Revision 9dc896c9
Added by Andreas Müller almost 7 years ago
| cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/TaxonComparator.java | ||
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import eu.etaxonomy.cdm.model.name.NomenclaturalStatus; |
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import eu.etaxonomy.cdm.model.name.NomenclaturalStatusType; |
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import eu.etaxonomy.cdm.model.name.Rank; |
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import eu.etaxonomy.cdm.model.name.TaxonNameBase;
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import eu.etaxonomy.cdm.model.name.TaxonName; |
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import eu.etaxonomy.cdm.model.reference.Reference; |
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/** |
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* This class makes available a method to compare two {@link TaxonBase taxa} by
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* comparing the publication dates of the corresponding |
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* {@link eu.etaxonomy.cdm.model.name.TaxonNameBase taxon names}.
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* {@link eu.etaxonomy.cdm.model.name.TaxonName taxon names}.
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* |
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* @author a.mueller |
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* @created 11.06.2008 |
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/** |
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* Returns an integer generated by comparing first the nomenclatural status and then the |
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* {@link eu.etaxonomy.cdm.model.name.INomenclaturalReference#getYear() publication years}
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* of both {@link eu.etaxonomy.cdm.model.name.TaxonNameBase taxon names}
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* of both {@link eu.etaxonomy.cdm.model.name.TaxonName taxon names}
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* used in the given {@link TaxonBase taxa}.
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* If 1 name has status of type nom. inval. or nom. nudum the name is put to the end of a |
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* list (returns +1 for a status in taxon1 and -1 for a status in taxon2). If both do have |
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return 0; |
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} |
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TaxonNameBase<?,?> name1 = taxonBase1.getName();
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TaxonNameBase<?,?> name2 = taxonBase2.getName();
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TaxonName name1 = taxonBase1.getName(); |
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TaxonName name2 = taxonBase2.getName(); |
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//set to end if a taxon has nomenclatural status "nom. inval." or "nom. nud." |
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int statusCompareWeight = compareStatus(name1, name2); |
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/** |
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* @param taxonNameBase
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* @param taxonNameBase2
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* @param taxonName |
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* @param taxonName2 |
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* @param statusCompareWeight |
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* @return |
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*/ |
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protected int compareStatus(TaxonNameBase<?,?> taxonNameBase, TaxonNameBase<?,?> taxonNameBase2) {
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protected int compareStatus(TaxonName taxonName, TaxonName taxonName2) {
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int statusCompareWeight = 0; |
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statusCompareWeight += computeStatusCompareWeight(taxonNameBase);
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statusCompareWeight -= computeStatusCompareWeight(taxonNameBase2);
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statusCompareWeight += computeStatusCompareWeight(taxonName); |
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statusCompareWeight -= computeStatusCompareWeight(taxonName2); |
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return statusCompareWeight; |
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} |
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|
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* @param statusCompareWeight |
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* @return |
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*/ |
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private int computeStatusCompareWeight(TaxonNameBase<?,?> taxonNameBase) {
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private int computeStatusCompareWeight(TaxonName taxonName) {
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int result = 0; |
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if (taxonNameBase == null || taxonNameBase.getStatus() == null){
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if (taxonName == null || taxonName.getStatus() == null){
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return 0; |
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} |
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Set<NomenclaturalStatus> status1 = taxonNameBase.getStatus();
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Set<NomenclaturalStatus> status1 = taxonName.getStatus(); |
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for (NomenclaturalStatus nomStatus1 : status1){
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NomenclaturalStatusType type = nomStatus1.getType(); |
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if (type != null && type.isInvalidType()){
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return result; |
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} |
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protected int compareNomIlleg(TaxonNameBase<?,?> taxonNameBase1, TaxonNameBase<?,?> taxonNameBase2) {
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int isNomIlleg1 = isNomIlleg(taxonNameBase1);
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int isNomIlleg2 = isNomIlleg(taxonNameBase2);
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protected int compareNomIlleg(TaxonName taxonName1, TaxonName taxonName2) {
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int isNomIlleg1 = isNomIlleg(taxonName1); |
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int isNomIlleg2 = isNomIlleg(taxonName2); |
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return isNomIlleg1 - isNomIlleg2; |
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} |
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private int isNomIlleg(TaxonNameBase<?,?> taxonNameBase) {
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if (taxonNameBase == null || taxonNameBase.getStatus() == null){
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private int isNomIlleg(TaxonName taxonName) {
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if (taxonName == null || taxonName.getStatus() == null){
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return 0; |
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} |
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Set<NomenclaturalStatus> status = taxonNameBase.getStatus();
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Set<NomenclaturalStatus> status = taxonName.getStatus(); |
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for (NomenclaturalStatus nomStatus : status){
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if (nomStatus.getType() != null){
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if (nomStatus.getType().equals(NomenclaturalStatusType.ILLEGITIMATE())){
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} |
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private Integer getIntegerDate(TaxonNameBase<?,?> name){
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private Integer getIntegerDate(TaxonName name){
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Integer result; |
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if (name == null){
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* without status nom. illeg. |
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* @return |
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*/ |
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protected int compare(TaxonNameBase<?,?> name1, TaxonNameBase<?,?> name2, boolean includeNomIlleg) {
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protected int compare(TaxonName name1, TaxonName name2, boolean includeNomIlleg) {
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int result; |
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//dates |
Also available in: Unified diff
fix #6368 rename table and class TaxonNameBase