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/**
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* Copyright (C) 2007 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.cdm.ext.geo;
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import static org.junit.Assert.assertTrue;
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import java.awt.Color;
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import java.io.FileNotFoundException;
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import java.io.IOException;
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import java.io.InputStream;
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import java.io.InputStreamReader;
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import java.net.HttpURLConnection;
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import java.net.MalformedURLException;
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import java.net.URI;
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import java.net.URL;
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import java.util.ArrayList;
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import java.util.Collection;
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import java.util.HashMap;
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import java.util.HashSet;
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import java.util.List;
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import java.util.Map;
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import java.util.Set;
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import java.util.UUID;
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import org.apache.commons.lang.StringUtils;
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import org.apache.http.client.ClientProtocolException;
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import org.apache.log4j.Logger;
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import org.junit.Assert;
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import org.junit.Before;
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import org.junit.Test;
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import org.unitils.dbunit.annotation.DataSet;
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import org.unitils.spring.annotation.SpringBeanByType;
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import eu.etaxonomy.cdm.api.service.ITaxonService;
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import eu.etaxonomy.cdm.api.service.ITermService;
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import eu.etaxonomy.cdm.api.service.IVocabularyService;
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import eu.etaxonomy.cdm.api.utility.DescriptionUtility;
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import eu.etaxonomy.cdm.common.StreamUtils;
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import eu.etaxonomy.cdm.common.UriUtils;
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import eu.etaxonomy.cdm.model.common.CdmBase;
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import eu.etaxonomy.cdm.model.common.Language;
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import eu.etaxonomy.cdm.model.common.MarkerType;
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import eu.etaxonomy.cdm.model.description.DescriptionElementBase;
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import eu.etaxonomy.cdm.model.description.Distribution;
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import eu.etaxonomy.cdm.model.description.Feature;
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import eu.etaxonomy.cdm.model.description.PresenceAbsenceTerm;
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import eu.etaxonomy.cdm.model.description.TaxonDescription;
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import eu.etaxonomy.cdm.model.location.Country;
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import eu.etaxonomy.cdm.model.location.NamedArea;
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import eu.etaxonomy.cdm.model.location.NamedAreaLevel;
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import eu.etaxonomy.cdm.model.location.NamedAreaType;
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import eu.etaxonomy.cdm.model.taxon.Taxon;
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import eu.etaxonomy.cdm.model.term.DefinedTermBase;
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import eu.etaxonomy.cdm.model.term.TermType;
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import eu.etaxonomy.cdm.model.term.TermVocabulary;
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import eu.etaxonomy.cdm.test.integration.CdmTransactionalIntegrationTest;
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/**
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* @author a.mueller
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* @since 08.10.2008
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*/
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public class EditGeoServiceTest extends CdmTransactionalIntegrationTest {
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private static final Logger logger = Logger.getLogger(EditGeoServiceTest.class);
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private static final String EDIT_MAPSERVICE_URI_STING = "http://edit.africamuseum.be/edit_wp5/v1.2/rest_gen.php";
