1
|
/**
|
2
|
* Copyright (C) 2009 EDIT
|
3
|
* European Distributed Institute of Taxonomy
|
4
|
* http://www.e-taxonomy.eu
|
5
|
*
|
6
|
* The contents of this file are subject to the Mozilla Public License Version 1.1
|
7
|
* See LICENSE.TXT at the top of this package for the full license terms.
|
8
|
*/
|
9
|
|
10
|
package eu.etaxonomy.cdm.api.service;
|
11
|
|
12
|
import static org.junit.Assert.assertEquals;
|
13
|
import static org.junit.Assert.assertNull;
|
14
|
|
15
|
import java.util.UUID;
|
16
|
|
17
|
import org.apache.log4j.Logger;
|
18
|
import org.junit.Assert;
|
19
|
import org.junit.Test;
|
20
|
import org.unitils.spring.annotation.SpringBeanByType;
|
21
|
|
22
|
import eu.etaxonomy.cdm.model.name.BotanicalName;
|
23
|
import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
|
24
|
import eu.etaxonomy.cdm.model.name.Rank;
|
25
|
import eu.etaxonomy.cdm.model.taxon.Synonym;
|
26
|
import eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType;
|
27
|
import eu.etaxonomy.cdm.model.taxon.Taxon;
|
28
|
import eu.etaxonomy.cdm.model.taxon.TaxonBase;
|
29
|
import eu.etaxonomy.cdm.test.integration.CdmIntegrationTest;
|
30
|
|
31
|
/**
|
32
|
* @author a.mueller
|
33
|
*
|
34
|
*/
|
35
|
public class TaxonServiceImplTest extends CdmIntegrationTest {
|
36
|
private static final Logger logger = Logger.getLogger(TaxonServiceImplTest.class);
|
37
|
|
38
|
@SpringBeanByType
|
39
|
private ITaxonService service;
|
40
|
|
41
|
@SpringBeanByType
|
42
|
private INameService nameService;
|
43
|
|
44
|
/****************** TESTS *****************************/
|
45
|
|
46
|
/**
|
47
|
* Test method for {@link eu.etaxonomy.cdm.api.service.TaxonServiceImpl#getTaxonByUuid(java.util.UUID)}.
|
48
|
*/
|
49
|
@Test
|
50
|
public final void testGetTaxonByUuid() {
|
51
|
Taxon expectedTaxon = Taxon.NewInstance(null, null);
|
52
|
UUID uuid = service.save(expectedTaxon);
|
53
|
TaxonBase<?> actualTaxon = service.find(uuid);
|
54
|
assertEquals(expectedTaxon, actualTaxon);
|
55
|
}
|
56
|
|
57
|
/**
|
58
|
* Test method for {@link eu.etaxonomy.cdm.api.service.TaxonServiceImpl#saveTaxon(eu.etaxonomy.cdm.model.taxon.TaxonBase)}.
|
59
|
*/
|
60
|
@Test
|
61
|
public final void testSaveTaxon() {
|
62
|
Taxon expectedTaxon = Taxon.NewInstance(null, null);
|
63
|
UUID uuid = service.save(expectedTaxon);
|
64
|
TaxonBase<?> actualTaxon = service.find(uuid);
|
65
|
assertEquals(expectedTaxon, actualTaxon);
|
66
|
}
|
67
|
|
68
|
@Test
|
69
|
public final void testSaveOrUpdateTaxon() {
|
70
|
Taxon expectedTaxon = Taxon.NewInstance(null, null);
|
71
|
UUID uuid = service.save(expectedTaxon);
|
72
|
TaxonBase<?> actualTaxon = service.find(uuid);
|
73
|
assertEquals(expectedTaxon, actualTaxon);
|
74
|
|
75
|
actualTaxon.setName(BotanicalName.NewInstance(Rank.SPECIES()));
|
76
|
try{
|
77
|
service.saveOrUpdate(actualTaxon);
|
78
|
}catch(Exception e){
|
79
|
Assert.fail();
|
80
|
}
|
81
|
}
|
82
|
/**
|
83
|
* Test method for {@link eu.etaxonomy.cdm.api.service.TaxonServiceImpl#removeTaxon(eu.etaxonomy.cdm.model.taxon.TaxonBase)}.
