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/**
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* Copyright (C) 2007 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.cdm.io.dwca.in;
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import org.apache.log4j.Logger;
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import eu.etaxonomy.cdm.common.URI;
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import eu.etaxonomy.cdm.database.ICdmDataSource;
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import eu.etaxonomy.cdm.io.common.IImportConfigurator;
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import eu.etaxonomy.cdm.io.common.mapping.IInputTransformer;
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import eu.etaxonomy.cdm.io.stream.StreamImportConfiguratorBase;
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/**
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* @author a.mueller
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* @since 04.06.2013
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*/
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public abstract class DwcaDataImportConfiguratorBase<STATE extends DwcaDataImportStateBase>
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extends StreamImportConfiguratorBase<STATE, URI> implements IImportConfigurator {
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private static final long serialVersionUID = 7091818889753715572L;
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@SuppressWarnings("unused")
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private static final Logger logger = Logger.getLogger(DwcaDataImportConfiguratorBase.class);
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private boolean doSplitRelationshipImport = false;
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private boolean doSynonymRelationships = true;
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private boolean doHigherRankRelationships = true;
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private boolean doLowerRankRelationships = true;
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//taxon
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private boolean deduplicateNamePublishedIn = true;
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private boolean scientificNameIdAsOriginalSourceId = false;
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private DatasetUse datasetUse = DatasetUse.CLASSIFICATION;
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private boolean useSourceReferenceAsSec = false;
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private boolean useParentAsAcceptedIfAcceptedNotExists = true;
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//distribution
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//if set to true the dwc locality is not considered during distribution import
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private boolean excludeLocality = false;
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//reference
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private boolean guessNomenclaturalReferences = false;
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private boolean handleAllRefsAsCitation = false;
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//validation
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private boolean validateRankConsistency = true;
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public enum DatasetUse{
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CLASSIFICATION,
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SECUNDUM,
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ORIGINAL_SOURCE
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}
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public enum ModifiedUse{
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UPDATED,
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MARKER
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}
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protected DwcaDataImportConfiguratorBase(URI uri, ICdmDataSource destination, IInputTransformer defaultTransformer) {
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super(defaultTransformer);
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this.setSource(uri);
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this.setDestination(destination);
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}
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//************************** GETTER / SETTER **********************************/
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public boolean isDeduplicateNamePublishedIn() {
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return deduplicateNamePublishedIn;
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}
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public void setDeduplicateNamePublishedIn(boolean deduplicateNamePublishedIn) {
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this.deduplicateNamePublishedIn = deduplicateNamePublishedIn;
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}
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public void setScientificNameIdAsOriginalSourceId(
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boolean scientificNameIdAsOriginalSourceId) {
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this.scientificNameIdAsOriginalSourceId = scientificNameIdAsOriginalSourceId;
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}
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public boolean isScientificNameIdAsOriginalSourceId() {
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return scientificNameIdAsOriginalSourceId;
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}
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public boolean isDatasetsAsClassifications() {
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return this.datasetUse.equals(DatasetUse.CLASSIFICATION);
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}
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//exclude Locality
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/**
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* Should the locality attribute in distributions be excluded from creating
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* named areas used in distributions?
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*/
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public boolean isExcludeLocality() {
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return excludeLocality;
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}
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/**
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* @see #isExcludeLocality()
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*/
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public void setExcludeLocality(boolean excludeLocality) {
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this.excludeLocality = excludeLocality;
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}
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public boolean isValidateRankConsistency() {
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return validateRankConsistency;
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}
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public void setValidateRankConsistency(boolean validateRankConsistency) {
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this.validateRankConsistency = validateRankConsistency;
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}
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public boolean isDatasetsAsSecundumReference() {
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return this.datasetUse.equals(DatasetUse.SECUNDUM);
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}
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public boolean isDatasetsAsOriginalSource() {
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return this.datasetUse.equals(DatasetUse.ORIGINAL_SOURCE);
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}
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public void setDatasetUse(DatasetUse datasetUse) {
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this.datasetUse = datasetUse;
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}
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public boolean isGuessNomenclaturalReferences() {
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return guessNomenclaturalReferences;
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}
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public void setGuessNomenclaturalReferences(boolean guessNomenclaturalReferences) {
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this.guessNomenclaturalReferences = guessNomenclaturalReferences;
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}
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public boolean isHandleAllRefsAsCitation() {
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return handleAllRefsAsCitation;
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}
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public void setHandleAllRefsAsCitation(boolean handleAllRefsAsCitation) {
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this.handleAllRefsAsCitation = handleAllRefsAsCitation;
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}
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public boolean isUseSourceReferenceAsSec() {
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return useSourceReferenceAsSec;
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}
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public void setUseSourceReferenceAsSec(boolean useSourceReferenceAsSec) {
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this.useSourceReferenceAsSec = useSourceReferenceAsSec;
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}
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public boolean isUseParentAsAcceptedIfAcceptedNotExists() {
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return useParentAsAcceptedIfAcceptedNotExists;
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}
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public void setUseParentAsAcceptedIfAcceptedNotExists(boolean useParentAsAcceptedIfAcceptedNotExists) {
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this.useParentAsAcceptedIfAcceptedNotExists = useParentAsAcceptedIfAcceptedNotExists;
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}
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public boolean isDoSplitRelationshipImport() {
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return doSplitRelationshipImport;
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}
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public void setDoSplitRelationshipImport(boolean doSplitRelationshipImport) {
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this.doSplitRelationshipImport = doSplitRelationshipImport;
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}
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public boolean isDoSynonymRelationships() {
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return doSynonymRelationships;
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}
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public void setDoSynonymRelationships(boolean doSynonymRelationships) {
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this.doSynonymRelationships = doSynonymRelationships;
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}
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public boolean isDoHigherRankRelationships() {
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return doHigherRankRelationships;
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}
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public void setDoHigherRankRelationships(boolean doHigherRankRelationships) {
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this.doHigherRankRelationships = doHigherRankRelationships;
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}
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public boolean isDoLowerRankRelationships() {
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return doLowerRankRelationships;
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}
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public void setDoLowerRankRelationships(boolean doLowerRankRelationships) {
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this.doLowerRankRelationships = doLowerRankRelationships;
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}
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}
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