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private static URI editMapServiceUri;
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@SpringBeanByType
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private ITermService termService;
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@SpringBeanByType
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private IVocabularyService vocabService;
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@SpringBeanByType
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private GeoServiceAreaAnnotatedMapping mapping;
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@SpringBeanByType
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private IEditGeoService editGeoService;
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@SpringBeanByType
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private ITaxonService taxonService ;
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@Before
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public void setUp() throws Exception {
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System.setProperty("ONLY-A-TEST", "TRUE"); // allows EditGeoServiceUtilities to skip some line of code
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editMapServiceUri = new URI(EDIT_MAPSERVICE_URI_STING);
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}
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//******************************************** TESTS**************
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@Test
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public void testGetWebServiceUrlCountry() {
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Set<Distribution> distributions = new HashSet<>();
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Country germany = termService.findByIdInVocabulary("DEU", Country.uuidCountryVocabulary, Country.class);
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distributions.add(Distribution.NewInstance(germany, PresenceAbsenceTerm.PRESENT()));
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distributions.add(Distribution.NewInstance(termService.findByIdInVocabulary("DE", Country.uuidCountryVocabulary, Country.class), PresenceAbsenceTerm.INTRODUCED()));
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Map<PresenceAbsenceTerm, Color> presenceAbsenceColorMap = new HashMap<>();
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presenceAbsenceColorMap.put(PresenceAbsenceTerm.PRESENT(), Color.BLUE);
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presenceAbsenceColorMap.put(PresenceAbsenceTerm.INTRODUCED(), Color.BLACK);
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List<Language> languages = new ArrayList<>();
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boolean subAreaPreference = false;
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boolean statusOrderPreference = false;
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Collection<Distribution> filteredDistributions = DescriptionUtility.filterDistributions(
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distributions, null, true, statusOrderPreference, subAreaPreference);
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String result = EditGeoServiceUtilities.getDistributionServiceRequestParameterString(filteredDistributions,
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mapping, null, null, languages );
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logger.warn(result);
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Assert.assertTrue("WebServiceUrl must contain country part for Germany", result.matches(".*ad=country_earth(%3A|:)gmi_cntry:.:DEU.*"));
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}
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@Test
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public void testGetWebServiceUrlTdwg() throws MalformedURLException, IOException {
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//String webServiceUrl = "http://www.test.de/webservice";
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Set<Distribution> distributions = new HashSet<>();
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distributions.add(Distribution.NewInstance(termService.getAreaByTdwgAbbreviation("SPA"), PresenceAbsenceTerm.PRESENT()));
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distributions.add(Distribution.NewInstance(termService.getAreaByTdwgAbbreviation("GER"), PresenceAbsenceTerm.INTRODUCED()));
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distributions.add(Distribution.NewInstance(termService.getAreaByTdwgAbbreviation("14"), PresenceAbsenceTerm.CULTIVATED()));
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distributions.add(Distribution.NewInstance(termService.getAreaByTdwgAbbreviation("BGM"), PresenceAbsenceTerm.ABSENT()));
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distributions.add(Distribution.NewInstance(termService.getAreaByTdwgAbbreviation("FRA"), PresenceAbsenceTerm.ABSENT()));
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distributions.add(Distribution.NewInstance(termService.getAreaByTdwgAbbreviation("IND-AP"), PresenceAbsenceTerm.PRESENT()));
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Map<PresenceAbsenceTerm, Color> presenceAbsenceColorMap = new HashMap<>();
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presenceAbsenceColorMap.put(PresenceAbsenceTerm.PRESENT(), Color.BLUE);
