EDIT

/**

* Copyright (C) 2007 EDIT

* European Distributed Institute of Taxonomy 

* http://www.e-taxonomy.eu

* 

* The contents of this file are subject to the Mozilla Public License Version 1.1

* See LICENSE.TXT at the top of this package for the full license terms.

*/

package eu.etaxonomy.cdm.model.name;

import javax.persistence.Entity;

import javax.persistence.FetchType;

import javax.persistence.ManyToOne;

import javax.persistence.Transient;

import javax.xml.bind.annotation.XmlAccessType;

import javax.xml.bind.annotation.XmlAccessorType;

import javax.xml.bind.annotation.XmlElement;

import javax.xml.bind.annotation.XmlIDREF;

import javax.xml.bind.annotation.XmlRootElement;

import javax.xml.bind.annotation.XmlSchemaType;

import javax.xml.bind.annotation.XmlType;

import org.apache.log4j.Logger;

import org.hibernate.annotations.Cascade;

import org.hibernate.annotations.CascadeType;

import org.hibernate.envers.Audited;

import eu.etaxonomy.cdm.model.reference.Reference;

/**

 * The class representing a typification of a {@link TaxonNameBase taxon name} with a {@link Rank rank}

 * above "species aggregate" by another taxon name.<BR>

 * According to nomenclature a type of a genus name or of any subdivision of a

 * genus can only be a species name. A type of a family name or of any

 * subdivision of a family is a genus name.<BR>

 * Moreover the designation of a particular taxon name as a type might be

 * nomenclaturally rejected or conserved. Depending on the date of publication,

 * the same typification could be rejected according to one reference and later

 * be conserved according to another reference, but a name type designation

 * cannot be simultaneously rejected and conserved.<BR>

 * Name type designations are treated as {@link TypeDesignationBase type designations}

 * and not as {@link NameRelationship name relationships}.

 * 

 * @see		TypeDesignationBase

 * @see		SpecimenTypeDesignation

 * @author	m.doering

 * @version 1.0

 * @created 08-Nov-2007 13:06:38

 */

@XmlRootElement(name = "NameTypeDesignation")

@XmlAccessorType(XmlAccessType.FIELD)

@XmlType(name = "NameTypeDesignation", propOrder = {

    "rejectedType",

    "conservedType",

    "typeName"

})

@Entity

@Audited

public class NameTypeDesignation extends TypeDesignationBase<NameTypeDesignationStatus> implements ITypeDesignation, Cloneable {

	private static final long serialVersionUID = 8478663508862210879L;

	final static Logger logger = Logger.getLogger(NameTypeDesignation.class);

	@XmlElement(name = "IsRejectedType")

	private boolean rejectedType;

	@XmlElement(name = "IsConservedType")

	private boolean conservedType;

	@XmlElement(name = "TypeName")

	@XmlIDREF

	@XmlSchemaType(name = "IDREF")

	@ManyToOne(fetch = FetchType.LAZY)

	@Cascade({CascadeType.SAVE_UPDATE,CascadeType.MERGE})

	private TaxonNameBase typeName;

	public static NameTypeDesignation NewInstance() {

		return new NameTypeDesignation();

	}

	// ************* CONSTRUCTORS *************/	

	/** 

	 * Class constructor: creates a new empty name type designation.

	 * 

	 * @see	#NameTypeDesignation(TaxonNameBase, Reference, String, String, boolean, boolean, boolean)

	 */

	protected NameTypeDesignation() {

	}

	/**

	 * Class constructor: creates a new name type designation instance

	 * (including its {@link eu.etaxonomy.cdm.model.reference.Reference reference source} and eventually

	 * the taxon name string originally used by this reference when establishing

	 * the former designation).

	 * 

	 * @param typeName				the taxon name used as a type 

	 * @param citation				the reference source for the new designation

	 * @param citationMicroReference	the string with the details describing the exact localisation within the reference

	 * @param originalNameString	the taxon name string used originally in the reference source for the new designation

	 * @param isRejectedType		the boolean flag indicating whether the competent authorities rejected

	 * 								<i>this</i> name type designation

	 * @param isConservedType		the boolean flag indicating whether the competent authorities conserved

	 * 								<i>this</i> name type designation

	 * @param isNotDesignated		the boolean flag indicating whether there is no name type at all for 

	 * 								<i>this</i> name type designation

	 * @see							#NameTypeDesignation()

	 * @see							TypeDesignationBase#isNotDesignated()

	 * @see							TaxonNameBase#addNameTypeDesignation(TaxonNameBase, Reference, String, String, boolean, boolean, boolean, boolean, boolean)

	 */

	protected NameTypeDesignation(TaxonNameBase typeName, NameTypeDesignationStatus status,

			Reference citation, String citationMicroReference, String originalNameString) {

		super(citation, citationMicroReference, originalNameString);

		this.setTypeName(typeName);

		this.setTypeStatus(status);

	}

	/**

	 * Class constructor: creates a new name type designation instance

	 * (including its {@link eu.etaxonomy.cdm.model.reference.Reference reference source} and eventually

	 * the taxon name string originally used by this reference when establishing

	 * the former designation).

