Revision cc95089b
Added by Andreas Kohlbecker about 7 years ago
| cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/TaxonServiceSearchTaxaAndNamesTest.java | ||
|---|---|---|
| 126 | 126 |
* {@link eu.etaxonomy.cdm.api.service.TaxonServiceImpl#findTaxaAndNames(eu.etaxonomy.cdm.api.service.config.IFindTaxaAndNamesConfigurator)}
|
| 127 | 127 |
* . |
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*/ |
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/** |
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* This test permutes through all search mode combinations. |
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* |
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* 7 Accepted Taxa |
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* 1 Synonym |
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* 1 misapplied which is also in the set of accepted |
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* 2 Names without taxa |
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* |
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*/ |
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@Test |
| 130 | 139 |
@DataSet |
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public final void testFindTaxaAndNames() {
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IFindTaxaAndNamesConfigurator<?> conf = new FindTaxaAndNamesConfiguratorImpl(); |
| 134 | 143 |
conf.setTitleSearchString("Abies*");
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//conf.setClassification(classificationService.load(UUID.fromString(CLASSIFICATION_UUID))); |
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conf.setMatchMode(MatchMode.BEGINNING); |
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// --------------------------------------------------------- |
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|
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setTaxaAndNamesModes(conf, true, true, true, true, true); |
| 139 | 149 |
Pager<IdentifiableEntity> pager = taxonService.findTaxaAndNames(conf); |
| 140 | 150 |
logSearchResults(pager, Level.DEBUG); |
| ... | ... | |
| 150 | 160 |
|
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setTaxaAndNamesModes(conf, false, false, true, true, true); |
| 152 | 162 |
pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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//logSearchResults(pager, Level.DEBUG);
|
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assertEquals(3, pager.getRecords().size()); |
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// --------------------------------------------------------- |
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|
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setTaxaAndNamesModes(conf, true, true, false, true, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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assertEquals(10, pager.getRecords().size()); |
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|
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// FIXME org.hibernate.QueryParameterException: could not locate named parameter [taxa] |
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// setTaxaAndNamesModes(conf, false, true, false, true, true); |
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// pager = taxonService.findTaxaAndNames(conf); |
| 163 | 176 |
// assertEquals(3, pager.getRecords().size()); |
| 164 | 177 |
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setTaxaAndNamesModes(conf, true, false, false, true, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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assertEquals(9, pager.getRecords().size()); |
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|
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setTaxaAndNamesModes(conf, false, false, false, true, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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assertEquals(3, pager.getRecords().size()); |
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// ========================================================= |
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|
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setTaxaAndNamesModes(conf, true, true, true, false, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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// logSearchResults(pager, Level.DEBUG); |
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assertEquals(10, pager.getRecords().size()); |
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|
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// FIXME the Synonym Abies subalpina missing in result set |
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// setTaxaAndNamesModes(conf, false, true, true, false, true); |
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// pager = taxonService.findTaxaAndNames(conf); |
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// logSearchResults(pager, Level.DEBUG); |
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// assertEquals(3, pager.getRecords().size()); |
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|
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setTaxaAndNamesModes(conf, true, false, true, false, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(9, pager.getRecords().size()); |
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|
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setTaxaAndNamesModes(conf, false, false, true, false, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(2, pager.getRecords().size()); |
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|
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// --------------------------------------------------------- |
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|
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setTaxaAndNamesModes(conf, true, true, false, false, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(10, pager.getRecords().size()); |
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|
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setTaxaAndNamesModes(conf, false, true, false, false, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(3, pager.getRecords().size()); |
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|
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setTaxaAndNamesModes(conf, true, false, false, false, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(9, pager.getRecords().size()); |
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|
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// only names without taxa |
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// - Abies borisii-regis |
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// - Abies lasio |
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setTaxaAndNamesModes(conf, false, false, false, false, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(2, pager.getRecords().size()); |
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|
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// ========================================================= |
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|
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setTaxaAndNamesModes(conf, true, true, true, true, false); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(8, pager.getRecords().size()); |
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|
