Revision d71868a2
Added by Andreas Müller about 3 years ago
| cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonNodeDaoHibernateImpl.java | ||
|---|---|---|
| 683 | 683 |
boolean overwriteExisting, boolean includeSharedTaxa, boolean emptySecundumDetail) {
|
| 684 | 684 |
String queryStr = forSubtreeAcceptedQueryStr(includeSharedTaxa, subTreeIndex, false, SelectMode.COUNT); |
| 685 | 685 |
if (!overwriteExisting){
|
| 686 |
queryStr += " AND t.sec IS NULL "; |
|
| 686 |
queryStr += " AND t.secSource.citation IS NULL ";
|
|
| 687 | 687 |
} |
| 688 | 688 |
return countResult(queryStr); |
| 689 | 689 |
} |
| ... | ... | |
| 698 | 698 |
boolean overwriteExisting, boolean includeSharedTaxa, boolean emptySecundumDetail) {
|
| 699 | 699 |
String queryStr = forSubtreeSynonymQueryStr(includeSharedTaxa, subTreeIndex, false, SelectMode.COUNT); |
| 700 | 700 |
if (!overwriteExisting){
|
| 701 |
queryStr += " AND syn.sec IS NULL "; |
|
| 701 |
queryStr += " AND syn.secSource.citation IS NULL ";
|
|
| 702 | 702 |
} |
| 703 | 703 |
return countResult(queryStr); |
| 704 | 704 |
} |
| ... | ... | |
| 722 | 722 |
|
| 723 | 723 |
String queryStr = forSubtreeAcceptedQueryStr(includeSharedTaxa, subTreeIndex, false, SelectMode.ID); |
| 724 | 724 |
if (!overwriteExisting){
|
| 725 |
queryStr += " AND t.sec IS NULL "; |
|
| 725 |
queryStr += " AND t.secSource.citation IS NULL ";
|
|
| 726 | 726 |
} |
| 727 | 727 |
return setSecundum(newSec, emptyDetail, queryStr, monitor); |
| 728 | 728 |
|
| ... | ... | |
| 734 | 734 |
|
| 735 | 735 |
String queryStr = forSubtreeSynonymQueryStr(includeSharedTaxa, subTreeIndex, false, SelectMode.ID); |
| 736 | 736 |
if (!overwriteExisting){
|
| 737 |
queryStr += " AND syn.sec IS NULL "; |
|
| 737 |
queryStr += " AND syn.secSource.citation IS NULL ";
|
|
| 738 | 738 |
} |
| 739 | 739 |
return setSecundum(newSec, emptyDetail, queryStr, monitor); |
| 740 | 740 |
} |
| ... | ... | |
| 746 | 746 |
List<List<Integer>> partitionList = splitIdList(query.list(), DEFAULT_PARTITION_SIZE); |
| 747 | 747 |
for (List<Integer> taxonIdList : partitionList){
|
| 748 | 748 |
List<TaxonBase> taxonList = taxonDao.loadList(taxonIdList, null, null); |
| 749 |
for (TaxonBase taxonBase : taxonList){
|
|
| 749 |
for (TaxonBase<?> taxonBase : taxonList){
|
|
| 750 | 750 |
if (taxonBase != null){
|
| 751 | 751 |
taxonBase = taxonDao.load(taxonBase.getUuid()); |
| 752 | 752 |
taxonBase.setSec(newSec); |
Also available in: Unified diff
ref #9327 add sec source to TaxonBase (with few open issues)