Revision d3c71277
Added by Andreas Müller about 8 years ago
cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/geo/FloraCubaCondensedDistributionComposer.java | ||
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import java.util.ArrayList; |
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import java.util.Collection; |
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import java.util.Collections; |
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import java.util.HashMap; |
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import java.util.HashSet; |
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import java.util.List; |
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import org.apache.log4j.Logger; |
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import eu.etaxonomy.cdm.api.service.dto.CondensedDistribution; |
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import eu.etaxonomy.cdm.model.common.CdmBase; |
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import eu.etaxonomy.cdm.model.common.Language; |
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import eu.etaxonomy.cdm.model.common.OrderedTermVocabulary; |
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import eu.etaxonomy.cdm.model.description.Distribution; |
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import eu.etaxonomy.cdm.model.description.PresenceAbsenceTerm; |
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import eu.etaxonomy.cdm.model.location.NamedArea; |
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foreignStatusUuids = new HashSet<UUID>(); |
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foreignStatusUuids.add(PresenceAbsenceTerm.INTRODUCED().getUuid()); |
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foreignStatusUuids.add(PresenceAbsenceTerm.INTRODUCED_NATURALIZED().getUuid()); |
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foreignStatusUuids.add(PresenceAbsenceTerm.INTRODUCED_ADVENTITIOUS().getUuid()); |
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foreignStatusUuids.add(PresenceAbsenceTerm.INTRODUCED_CULTIVATED().getUuid()); |
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foreignStatusUuids.add(PresenceAbsenceTerm.NATURALISED().getUuid()); |
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foreignStatusUuids.add(PresenceAbsenceTerm.CULTIVATED().getUuid()); |
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// foreignStatusUuids = new HashSet<UUID>();
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// foreignStatusUuids.add(PresenceAbsenceTerm.INTRODUCED().getUuid());
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// foreignStatusUuids.add(PresenceAbsenceTerm.INTRODUCED_NATURALIZED().getUuid());
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// foreignStatusUuids.add(PresenceAbsenceTerm.INTRODUCED_ADVENTITIOUS().getUuid());
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// foreignStatusUuids.add(PresenceAbsenceTerm.INTRODUCED_CULTIVATED().getUuid());
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// foreignStatusUuids.add(PresenceAbsenceTerm.NATURALISED().getUuid());
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// foreignStatusUuids.add(PresenceAbsenceTerm.CULTIVATED().getUuid());
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} |
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List<Language> langs) { |
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//1. order by PresenceAbsenceTerms |
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Map<PresenceAbsenceTerm, Collection<NamedArea>> byStatus = new HashMap<PresenceAbsenceTerm, Collection<NamedArea>>(); |
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for(Distribution d : filteredDistributions) { |
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PresenceAbsenceTerm status = d.getStatus(); |
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if(status == null) { |
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continue; |
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} |
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if(!byStatus.containsKey(status)) { |
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byStatus.put(status, new HashSet<NamedArea>()); |
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} |
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byStatus.get(status).add(d.getArea()); |
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// Map<PresenceAbsenceTerm, Collection<NamedArea>> byStatus = new HashMap<PresenceAbsenceTerm, Collection<NamedArea>>(); |
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// for(Distribution d : filteredDistributions) { |
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// PresenceAbsenceTerm status = d.getStatus(); |
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// if(status == null) { |
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// continue; |
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// } |
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// if(!byStatus.containsKey(status)) { |
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// byStatus.put(status, new HashSet<NamedArea>()); |
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// } |
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// byStatus.get(status).add(d.getArea()); |
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// } |
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// //2. build the area hierarchy |
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// for(PresenceAbsenceTerm status : byStatus.keySet()) { |
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// |
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// Map<NamedArea, AreaNode> areaNodeMap = new HashMap<NamedArea, AreaNode>(); |
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// |
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// for(NamedArea area : byStatus.get(status)) { |
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// AreaNode node; |
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// if(!areaNodeMap.containsKey(area)) { |
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// // putting area into hierarchy as node |
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// node = new AreaNode(area); |
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// areaNodeMap.put(area, node); |
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// } else { |
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// // is parent of another and thus already has a node |
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// node = areaNodeMap.get(area); |
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// } |
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// |
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// NamedArea parent = findParentIn(area, byStatus.get(status)); |
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// if(parent != null) { |
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// AreaNode parentNode; |
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// if(!areaNodeMap.containsKey(parent)) { |
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// parentNode = new AreaNode(parent); |
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// areaNodeMap.put(parent, parentNode); |
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// } else { |
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// parentNode = areaNodeMap.get(parent); |
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// } |
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// parentNode.addSubArea(node); |
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// } |
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// } |
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// |
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// //3. find root nodes |
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// Set<AreaNode>hierarchy = new HashSet<AreaNode>(); |
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// for(AreaNode node : areaNodeMap.values()) { |
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// if(!node.hasParent()) { |
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// hierarchy.add(node); |
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// } |
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// } |
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if (filteredDistributions == null || filteredDistributions.isEmpty()){ |
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return condensedDistribution; |
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} |
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OrderedTermVocabulary<NamedArea> areaVocabulary = CdmBase.deproxy(filteredDistributions.iterator().next().getArea().getVocabulary(), OrderedTermVocabulary.class); |
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for (NamedArea area : areaVocabulary.getOrderedTerms()){ |
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//2. build the area hierarchy |
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for(PresenceAbsenceTerm status : byStatus.keySet()) { |
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Map<NamedArea, AreaNode> areaNodeMap = new HashMap<NamedArea, AreaNode>(); |
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for(NamedArea area : byStatus.get(status)) { |
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AreaNode node; |
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if(!areaNodeMap.containsKey(area)) { |
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// putting area into hierarchy as node |
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node = new AreaNode(area); |
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areaNodeMap.put(area, node); |
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} else { |
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// is parent of another and thus already has a node |
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node = areaNodeMap.get(area); |
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} |
