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Revision bd45d1fc

Added by Patrick Plitzner about 6 years ago

Remove unused occurrence service method

View differences:

cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/OccurrenceServiceTest.java
33 33
import eu.etaxonomy.cdm.model.agent.Person;
34 34
import eu.etaxonomy.cdm.model.common.CdmBase;
35 35
import eu.etaxonomy.cdm.model.common.DefinedTerm;
36
import eu.etaxonomy.cdm.model.common.IdentifiableSource;
37 36
import eu.etaxonomy.cdm.model.common.Identifier;
38
import eu.etaxonomy.cdm.model.common.Language;
39 37
import eu.etaxonomy.cdm.model.common.TimePeriod;
40 38
import eu.etaxonomy.cdm.model.description.DescriptionElementBase;
41 39
import eu.etaxonomy.cdm.model.description.Feature;
42 40
import eu.etaxonomy.cdm.model.description.IndividualsAssociation;
43 41
import eu.etaxonomy.cdm.model.description.SpecimenDescription;
44 42
import eu.etaxonomy.cdm.model.description.TaxonDescription;
45
import eu.etaxonomy.cdm.model.location.Country;
46
import eu.etaxonomy.cdm.model.location.NamedArea;
47
import eu.etaxonomy.cdm.model.location.Point;
48
import eu.etaxonomy.cdm.model.location.ReferenceSystem;
49 43
import eu.etaxonomy.cdm.model.molecular.DnaSample;
50 44
import eu.etaxonomy.cdm.model.molecular.Sequence;
51 45
import eu.etaxonomy.cdm.model.name.IBotanicalName;
......
54 48
import eu.etaxonomy.cdm.model.name.TaxonName;
55 49
import eu.etaxonomy.cdm.model.name.TaxonNameFactory;
56 50
import eu.etaxonomy.cdm.model.name.TypeDesignationBase;
57
import eu.etaxonomy.cdm.model.occurrence.Collection;
58 51
import eu.etaxonomy.cdm.model.occurrence.DerivationEvent;
59 52
import eu.etaxonomy.cdm.model.occurrence.DerivationEventType;
60 53
import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
61 54
import eu.etaxonomy.cdm.model.occurrence.DeterminationEvent;
62 55
import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
63
import eu.etaxonomy.cdm.model.occurrence.GatheringEvent;
64
import eu.etaxonomy.cdm.model.occurrence.MediaSpecimen;
65
import eu.etaxonomy.cdm.model.occurrence.PreservationMethod;
66 56
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
67 57
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationType;
68 58
import eu.etaxonomy.cdm.model.reference.Reference;
......
103 93
    @SpringBeanByType
104 94
    private IDescriptionService descriptionService;
105 95

  
106
    @Test
107
    public void testGetNonCascadedAssociatedElements() {
108
        // Collection
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        Collection collection = Collection.NewInstance();
110
        Collection subCollection = Collection.NewInstance();
111
        subCollection.setSuperCollection(collection);
112

  
113
        Institution institution = Institution.NewInstance();
114
        institution
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                .addType(DefinedTerm.NewInstitutionTypeInstance("Research and teaching", "botanical garden", "BGBM"));
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        collection.setInstitute(institution);
117

  
118
        // Source
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        Reference article = ReferenceFactory.newArticle(getReference(), Person.NewInstance(), "title", "pages",
120
                "series", "volume", TimePeriod.NewInstance(2014));
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        IdentifiableSource source = IdentifiableSource.NewPrimarySourceInstance(article, "microCitation");
122

  
123
        // FieldUnit
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        FieldUnit fieldUnit = FieldUnit.NewInstance();
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        Person primaryCollector = Person.NewInstance();
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        primaryCollector.setLifespan(TimePeriod.NewInstance(2014));
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        fieldUnit.setPrimaryCollector(primaryCollector);
128
        fieldUnit.addSource(source);
129

  
130
        // GatheringEvent
131
        GatheringEvent gatheringEvent = GatheringEvent.NewInstance();
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        fieldUnit.setGatheringEvent(gatheringEvent);
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        gatheringEvent.putLocality(Language.ENGLISH(), "locality");
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        gatheringEvent.setExactLocation(Point.NewInstance(22.4, -34.2,
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                ReferenceSystem.NewInstance("MyReferenceSystem", "label", "labelAbbrev"), 33));
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        gatheringEvent.setCountry(Country.GERMANY());
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        gatheringEvent.addCollectingArea(NamedArea.EUROPE());
138

  
139
        // Derived Unit
140
        MediaSpecimen mediaSpecimen = MediaSpecimen.NewInstance(SpecimenOrObservationType.StillImage);
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        mediaSpecimen.setCollection(collection);
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        TaxonName storedUnder = TaxonNameFactory.NewBotanicalInstance(Rank.SPECIES());
143
        mediaSpecimen.setStoredUnder(storedUnder);
144
        PreservationMethod preservation = PreservationMethod.NewInstance(null, "My preservation");
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        preservation.setMedium(DefinedTerm.NewDnaMarkerInstance("medium", "medium", "medium"));// dummy
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                                                                                               // defined
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                                                                                               // term
148
        mediaSpecimen.setPreservation(preservation);
149

  
150
        // DerivationEvent
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        DerivationEvent event = DerivationEvent.NewInstance(DerivationEventType.ACCESSIONING());
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        event.addOriginal(fieldUnit);
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        event.addDerivative(mediaSpecimen);
154

  
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        // SpecOrObservationBase
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        fieldUnit.setSex(DefinedTerm.SEX_FEMALE());
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        fieldUnit.setLifeStage(DefinedTerm.NewStageInstance("Live stage", "stage", null));
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        fieldUnit.setKindOfUnit(DefinedTerm.NewKindOfUnitInstance("Kind of unit", "Kind of unit", null));
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        fieldUnit.putDefinition(Language.ENGLISH(), "definition");
160

  
161
        // Determination
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        DeterminationEvent determinationEvent = DeterminationEvent.NewInstance(getTaxon(), mediaSpecimen);
163
        determinationEvent.setModifier(DefinedTerm.NewModifierInstance("modifierDescription", "modifierLabel",
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                "mofifierLabelAbbrev"));
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        determinationEvent.setPreferredFlag(true);
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        Reference reference = getReference();
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        determinationEvent.addReference(reference);
168

  
169
        /*
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         * NonCascaded SOOB - sex (FEMALE) - stage (Live stage) - kindOfUnit
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         * (Kind of unit) GatheringEvent - country (GERMANY) - collectingArea
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         * (EUROPE) DerivedUnit - storedUnder (botanical name) DerivedUnit->
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         * Collection -> institiute - type (botanical garden)
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         */
175

  
176
        assertEquals("Incorrect number of non cascaded CDM entities", 9, occurrenceService
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                .getNonCascadedAssociatedElements(fieldUnit).size());
178
        assertEquals("Incorrect number of non cascaded CDM entities", 9, occurrenceService
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                .getNonCascadedAssociatedElements(mediaSpecimen).size());
180

  
181
    }
182

  
183 96
    private Reference getReference() {
184 97
        Reference result = ReferenceFactory.newGeneric();
185 98
        result.setTitle("some generic reference");

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