|
84
|
*/
|
85
|
@Test
|
86
|
public final void testRemoveTaxon() {
|
87
|
Taxon taxon = Taxon.NewInstance(BotanicalName.NewInstance(null), null);
|
88
|
UUID uuid = service.save(taxon);
|
89
|
service.delete(taxon);
|
90
|
TaxonBase<?> actualTaxon = service.find(uuid);
|
91
|
assertNull(actualTaxon);
|
92
|
}
|
93
|
|
94
|
/**
|
95
|
* Test method for
|
96
|
* {@link eu.etaxonomy.cdm.api.service.TaxonServiceImpl#loadTreeBranchTo(eu.etaxonomy.cdm.model.taxon.TaxonNode, eu.etaxonomy.cdm.model.name.Rank, java.util.List)}
|
97
|
* .
|
98
|
*/
|
99
|
|
100
|
/**
|
101
|
* Test method for
|
102
|
* {@link eu.etaxonomy.cdm.api.service.TaxonServiceImpl#searchTaxaByName(java.lang.String, eu.etaxonomy.cdm.model.reference.Reference)}
|
103
|
* .
|
104
|
*/
|
105
|
@Test
|
106
|
public final void testSearchTaxaByName() {
|
107
|
logger.warn("testSearchTaxaByName not yet implemented"); // TODO
|
108
|
}
|
109
|
|
110
|
|
111
|
@Test
|
112
|
public final void testPrintDataSet() {
|
113
|
//printDataSet(System.out);
|
114
|
}
|
115
|
|
116
|
@Test
|
117
|
public final void testMakeTaxonSynonym() {
|
118
|
Rank rank = Rank.SPECIES();
|
119
|
Taxon tax1 = Taxon.NewInstance(BotanicalName.NewInstance(rank, "Test1", null, null, null, null, null, null, null), null);
|
120
|
Synonym synonym = Synonym.NewInstance(BotanicalName.NewInstance(rank, "Test2", null, null, null, null, null, null, null), null);
|
121
|
tax1.addHomotypicSynonym(synonym, null, null);
|
122
|
UUID uuidTaxon = service.save(tax1);
|
123
|
UUID uuidSyn = service.save(synonym);
|
124
|
|
125
|
service.swapSynonymAndAcceptedTaxon(synonym, tax1);
|
126
|
|
127
|
TaxonBase<?> tax = service.find(uuidTaxon);
|
128
|
TaxonBase<?> syn = service.find(uuidSyn);
|
129
|
HomotypicalGroup groupTest = tax.getHomotypicGroup();
|
130
|
HomotypicalGroup groupTest2 = syn.getHomotypicGroup();
|
131
|
assertEquals(groupTest, groupTest2);
|
132
|
}
|
133
|
|
134
|
@Test
|
135
|
public final void testMakeSynonymTaxon(){
|
136
|
Rank rank = Rank.SPECIES();
|
137
|
//HomotypicalGroup group = HomotypicalGroup.NewInstance();
|
138
|
Taxon tax1 = Taxon.NewInstance(BotanicalName.NewInstance(rank, "Test1", null, null, null, null, null, null, null), null);
|
139
|
Taxon tax2 = Taxon.NewInstance(BotanicalName.NewInstance(rank, "Test3", null, null, null, null, null, null, null), null);
|
140
|
Synonym synonym = Synonym.NewInstance(BotanicalName.NewInstance(rank, "Test2", null, null, null, null, null, null, null), null);
|
141
|
//tax2.addHeterotypicSynonymName(synonym.getName());
|
142
|
tax2.addSynonym(synonym, SynonymRelationshipType.HETEROTYPIC_SYNONYM_OF());
|
143
|
BotanicalName name = (BotanicalName)synonym.getName();
|
144
|
UUID uuidTaxon = service.save(tax1);
|
145
|
UUID uuidSyn = service.save(synonym);
|
146
|
UUID uuidGenus = service.save(tax2);
|
147
|
|
148
|
Taxon tax = service.changeSynonymToAcceptedTaxon(synonym, tax2, true, true, null, null);
|
149
|
TaxonBase<?> syn = service.find(uuidSyn);
|
150
|
assertNull(syn);
|
151
|
|
152
|
|
153
|
|
154
|
}
|
155
|
|
156
|
}
|