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NamedArea parent = findParentIn(area, byStatus.get(status)); |
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if(parent != null) { |
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AreaNode parentNode; |
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if(!areaNodeMap.containsKey(parent)) { |
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parentNode = new AreaNode(parent); |
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areaNodeMap.put(parent, parentNode); |
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} else { |
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parentNode = areaNodeMap.get(parent); |
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} |
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parentNode.addSubArea(node); |
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} |
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if (area.getPartOf() != null){ |
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continue; //subarea are handled later |
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} |
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StringBuilder areaStatusString = new StringBuilder(); |
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Distribution distribution = getDistribution(area, filteredDistributions); |
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PresenceAbsenceTerm status = distribution.getStatus(); |
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//3. find root nodes |
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Set<AreaNode>hierarchy = new HashSet<AreaNode>(); |
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for(AreaNode node : areaNodeMap.values()) { |
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if(!node.hasParent()) { |
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hierarchy.add(node); |
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} |
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} |
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//4. replace the area by the abbreviated representation and add symbols |
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for(AreaNode node : hierarchy) { |
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StringBuilder areaStatusString = new StringBuilder(); |
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String statusSymbol = statusSymbol(status); |
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areaStatusString.append(statusSymbol); |
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String statusSymbol = statusSymbol(status); |
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areaStatusString.append(statusSymbol); |
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String areaLabel = node.area.getPreferredRepresentation(langs).getAbbreviatedLabel(); |
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areaStatusString.append(areaLabel); |
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if(!node.subAreas.isEmpty()) { |
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areaStatusString.append('('); |
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subAreaLabels(langs, node.subAreas, areaStatusString, statusSymbol, areaLabel); |
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areaStatusString.append(')'); |
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} |
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if(isForeignStatus(status)) { |
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condensedDistribution.addForeignDistributionItem(status, areaStatusString.toString(), areaLabel); |
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} else { |
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condensedDistribution.addIndigenousDistributionItem(status, areaStatusString.toString(), areaLabel); |
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} |
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String areaLabel = area.getIdInVocabulary(); //TODO if not exist use abbrevLabel |
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areaStatusString.append(areaLabel); |
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if(!area.getIncludes().isEmpty()) { |
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areaStatusString.append('('); |
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subAreaLabels(langs, area.getIncludes(), areaStatusString, statusSymbol, areaLabel); |
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areaStatusString.append(')'); |
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} |
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// if(isForeignStatus(status)) { |
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// condensedDistribution.addForeignDistributionItem(status, areaStatusString.toString(), areaLabel); |
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// } else { |
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condensedDistribution.addIndigenousDistributionItem(status, areaStatusString.toString(), areaLabel); |
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// } |
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} |
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// } |
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// //5. order the condensedDistributions alphabetically |
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// // FIXME |
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condensedDistribution.sortForeign(); |
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condensedDistribution.sortIndigenous(); |
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// condensedDistribution.sortForeign();
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// condensedDistribution.sortIndigenous();
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return condensedDistribution; |
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} |
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/** |
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* @param area |
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* @param filteredDistributions |
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* @return |
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*/ |
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private Distribution getDistribution(NamedArea area, Collection<Distribution> filteredDistributions) { |
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for (Distribution dist : filteredDistributions){ |
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if (dist.getArea() != null && dist.getArea().equals(area)){ |
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return dist; |
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} |
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} |
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return null; |
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} |
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/** |
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* @param status |
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* @return |
... | ... | |
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* @param areaString |
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* @param statusSymbol |
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*/ |
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private void subAreaLabels(List<Language> langs, Collection<AreaNode> nodes, StringBuilder areaString, String statusSymbol, String parentLabel) {
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private void subAreaLabels(List<Language> langs, Collection<NamedArea> nodes, StringBuilder areaString, String statusSymbol, String parentLabel) {
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//TODO very redundant with main method |
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List<String> subAreaLabels = new ArrayList<String>(); |
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for(AreaNode node : nodes) {
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for(NamedArea area : nodes) {
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StringBuilder subAreaString = new StringBuilder(); |
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subAreaString.append(statusSymbol); |
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String areaLabel = node.area.getPreferredRepresentation(langs).getAbbreviatedLabel();
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String areaLabel = area.getIdInVocabulary() != null ? area.getIdInVocabulary() :area.getPreferredRepresentation(langs).getAbbreviatedLabel();
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String cleanSubAreaLabel = StringUtils.replaceEach(areaLabel, new String[] {parentLabel, "(", ")"}, new String[] {"", "", ""}); |
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subAreaString.append(cleanSubAreaLabel); |
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if(!node.subAreas.isEmpty()) {
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if(!area.getIncludes().isEmpty()) {
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subAreaString.append('('); |
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subAreaLabels(langs, node.subAreas, subAreaString, statusSymbol, areaLabel);
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subAreaLabels(langs, area.getIncludes(), subAreaString, statusSymbol, areaLabel);
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subAreaString.append(')'); |
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} |
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subAreaLabels.add(subAreaString.toString()); |
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} |
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Collections.sort(subAreaLabels); |
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// Collections.sort(subAreaLabels);
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areaString.append(StringUtils.join(subAreaLabels, " ")); |
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} |
Also available in: Unified diff
First implementatio for Cuban Condensed Distribution String #5682