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presenceAbsenceColorMap.put(PresenceAbsenceTerm.INTRODUCED(), Color.BLACK);
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presenceAbsenceColorMap.put(PresenceAbsenceTerm.CULTIVATED(), Color.YELLOW);
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presenceAbsenceColorMap.put(PresenceAbsenceTerm.ABSENT(), Color.DARK_GRAY);
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// String backLayer ="";
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presenceAbsenceColorMap = null;
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// String bbox="-20,0,120,70";
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List<Language> languages = new ArrayList<>();
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// boolean subAreaPreference = false;
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// boolean statusOrderPreference = false;
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String result = EditGeoServiceUtilities.getDistributionServiceRequestParameterString(
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distributions,
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mapping,
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null, // presenceAbsenceTermColors
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null, // projectToLayer
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languages );
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//TODO Set semantics is not determined
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//String expected = "http://www.test.de/webservice?l=tdwg3&ad=tdwg3:a:GER|b:OKL|c:BGM|b:SPA|d:FRA&as=a:005500|b:00FF00|c:FFFFFF|d:001100&bbox=-20,40,40,40&ms=400x300";
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logger.debug(result);
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assertTrue(result.matches(".*ad=tdwg[1-4].*"));
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assertTrue(result.matches(".*tdwg2:[a-d]:14[\\|&].*") );
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assertTrue(result.matches(".*[a-d]:FRA,BGM[\\|&].*") || result.matches(".*[a-d]:BGM,FRA[\\|&].*") );
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assertTrue(result.matches(".*[a-d]:GER[\\|&].*") );
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assertTrue(result.matches(".*[a-d]:SPA[\\|&].*") );
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assertTrue(result.matches(".*tdwg4:[a-d]:INDAP[\\|&].*") );
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//assertTrue(result.matches("0000ff"));
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//TODO continue
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// request map image from webservice
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subTestWithEditMapService(result);
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}
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@Test
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public void testGetWebServiceUrlCyprus() throws ClientProtocolException, IOException {
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makeCyprusAreas();
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Set<Distribution> distributions = new HashSet<Distribution>();
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distributions.add(Distribution.NewInstance(divisions.get("1"), PresenceAbsenceTerm.PRESENT()));
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distributions.add(Distribution.NewInstance(divisions.get("2"), PresenceAbsenceTerm.INTRODUCED()));
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distributions.add(Distribution.NewInstance(divisions.get("3"), PresenceAbsenceTerm.CULTIVATED()));
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distributions.add(Distribution.NewInstance(divisions.get("4"), PresenceAbsenceTerm.ABSENT()));
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distributions.add(Distribution.NewInstance(divisions.get("5"), PresenceAbsenceTerm.ABSENT()));
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distributions.add(Distribution.NewInstance(divisions.get("6"), PresenceAbsenceTerm.PRESENT()));
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Map<PresenceAbsenceTerm, Color> presenceAbsenceColorMap = new HashMap<>();
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presenceAbsenceColorMap.put(PresenceAbsenceTerm.PRESENT(), Color.BLUE);
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presenceAbsenceColorMap.put(PresenceAbsenceTerm.INTRODUCED(), Color.BLACK);
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presenceAbsenceColorMap.put(PresenceAbsenceTerm.CULTIVATED(), Color.YELLOW);
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presenceAbsenceColorMap.put(PresenceAbsenceTerm.ABSENT(), Color.DARK_GRAY);
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presenceAbsenceColorMap = null;
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List<Language> languages = new ArrayList<>();
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String result = EditGeoServiceUtilities.getDistributionServiceRequestParameterString(
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distributions,
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mapping,
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null, null, languages );
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//TODO Set semantics is not determined
