EDIT

/**

* Copyright (C) 2015 EDIT

* European Distributed Institute of Taxonomy

* http://www.e-taxonomy.eu

*

* The contents of this file are subject to the Mozilla Public License Version 1.1

* See LICENSE.TXT at the top of this package for the full license terms.

*/

package eu.etaxonomy.cdm.api.service.dto;

import java.io.Serializable;

import java.net.URI;

import java.util.ArrayList;

import java.util.List;

import java.util.UUID;

/**

 * @author pplitzner

 * @since Mar 26, 2015

 *

 */

public class DerivateDataDTO implements Serializable {

    private static final long serialVersionUID = 8329871164348514709L;

    private List<Link> specimenScans;

    private List<MolecularData> molecularDataList;

    private List<Link> detailImages;

    private List<UUID> specimenScanUuids;

    private List<UUID> detailImageUuids;

    /**

     * @return the molecularData

     */

    public List<MolecularData> getMolecularDataList() {

        return molecularDataList;

    }

    public MolecularData addProviderLink(Link providerLink) {

        if(this.molecularDataList==null){

            molecularDataList = new ArrayList<MolecularData>();

        }

        MolecularData molecularData = new MolecularData(providerLink);

        this.molecularDataList.add(molecularData);

        return molecularData;

    }

    /**

     * @return the specimenScans

     */

    public List<Link> getSpecimenScans() {

        return specimenScans;

    }

    public void addSpecimenScan(URI uri, String linkText){

        if(specimenScans==null){

            specimenScans = new ArrayList<Link>();

        }

        specimenScans.add(new Link(uri, linkText));

    }

    /**

     * @return the detailImages

     */

    public List<Link> getDetailImages() {

        return detailImages;

    }

    public void addDetailImage(URI uri, String motif){

        if(detailImages==null){

            detailImages = new ArrayList<Link>();

        }

        detailImages.add(new Link(uri, motif));

    }

    /**

     * @return the specimenScanUuids

     */

    public List<UUID> getSpecimenScanUuids() {

        return specimenScanUuids;

    }

    public void addSpecimenScanUuid(UUID uuid){

        if(specimenScanUuids==null){

            specimenScanUuids = new ArrayList<UUID>();

        }

        specimenScanUuids.add(uuid);

    }

    /**

     * @return the detailImageUuids

     */

    public List<UUID> getDetailImageUuids() {

        return detailImageUuids;

    }

    public void addDetailImageUuid(UUID uuid){

        if(detailImageUuids==null){

            detailImageUuids = new ArrayList<UUID>();

        }

        detailImageUuids.add(uuid);

    }

    public class MolecularData implements Serializable{

        private static final long serialVersionUID = -3509828381796659200L;

        private final Link providerLink;

        private List<ContigFile> contigFiles;

        public MolecularData(Link providerLink) {

            super();

            this.providerLink = providerLink;

        }

        public ContigFile addContigFile(Link contigLink){

            if(contigFiles==null){

                contigFiles = new ArrayList<ContigFile>();

            }

            ContigFile contigFile = new ContigFile(contigLink);

            contigFiles.add(contigFile);

            return contigFile;

        }

        public synchronized Link getProviderLink() {

            return providerLink;

        }

        public List<ContigFile> getContigFiles() {

            return contigFiles;

        }

    }

    public class ContigFile implements Serializable{

        private final Link contigLink;

        private List<Link> primerLinks;

        public ContigFile(Link contigLink) {

            this.contigLink = contigLink;

        }

        public void addPrimerLink(URI uri, String linkText){

            if(primerLinks==null){

                primerLinks = new ArrayList<Link>();

            }

            primerLinks.add(new Link(uri, linkText));

        }

        public Link getContigLink() {

            return contigLink;

        }

        public List<Link> getPrimerLinks() {

            return primerLinks;

        }

    }

    public static class Link implements Serializable{

        private static final long serialVersionUID = 6635385359662624579L;

        private String linkText;

        private URI uri;

        public Link(URI uri, String linkText) {

            super();

            this.linkText = linkText;

            this.uri = uri;

        }

        /**

         * @return the linkText

         */

        public synchronized String getLinkText() {

            return linkText;

        }

        /**

         * @param linkText the linkText to set

         */

        public synchronized void setLinkText(String linkText) {

            this.linkText = linkText;

        }

        /**

         * @return the uri

         */

        public synchronized URI getUri() {

            return uri;

        }

        /**

         * @param uri the uri to set

         */

        public synchronized void setUri(URI uri) {

            this.uri = uri;

        }

        /* (non-Javadoc)

         * @see java.lang.Object#hashCode()

         */

        @Override

        public int hashCode() {

            final int prime = 31;

            int result = 1;

            result = prime * result + ((linkText == null) ? 0 : linkText.hashCode());

            result = prime * result + ((uri == null) ? 0 : uri.hashCode());

            return result;

        }

        /* (non-Javadoc)

         * @see java.lang.Object#equals(java.lang.Object)

         */

        @Override

        public boolean equals(Object obj) {

            if (this == obj) {

                return true;

            }

            if (obj == null) {

                return false;

            }

            if (getClass() != obj.getClass()) {

                return false;

            }

            Link other = (Link) obj;

            if (linkText == null) {

                if (other.linkText != null) {

                    return false;

                }

            } else if (!linkText.equals(other.linkText)) {

                return false;

            }

            if (uri == null) {

                if (other.uri != null) {

                    return false;

                }

            } else if (!uri.equals(other.uri)) {

                return false;

            }

            return true;

        }

    }

}