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setTaxaAndNamesModes(conf, false, true, true, true, false); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(1, pager.getRecords().size()); |
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|
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setTaxaAndNamesModes(conf, true, false, true, true, false); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(7, pager.getRecords().size()); |
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|
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setTaxaAndNamesModes(conf, false, false, true, true, false); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(1, pager.getRecords().size()); |
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|
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// --------------------------------------------------------- |
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|
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setTaxaAndNamesModes(conf, true, true, false, true, false); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(8, pager.getRecords().size()); |
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|
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// FIXME org.hibernate.QueryParameterException: could not locate named parameter [taxa] |
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// setTaxaAndNamesModes(conf, false, true, false, true, false); |
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// pager = taxonService.findTaxaAndNames(conf); |
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// logSearchResults(pager, Level.DEBUG); |
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// assertEquals(2, pager.getRecords().size()); |
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|
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setTaxaAndNamesModes(conf, true, false, false, true, false); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(7, pager.getRecords().size()); |
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|
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// only misapplied names |
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// - Abies kawakamii sec. Komarov, V. L., Flora SSSR 29 |
| 171 | 276 |
setTaxaAndNamesModes(conf, false, false, false, true, false); |
| ... | ... | |
| 173 | 278 |
logSearchResults(pager, Level.DEBUG); |
| 174 | 279 |
assertEquals(1, pager.getRecords().size()); |
| 175 | 280 |
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// ========================================================= |
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|
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setTaxaAndNamesModes(conf, true, true, true, false, false); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(8, pager.getRecords().size()); |
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|
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// FIXME the Synonym Abies subalpina missing in result set |
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// setTaxaAndNamesModes(conf, false, true, true, false, false); |
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// pager = taxonService.findTaxaAndNames(conf); |
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// logSearchResults(pager, Level.DEBUG); |
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// assertEquals(1, pager.getRecords().size()); |
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|
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setTaxaAndNamesModes(conf, true, false, true, false, false); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(7, pager.getRecords().size()); |
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|
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setTaxaAndNamesModes(conf, false, false, true, false, false); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(0, pager.getRecords().size()); |
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|
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// --------------------------------------------------------- |
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|
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setTaxaAndNamesModes(conf, true, true, false, false, false); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(8, pager.getRecords().size()); |
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|
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setTaxaAndNamesModes(conf, false, true, false, false, false); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(1, pager.getRecords().size()); |
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|
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setTaxaAndNamesModes(conf, true, false, false, false, false); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(7, pager.getRecords().size()); |
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|
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setTaxaAndNamesModes(conf, false, false, false, false, false); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(0, pager.getRecords().size()); |
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} |
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|
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|
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/** |
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* Test method for |
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* {@link eu.etaxonomy.cdm.api.service.TaxonServiceImpl#findTaxaAndNames(eu.etaxonomy.cdm.api.service.config.IFindTaxaAndNamesConfigurator)}
|
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* . |
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*/ |
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/** |
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* This test permutes through all search mode combinations with classification filter |
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* |
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* 1 accepted taxon |
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* 1 Synonym |
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* 1 misapplied |
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* 2 names without taxa |
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* |
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*/ |
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@Test |
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@DataSet |
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public final void testFindTaxaAndNames_with_classification() {
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|
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IFindTaxaAndNamesConfigurator<?> conf = new FindTaxaAndNamesConfiguratorImpl(); |
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conf.setTitleSearchString("Abies*");
|
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conf.setClassification(classificationService.load(UUID.fromString(CLASSIFICATION_UUID))); |
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conf.setMatchMode(MatchMode.BEGINNING); |
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|
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// --------------------------------------------------------- |
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|
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setTaxaAndNamesModes(conf, true, true, true, true, true); |
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Pager<IdentifiableEntity> pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(5, pager.getRecords().size()); |