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//String expected = "http://www.test.de/webservice?l=tdwg3&ad=tdwg3:a:GER|b:OKL|c:BGM|b:SPA|d:FRA&as=a:005500|b:00FF00|c:FFFFFF|d:001100&bbox=-20,40,40,40&ms=400x300";
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assertTrue(result.matches(".*ad=cyprusdivs%3Abdcode:.*"));
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assertTrue(result.matches(".*[a-d]:5,4[\\|&].*") || result.matches(".*[a-d]:4,5[\\|&].*") );
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assertTrue(result.matches(".*[a-d]:1,6[\\|&].*") || result.matches(".*[a-d]:6,1[\\|&].*") );
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assertTrue(result.matches(".*[a-d]:2[\\|&].*") );
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assertTrue(result.matches(".*[a-d]:3[\\|&].*") );
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// request map image from webservice
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subTestWithEditMapService(result);
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}
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private void subTestWithEditMapService(String queryString)throws MalformedURLException, IOException {
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if(UriUtils.isServiceAvailable(editMapServiceUri)){
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URL requestUrl = new URL(editMapServiceUri.toString() + "?img=false&bbox=-180,-90,180,90&ms=1000&" + queryString);
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logger.debug("editMapServiceUri: " + requestUrl);
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HttpURLConnection connection = (HttpURLConnection) requestUrl.openConnection();
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connection.connect();
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// connection.setReadTimeout(10000); //timeout after 10 sec, does not seem to work
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assertTrue(connection.getResponseCode() == 200);
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InputStream contentStream = connection.getInputStream();
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String content = StreamUtils.readToString(contentStream);
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logger.debug("EditMapService response body:\n" + content);
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assertTrue(content.startsWith("[{"));
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assertTrue(content.endsWith("}]"));
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assertTrue(content.matches(".*\"bbox\":.*"));
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assertTrue(content.matches(".*\"legend\":.*"));
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assertTrue(content.matches(".*\"layers\":.*"));
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assertTrue(content.matches(".*\"sld\":.*"));
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assertTrue(content.matches(".*\"geoserver\":.*"));
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}
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}
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public static final UUID uuidCyprusDivisionsVocabulary = UUID.fromString("2119f610-1f93-4d87-af28-40aeefaca100");
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private final Map<String, NamedArea> divisions = new HashMap<String, NamedArea>();
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private boolean makeCyprusAreas() throws IOException {
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//divisions
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NamedAreaType areaType = NamedAreaType.NATURAL_AREA();
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NamedAreaLevel areaLevel = NamedAreaLevel.NewInstance("Cyprus Division", "Cyprus Division", null);
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termService.saveOrUpdate(areaLevel);
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TermVocabulary<NamedArea> areaVocabulary = TermVocabulary.NewInstance(TermType.NamedArea,
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NamedArea.class, "Cyprus devisions", "Cyprus divisions", null, null);
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areaVocabulary.setUuid(uuidCyprusDivisionsVocabulary);
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for(int i = 1; i <= 8; i++){
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UUID divisionUuid = getNamedAreaUuid(String.valueOf(i));
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NamedArea division = this.newNamedArea(
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divisionUuid,
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"Division " + i,
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"Cyprus: Division " + i,
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String.valueOf(i), // id in vocab
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areaType,
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areaLevel,
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areaVocabulary);
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divisions.put(String.valueOf(i), division);
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}
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vocabService.saveOrUpdate(areaVocabulary);
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commitAndStartNewTransaction(null);
