pair<UUID, String>>();
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}
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associatedTaxa.add(new Pair<UUID, String>(taxon.getUuid(), taxon.getTitleCache()));
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}
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public void setPreferredStableUri(URI preferredStableUri) {
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this.preferredStableUri = preferredStableUri;
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}
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public URI getPreferredStableUri() {
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return preferredStableUri;
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}
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}
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