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|
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// FIXME the Synonym Abies subalpina missing in result set |
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// setTaxaAndNamesModes(conf, false, true, true, true, true); |
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// pager = taxonService.findTaxaAndNames(conf); |
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// logSearchResults(pager, Level.DEBUG); |
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// assertEquals(4, pager.getRecords().size()); |
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|
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setTaxaAndNamesModes(conf, true, false, true, true, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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assertEquals(4, pager.getRecords().size()); |
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|
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setTaxaAndNamesModes(conf, false, false, true, true, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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//logSearchResults(pager, Level.DEBUG); |
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assertEquals(3, pager.getRecords().size()); |
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|
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// --------------------------------------------------------- |
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|
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setTaxaAndNamesModes(conf, true, true, false, true, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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assertEquals(5, pager.getRecords().size()); |
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|
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|
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// FIXME org.hibernate.QueryParameterException: could not locate named parameter [taxa] |
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// setTaxaAndNamesModes(conf, false, true, false, true, true); |
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// pager = taxonService.findTaxaAndNames(conf); |
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// assertEquals(4, pager.getRecords().size()); |
|
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|
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setTaxaAndNamesModes(conf, true, false, false, true, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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assertEquals(4, pager.getRecords().size()); |
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|
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setTaxaAndNamesModes(conf, false, false, false, true, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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assertEquals(3, pager.getRecords().size()); |
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|
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// ========================================================= |
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|
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setTaxaAndNamesModes(conf, true, true, true, false, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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// logSearchResults(pager, Level.DEBUG); |
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assertEquals(4, pager.getRecords().size()); |
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|
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// FIXME the Synonym Abies subalpina missing in result set |
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// setTaxaAndNamesModes(conf, false, true, true, false, true); |
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// pager = taxonService.findTaxaAndNames(conf); |
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// logSearchResults(pager, Level.DEBUG); |
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// assertEquals(3, pager.getRecords().size()); |
|
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|
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setTaxaAndNamesModes(conf, true, false, true, false, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(3, pager.getRecords().size()); |
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|
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setTaxaAndNamesModes(conf, false, false, true, false, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(2, pager.getRecords().size()); |
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|
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// --------------------------------------------------------- |
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|
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setTaxaAndNamesModes(conf, true, true, false, false, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(4, pager.getRecords().size()); |
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|
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setTaxaAndNamesModes(conf, false, true, false, false, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
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assertEquals(3, pager.getRecords().size()); |
|
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|
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setTaxaAndNamesModes(conf, true, false, false, false, true); |
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pager = taxonService.findTaxaAndNames(conf); |
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logSearchResults(pager, Level.DEBUG); |
|
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assertEquals(3, pager.getRecords().size()); |
|
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|
|
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// only names without taxa |
| 177 | 434 |
// - Abies borisii-regis |
| 178 | 435 |
// - Abies lasio |
| ... | ... | |
| 181 | 438 |
logSearchResults(pager, Level.DEBUG); |
| 182 | 439 |
assertEquals(2, pager.getRecords().size()); |
| 183 | 440 |
|
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setTaxaAndNamesModes(conf, true, true, true, false, true); |
|
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// ========================================================= |
|
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|
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setTaxaAndNamesModes(conf, true, true, true, true, false); |
|
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pager = taxonService.findTaxaAndNames(conf); |
| 186 | 445 |
logSearchResults(pager, Level.DEBUG); |
| 187 |
assertEquals(10, pager.getRecords().size());
|
|
| 446 |
assertEquals(3, pager.getRecords().size());
|
|
| 188 | 447 |
|
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// FIXME the Synonym Abies subalpina missing in result set |
|
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// setTaxaAndNamesModes(conf, false, true, true, true, false); |
|
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// pager = taxonService.findTaxaAndNames(conf); |
|
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// logSearchResults(pager, Level.DEBUG); |
|
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// assertEquals(2, pager.getRecords().size()); |
|
| 189 | 453 |
|
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// FIXME permutate for all combinations, extra test each, with pager function. |