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// import and map shapefile attributes from csv
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InputStream is = getClass().getClassLoader().getResourceAsStream("eu/etaxonomy/cdm/ext/geo/cyprusdivs.csv");
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List<String> idSearchFields = new ArrayList<String>();
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idSearchFields.add("bdcode");
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String wmsLayerName = "cyprusdivs";
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editGeoService.mapShapeFileToNamedAreas(new InputStreamReader(is), idSearchFields, wmsLayerName, uuidCyprusDivisionsVocabulary, null);
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divisions.clear();
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Set<DefinedTermBase> terms = vocabService.load(uuidCyprusDivisionsVocabulary).getTerms();
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for(DefinedTermBase<?> dtb : terms){
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divisions.put(dtb.getIdInVocabulary(), (NamedArea) dtb);
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}
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// indigenousStatus = (PresenceTerm)getTermService().find(CyprusTransformer.indigenousUuid);
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// casualStatus = (PresenceTerm)getTermService().find(CyprusTransformer.casualUuid);
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// nonInvasiveStatus = (PresenceTerm)getTermService().find(CyprusTransformer.nonInvasiveUuid);
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// invasiveStatus = (PresenceTerm)getTermService().find(CyprusTransformer.invasiveUuid);
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// questionableStatus = (PresenceTerm)getTermService().find(CyprusTransformer.questionableUuid);
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return true;
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}
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public static final UUID uuidDivision1 = UUID.fromString("ab17eee9-1abb-4ce9-a9a2-563f840cdbfc");
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public static final UUID uuidDivision2 = UUID.fromString("c3606165-efb7-4224-a168-63e009eb4aa5");
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public static final UUID uuidDivision3 = UUID.fromString("750d4e07-e34b-491f-a7b7-09723afdc960");
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public static final UUID uuidDivision4 = UUID.fromString("8a858922-e8e5-4791-ad53-906e50633ec7");
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public static final UUID uuidDivision5 = UUID.fromString("16057133-d541-4ebd-81d4-cb92265ec54c");
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public static final UUID uuidDivision6 = UUID.fromString("fbf21230-4a42-4f4c-9af8-5da52123c264");
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public static final UUID uuidDivision7 = UUID.fromString("d31dd96a-36ea-4428-871c-d8552a9565ca");
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public static final UUID uuidDivision8 = UUID.fromString("236ea447-c3ab-486d-9e06-cc5907861acc");
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public UUID getNamedAreaUuid(String key) {
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if (StringUtils.isBlank(key)){return null;
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}else if (key.equalsIgnoreCase("1")){return uuidDivision1;
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}else if (key.equalsIgnoreCase("2")){return uuidDivision2;
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}else if (key.equalsIgnoreCase("3")){return uuidDivision3;
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}else if (key.equalsIgnoreCase("4")){return uuidDivision4;
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}else if (key.equalsIgnoreCase("5")){return uuidDivision5;
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}else if (key.equalsIgnoreCase("6")){return uuidDivision6;
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}else if (key.equalsIgnoreCase("7")){return uuidDivision7;
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}else if (key.equalsIgnoreCase("8")){return uuidDivision8;
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299
|
}else{
|
|
300
|
return null;
|
|
301
|
}
|
|
302
|
}
|
|
303
|
|
|
304
|
protected NamedArea newNamedArea(UUID uuid, String label, String text, String IdInVocabulary, NamedAreaType areaType, NamedAreaLevel level, TermVocabulary<NamedArea> voc){
|
|
305
|
NamedArea namedArea = NamedArea.NewInstance(text, label, null);
|
|
306
|
voc.addTerm(namedArea);
|
|
307
|
namedArea.setType(areaType);
|
|
308
|
namedArea.setLevel(level);
|
|
309
|
namedArea.setUuid(uuid);
|
|
310
|
namedArea.setIdInVocabulary(IdInVocabulary);
|
|
311
|
return namedArea;
|
|
312
|
}
|
|
313
|
|
|
314
|
@Test
|
|
315
|
public void testGetWebServiceUrlBangka() throws ClientProtocolException, IOException {
|
|
316
|
NamedArea areaBangka = NamedArea.NewInstance("Bangka", "Bangka", null);
|
|
317
|
TermVocabulary<NamedArea> voc = TermVocabulary.NewInstance(TermType.NamedArea,
|
|
318
|
NamedArea.class, "test Voc", "test voc", null, null);
|
|
319
|
voc.addTerm(areaBangka);
|
|
320
|
|
|
321
|
GeoServiceArea geoServiceArea = new GeoServiceArea();
|
|
322
|