	 * 

	 * @param typeName				the taxon name used as a type 

	 * @param citation				the reference source for the new designation

	 * @param citationMicroReference	the string with the details describing the exact localisation within the reference

	 * @param originalNameString	the taxon name string used originally in the reference source for the new designation

	 * @param isRejectedType		the boolean flag indicating whether the competent authorities rejected

	 * 								<i>this</i> name type designation

	 * @param isConservedType		the boolean flag indicating whether the competent authorities conserved

	 * 								<i>this</i> name type designation

	 * @param isNotDesignated		the boolean flag indicating whether there is no name type at all for 

	 * 								<i>this</i> name type designation

	 * @see							#NameTypeDesignation()

	 * @see							TypeDesignationBase#isNotDesignated()

	 * @see							TaxonNameBase#addNameTypeDesignation(TaxonNameBase, Reference, String, String, boolean, boolean, boolean, boolean, boolean)

	 */

	protected NameTypeDesignation(	TaxonNameBase typeName, 

									Reference citation, 

									String citationMicroReference,

									String originalNameString, 

									NameTypeDesignationStatus status, 

									boolean rejectedType, 

									boolean conservedType, 

									boolean isNotDesignated

								) {

		this(typeName, status, citation, citationMicroReference, originalNameString);

		this.setNotDesignated(isNotDesignated);

		this.rejectedType = rejectedType;

		this.conservedType = conservedType;

	}

	//********* METHODS **************************************/

	/* (non-Javadoc)

	 * @see eu.etaxonomy.cdm.model.name.TypeDesignationBase#removeType()

	 */

	@Override

	public void removeType() {

		this.typeName = null;	

	}

	/** 

	 * Returns the {@link TaxonNameBase taxon name} that plays the role of the

	 * taxon name type in <i>this</i> taxon name type designation. The {@link Rank rank}

	 * of the taxon name type must be "species".

	 */

	public TaxonNameBase getTypeName(){

		return this.typeName;

	}

	/**

	 * @see  #getTypeName()

	 */

	public void setTypeName(TaxonNameBase typeName){

		this.typeName = typeName;

	}

	/** 

	 * Returns the boolean value "true" if the competent authorities decided to

	 * reject the use of the species taxon name as the type for <i>this</i> taxon

	 * name type designation.

	 *  

	 * @see   #isConservedType()

	 */

	public boolean isRejectedType(){

		return this.rejectedType;

	}

	/**

	 * @see  #isRejectedType()

	 */

	public void setRejectedType(boolean rejectedType){

		this.rejectedType = rejectedType;

	}

	/** 

	 * Returns the boolean value "true" if the competent authorities decided to

	 * conserve the use of the species taxon name as the type for <i>this</i> taxon

	 * name type designation.

	 *  

	 * @see   #isRejectedType()

	 */

	public boolean isConservedType(){

		return this.conservedType;

	}

	/**

	 * @see  #isConservedType()

	 */

	public void setConservedType(boolean conservedType){

		this.conservedType = conservedType;

	}

	@Transient

	public boolean isLectoType() {

		if (getTypeStatus() == null) {

			return false;

		}

		return getTypeStatus().isLectotype();

	}

	/** 

	 * Returns the boolean value "true" if the use of the species {@link TaxonNameBase taxon name}

	 * as the type for <i>this</i> taxon name type designation was posterior to the

	 * publication of the typified taxon name. In this case the taxon name type

	 * designation should have a {@link eu.etaxonomy.cdm.model.reference.Reference reference} that is different to the

	 * {@link TaxonNameBase#getNomenclaturalReference() nomenclatural reference} of the typified taxon name.

	 *  

	 * @see   ReferencedEntityBase#getCitation()

	 */

//	/* (non-Javadoc)

//	 * @see eu.etaxonomy.cdm.model.name.ITypeDesignation#isLectoType()

//	 */

//	public boolean isLectoType() {

//		return lectoType;

//	}

//

//	/**

//	 * @see   #isLectoType()

//	 */

//	public void setLectoType(boolean lectoType) {

//		this.lectoType = lectoType;

//	}

//*********************** CLONE ********************************************************/

	/** 

	 * Clones <i>this</i> name type. This is a shortcut that enables to create

	 * a new instance that differs only slightly from <i>this</i> name type by

	 * modifying only some of the attributes.

	 * 

	 * @see eu.etaxonomy.cdm.model.name.TypeDesignationBase#clone()

	 * @see java.lang.Object#clone()

	 */

	@Override

	public Object clone() {

		NameTypeDesignation result;

		try {

			result = (NameTypeDesignation)super.clone();

			//no changes to: rejectedType, conservedType, typeName

			return result;

		} catch (CloneNotSupportedException e) {

			logger.warn("Object does not implement cloneable");

			e.printStackTrace();

			return null;

		}

	}

}