|
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// if enabled: |
|
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// t: taxa |
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// s: synonym |
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// c: common |
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// w: NamesWithoutTaxa |
|
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// m: setDoMisappliedNames |
|
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// otherwise _ |
|
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} |
|
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setTaxaAndNamesModes(conf, true, false, true, true, false); |
|
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pager = taxonService.findTaxaAndNames(conf); |
|
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logSearchResults(pager, Level.DEBUG); |
|
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assertEquals(2, pager.getRecords().size()); |
|
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|
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setTaxaAndNamesModes(conf, false, false, true, true, false); |
|
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pager = taxonService.findTaxaAndNames(conf); |
|
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logSearchResults(pager, Level.DEBUG); |
|
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assertEquals(1, pager.getRecords().size()); |
|
| 463 |
|
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// --------------------------------------------------------- |
|
| 465 |
|
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setTaxaAndNamesModes(conf, true, true, false, true, false); |
|
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pager = taxonService.findTaxaAndNames(conf); |
|
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logSearchResults(pager, Level.DEBUG); |
|
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assertEquals(3, pager.getRecords().size()); |
|
| 470 |
|
|
| 471 |
// FIXME org.hibernate.QueryParameterException: could not locate named parameter [taxa] |
|
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// setTaxaAndNamesModes(conf, false, true, false, true, false); |
|
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// pager = taxonService.findTaxaAndNames(conf); |
|
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// logSearchResults(pager, Level.DEBUG); |
|
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// assertEquals(2, pager.getRecords().size()); |
|
| 476 |
|
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| 477 |
setTaxaAndNamesModes(conf, true, false, false, true, false); |
|
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pager = taxonService.findTaxaAndNames(conf); |
|
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logSearchResults(pager, Level.DEBUG); |
|
| 480 |
assertEquals(2, pager.getRecords().size()); |
|
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|
|
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// only misapplied names |
|
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// - Abies kawakamii sec. Komarov, V. L., Flora SSSR 29 |
|
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setTaxaAndNamesModes(conf, false, false, false, true, false); |
|
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pager = taxonService.findTaxaAndNames(conf); |
|
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logSearchResults(pager, Level.DEBUG); |
|
| 487 |
assertEquals(1, pager.getRecords().size()); |
|
| 488 |
|
|
| 489 |
// ========================================================= |
|
| 490 |
|
|
| 491 |
setTaxaAndNamesModes(conf, true, true, true, false, false); |
|
| 492 |
pager = taxonService.findTaxaAndNames(conf); |
|
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logSearchResults(pager, Level.DEBUG); |
|
| 494 |
assertEquals(2, pager.getRecords().size()); |
|
| 495 |
|
|
| 496 |
// FIXME the Synonym Abies subalpina missing in result set |
|
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// setTaxaAndNamesModes(conf, false, true, true, false, false); |
|
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// pager = taxonService.findTaxaAndNames(conf); |
|
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// logSearchResults(pager, Level.DEBUG); |
|
| 500 |
// assertEquals(1, pager.getRecords().size()); |
|
| 501 |
|
|
| 502 |
setTaxaAndNamesModes(conf, true, false, true, false, false); |
|
| 503 |
pager = taxonService.findTaxaAndNames(conf); |
|
| 504 |
logSearchResults(pager, Level.DEBUG); |
|
| 505 |
assertEquals(1, pager.getRecords().size()); |
|
| 506 |
|
|
| 507 |
setTaxaAndNamesModes(conf, false, false, true, false, false); |
|
| 508 |
pager = taxonService.findTaxaAndNames(conf); |
|
| 509 |
logSearchResults(pager, Level.DEBUG); |
|
| 510 |
assertEquals(0, pager.getRecords().size()); |
|
| 511 |
|
|
| 512 |
// --------------------------------------------------------- |
|
| 513 |
|
|
| 514 |
setTaxaAndNamesModes(conf, true, true, false, false, false); |
|
| 515 |
pager = taxonService.findTaxaAndNames(conf); |
|
| 516 |
logSearchResults(pager, Level.DEBUG); |
|
| 517 |
assertEquals(2, pager.getRecords().size()); |
|
| 199 | 518 |
|
| 519 |
setTaxaAndNamesModes(conf, false, true, false, false, false); |
|
| 520 |
pager = taxonService.findTaxaAndNames(conf); |
|
| 521 |
logSearchResults(pager, Level.DEBUG); |
|
| 522 |
assertEquals(1, pager.getRecords().size()); |
|
| 523 |
|
|
| 524 |
setTaxaAndNamesModes(conf, true, false, false, false, false); |
|
| 525 |
pager = taxonService.findTaxaAndNames(conf); |
|
| 526 |
logSearchResults(pager, Level.DEBUG); |
|
| 527 |
assertEquals(1, pager.getRecords().size()); |
|
| 528 |
|
|
| 529 |
setTaxaAndNamesModes(conf, false, false, false, false, false); |
|
| 530 |
pager = taxonService.findTaxaAndNames(conf); |
|
| 531 |
logSearchResults(pager, Level.DEBUG); |
|
| 532 |
assertEquals(0, pager.getRecords().size()); |
|
| 533 |
} |
|
| 200 | 534 |
|
| 201 | 535 |
/** |
| 202 | 536 |
* Test method for |
| ... | ... | |
| 391 | 725 |
t_abies_kawakamii.getTitleCache(); |
| 392 | 726 |
taxonService.save(t_abies_kawakamii); |
| 393 | 727 |
|
| 394 |
|
|
| 728 |
// |
|
| 729 |
// 1 Misapplied Name |
|
| 730 |
// |
|
| 395 | 731 |
// abies_kawakamii_sensu_komarov as missapplied name for t_abies_balsamea |
| 396 | 732 |
Taxon t_abies_kawakamii_sensu_komarov = Taxon.NewInstance(n_abies_kawakamii, sec_sensu); |
| 397 | 733 |
taxonService.save(t_abies_kawakamii_sensu_komarov); |
| ... | ... | |
| 403 | 739 |
Taxon t_abies_lasiocarpa = Taxon.NewInstance(n_abies_lasiocarpa, sec); |
| 404 | 740 |
taxonService.save(t_abies_lasiocarpa); |
| 405 | 741 |
|
| 406 |
// add taxa to classifications |
|
| 742 |
// add 3 taxa to classifications
|
|
| 407 | 743 |
europeanAbiesClassification.addChildTaxon(t_abies_balsamea, null, null); |
| 408 | 744 |
alternativeClassification.addChildTaxon(t_abies_lasiocarpa, null, null); |
| 409 | 745 |
classificationService.saveOrUpdate(europeanAbiesClassification); |
| 410 | 746 |
classificationService.saveOrUpdate(alternativeClassification); |
| 411 | 747 |
|
| 412 | 748 |
// |
| 413 |
// Names without taxa |
|
| 749 |
// 2 Names without taxa
|
|
| 414 | 750 |
// |
| 415 | 751 |
BotanicalName n_abies_borisiiregis = BotanicalName.NewInstance(Rank.SPECIES()); |
| 416 | 752 |
n_abies_borisiiregis.setNameCache("Abies borisii-regis", true);
|
Also available in: Unified diff
ref #6296 more tests for findByTaxaAndName