String geoServiceLayer="vmap0_as_bnd_political_boundary_a";
|
|
323
|
String layerFieldName ="nam";
|
|
324
|
String areaValue = "PULAU BANGKA#SUMATERA SELATAN";
|
|
325
|
geoServiceArea.add(geoServiceLayer, layerFieldName, areaValue);
|
|
326
|
geoServiceArea.add(geoServiceLayer, layerFieldName, "BALI");
|
|
327
|
|
|
328
|
mapping.set(areaBangka, geoServiceArea);
|
|
329
|
Set<Distribution> distributions = new HashSet<>();
|
|
330
|
distributions.add(Distribution.NewInstance(areaBangka, PresenceAbsenceTerm.PRESENT()));
|
|
331
|
|
|
332
|
Map<PresenceAbsenceTerm, Color> presenceAbsenceColorMap = new HashMap<>();
|
|
333
|
presenceAbsenceColorMap.put(PresenceAbsenceTerm.PRESENT(), Color.BLUE);
|
|
334
|
|
|
335
|
presenceAbsenceColorMap = null;
|
|
336
|
List<Language> languages = new ArrayList<>();
|
|
337
|
|
|
338
|
String result = EditGeoServiceUtilities.getDistributionServiceRequestParameterString(distributions,
|
|
339
|
mapping,
|
|
340
|
null, null, languages );
|
|
341
|
//TODO Set semantics is not determined
|
|
342
|
//String expected = "http://www.test.de/webservice?l=tdwg3&ad=tdwg3:a:GER|b:OKL|c:BGM|b:SPA|d:FRA&as=a:005500|b:00FF00|c:FFFFFF|d:001100&bbox=-20,40,40,40&ms=400x300";
|
|
343
|
|
|
344
|
logger.debug(result);
|
|
345
|
assertTrue(result.matches(".*ad=vmap0_as_bnd_political_boundary_a%3Anam:.*"));
|
|
346
|
assertTrue(result.matches(".*(PULAU\\+BANGKA%23SUMATERA\\+SELATAN).*") );
|
|
347
|
assertTrue(result.matches(".*(BALI).*") );
|
|
348
|
|
|
349
|
// request map image from webservice
|
|
350
|
subTestWithEditMapService(result);
|
|
351
|
}
|
|
352
|
|
|
353
|
@SuppressWarnings("deprecation")
|
|
354
|
// @Test
|
|
355
|
@DataSet( value="EditGeoServiceTest.getDistributionServiceRequestParameterString.xml")
|
|
356
|
// @DataSets({
|
|
357
|
// @DataSet(loadStrategy=CleanSweepInsertLoadStrategy.class, value="/eu/etaxonomy/cdm/database/ClearDB_with_Terms_DataSet.xml"),
|
|
358
|
// @DataSet("/eu/etaxonomy/cdm/database/TermsDataSet-with_auditing_info.xml"),
|
|
359
|
// @DataSet( value="EditGeoServiceTest.getDistributionServiceRequestParameterString.xml")
|
|
360
|
// })
|
|
361
|
public void getDistributionServiceRequestParameterString(){
|
|
362
|
boolean subAreaPreference = false;
|
|
363
|
boolean statusOrderPreference = false;
|
|
364
|
Set<MarkerType> hideMarkedAreas = null;
|
|
365
|
Map<PresenceAbsenceTerm, Color> presenceAbsenceTermColors = null;
|
|
366
|
List<Language> langs = null;
|
|
367
|
|
|
368
|
List<TaxonDescription> taxonDescriptions = new ArrayList<>();
|
|
369
|
TaxonDescription description1 = TaxonDescription.NewInstance();
|
|
370
|
taxonDescriptions.add(description1);
|
|
371
|
Distribution distribution1 = Distribution.NewInstance(Country.GERMANY(), null);
|
|
372
|
description1.addElement(distribution1);
|
|
373
|
Distribution distribution2 = Distribution.NewInstance(Country.FRANCEFRENCHREPUBLIC(), null);
|
|
374
|
distribution2.setFeature(Feature.COMMON_NAME());
|
|
375
|
description1.addElement(distribution2);
|
|
376
|
|
|
377
|
Taxon taxon = (Taxon)taxonService.find(UUID.fromString("7598f5d4-1cf2-4269-ae99-2adb79ae167c"));
|
|
378
|
TaxonDescription taxDesc = taxon.getDescriptions().iterator().next();
|
|
379
|
for (DescriptionElementBase deb : taxDesc.getElements()){
|
|
380
|
Distribution distribution = CdmBase.deproxy(deb, Distribution.class);
|
|
381
|
NamedArea area = distribution.getArea();
|
|
382
|
System.out.println(area.getTitleCache());
|
|
383
|
}
|
|
384
|
taxonDescriptions.addAll(taxon.getDescriptions());
|
|
385
|
|
|
386
|
String distributions = editGeoService.getDistributionServiceRequestParameterString(taxonDescriptions,
|
|
387
|
subAreaPreference, statusOrderPreference, hideMarkedAreas, presenceAbsenceTermColors, langs);
|
|
388
|
System.out.println(distributions);
|
|
389
|
Assert.assertTrue("Distribution string should contain the non-persited distribution Germany", distributions.contains("DEU"));
|
|
390
|
Assert.assertFalse("Distribution string should contain France as it has a non-distribution feature", distributions.contains("FRA"));
|
|
391
|
|
|
392
|
// CHE,POL
|
|
393
|
}
|
|
394
|
|
|
395
|
@Override
|
|
396
|
// @Test
|
|
397
|
public void createTestDataSet() throws FileNotFoundException {
|
|
398
|
|
|
399
|
List<TaxonDescription> taxonDescriptions = new ArrayList<>();
|
|
400
|
TaxonDescription description1 = TaxonDescription.NewInstance();
|
|
401
|
taxonDescriptions.add(description1);
|
|
402
|
Distribution distribution1 = Distribution.NewInstance(Country.POLANDPOLISHPEOPLESREPUBLIC(), null);
|
|
403
|
description1.addElement(distribution1);
|
|
404
|
Distribution distribution2 = Distribution.NewInstance(Country.SWITZERLANDSWISSCONFEDERATION(), null);
|
|
405
|
// distribution2.setFeature(Feature.COMMON_NAME());
|
|
406
|
description1.addElement(distribution2);
|
|
407
|
Taxon taxon = Taxon.NewInstance(null, null);
|
|
408
|
taxon.setTitleCache("Dummy taxon", true);
|
|
409
|
taxon.addDescription(description1);
|
|
410
|
taxon.setUuid(UUID.fromString("7598f5d4-1cf2-4269-ae99-2adb79ae167c"));
|
|
411
|
|
|
412
|
taxonService.save(taxon);
|
|
413
|
|
|
414
|
setComplete();
|
|
415
|
endTransaction();
|
|
416
|
|
|
417
|
writeDbUnitDataSetFile(new String[] {
|
|
418
|
"TAXONBASE",
|
|
419
|
"DESCRIPTIONBASE", "DESCRIPTIONELEMENTBASE",
|
|
420
|
"HIBERNATE_SEQUENCES" // IMPORTANT!!!
|
|
421
|
},
|
|
422
|
"getDistributionServiceRequestParameterString", true );
|
|
423
|
}
|
|
424
|
}
|