Revision 89e19a51
Added by Andreas Müller over 2 years ago
| cdmlib-remote/src/test/java/eu/etaxonomy/cdm/test/function/TestScript.java | ||
|---|---|---|
| 10 | 10 |
package eu.etaxonomy.cdm.test.function; |
| 11 | 11 |
|
| 12 | 12 |
import java.io.IOException; |
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import java.sql.ResultSet; |
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import java.sql.SQLException; |
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import java.util.ArrayList; |
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import java.util.Arrays; |
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import java.util.List; |
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import java.util.Set; |
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import java.util.UUID; |
| 20 | 14 |
|
| 21 | 15 |
import javax.servlet.http.HttpServletResponse; |
| 22 | 16 |
|
| 23 | 17 |
import org.apache.log4j.Logger; |
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import org.hibernate.Query; |
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import org.hibernate.Session; |
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import org.springframework.transaction.TransactionStatus; |
|
| 27 | 18 |
|
| 28 | 19 |
import eu.etaxonomy.cdm.api.application.CdmApplicationController; |
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import eu.etaxonomy.cdm.api.application.CdmApplicationUtils; |
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import eu.etaxonomy.cdm.api.service.ITaxonNodeService; |
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import eu.etaxonomy.cdm.api.service.ITaxonService; |
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import eu.etaxonomy.cdm.api.service.ITermService; |
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import eu.etaxonomy.cdm.api.service.UpdateResult; |
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import eu.etaxonomy.cdm.api.service.config.TaxonDeletionConfigurator; |
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import eu.etaxonomy.cdm.api.service.description.AggregationMode; |
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import eu.etaxonomy.cdm.api.service.description.DistributionAggregationConfiguration; |
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import eu.etaxonomy.cdm.api.service.description.StructuredDescriptionAggregationConfiguration; |
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import eu.etaxonomy.cdm.api.service.dto.GroupedTaxonDTO; |
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import eu.etaxonomy.cdm.api.util.TaxonRelationshipEdge; |
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import eu.etaxonomy.cdm.common.monitor.DefaultProgressMonitor; |
|
| 41 | 20 |
import eu.etaxonomy.cdm.config.AccountStore; |
| 42 | 21 |
import eu.etaxonomy.cdm.database.CdmDataSource; |
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import eu.etaxonomy.cdm.database.CdmPersistentDataSource; |
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import eu.etaxonomy.cdm.database.DataSourceNotFoundException; |
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import eu.etaxonomy.cdm.database.DatabaseTypeEnum; |
|
| 46 | 22 |
import eu.etaxonomy.cdm.database.DbSchemaValidation; |
| 47 | 23 |
import eu.etaxonomy.cdm.database.ICdmDataSource; |
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import eu.etaxonomy.cdm.filter.TaxonNodeFilter; |
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import eu.etaxonomy.cdm.model.agent.Person; |
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import eu.etaxonomy.cdm.model.description.DescriptiveDataSet; |
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import eu.etaxonomy.cdm.model.description.Distribution; |
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import eu.etaxonomy.cdm.model.description.PresenceAbsenceTerm; |
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import eu.etaxonomy.cdm.model.description.TaxonDescription; |
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import eu.etaxonomy.cdm.model.location.NamedArea; |
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import eu.etaxonomy.cdm.model.name.HybridRelationshipType; |
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import eu.etaxonomy.cdm.model.name.IBotanicalName; |
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import eu.etaxonomy.cdm.model.name.NameRelationshipType; |
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import eu.etaxonomy.cdm.model.name.Rank; |
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import eu.etaxonomy.cdm.model.name.TaxonName; |
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import eu.etaxonomy.cdm.model.name.TaxonNameFactory; |
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import eu.etaxonomy.cdm.model.reference.Reference; |
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import eu.etaxonomy.cdm.model.reference.ReferenceFactory; |
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import eu.etaxonomy.cdm.model.taxon.Classification; |
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import eu.etaxonomy.cdm.model.taxon.Taxon; |
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import eu.etaxonomy.cdm.model.taxon.TaxonNode; |
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import eu.etaxonomy.cdm.model.term.DefinedTermBase; |
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import eu.etaxonomy.cdm.model.term.TermTree; |
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import eu.etaxonomy.cdm.model.term.init.TermNotFoundException; |
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import eu.etaxonomy.cdm.persistence.dao.initializer.EntityInitStrategy; |
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import eu.etaxonomy.cdm.remote.controller.MediaPortalController; |
|
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import eu.etaxonomy.cdm.remote.controller.TaxonPortalController; |
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import eu.etaxonomy.cdm.remote.controller.TaxonPortalController.EntityMediaContext; |
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import eu.etaxonomy.cdm.remote.controller.util.ControllerUtils; |
|
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import eu.etaxonomy.cdm.remote.editor.UuidList; |
| 75 | 26 |
import eu.etaxonomy.cdm.remote.io.application.CdmRemoteApplicationController; |
| 76 | 27 |
|
| ... | ... | |
| 104 | 55 |
// username = "edit"; |
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// dataSource = CdmDataSource.NewMySqlInstance(server, database, username, AccountStore.readOrStorePassword(server, database, username, null)); |
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server = "160.45.63.171"; |
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database = "cdm_production_campanulaceae"; |
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username = "edit"; |
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dataSource = CdmDataSource.NewMySqlInstance(server, database, username, AccountStore.readOrStorePassword(server, database, username, null)); |
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// server = "160.45.63.171";
|
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// database = "cdm_production_campanulaceae";
|
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// username = "edit";
|
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// dataSource = CdmDataSource.NewMySqlInstance(server, database, username, AccountStore.readOrStorePassword(server, database, username, null));
|
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|
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|
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// server = "test.e-taxonomy.eu"; |
| ... | ... | |
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// dataSource = CdmDataSource.NewH2EmbeddedInstance(database, username, "sa"); |
| 139 | 90 |
|
| 140 | 91 |
|
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// server = "160.45.63.201";
|
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// database = "cdm_integration_cichorieae";
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// username = "edit";
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// dataSource = CdmDataSource.NewMySqlInstance(server, database, username, AccountStore.readOrStorePassword(server, database, username, null));
|
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server = "160.45.63.201"; |
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database = "cdm_integration_cichorieae"; |
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username = "edit"; |
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dataSource = CdmDataSource.NewMySqlInstance(server, database, username, AccountStore.readOrStorePassword(server, database, username, null)); |
|
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|
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CdmApplicationController appCtr = CdmRemoteApplicationController.NewRemoteInstance(dataSource, schema); |
| 147 | 98 |
|
| ... | ... | |
| 164 | 115 |
|
| 165 | 116 |
private void doTemporary(CdmApplicationController appCtr) throws IOException {
|
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UUID taxonUUID = UUID.fromString("cdcacbda-11c0-4cb8-a2e0-8d7abc5ae756");
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UUID taxonUUID = UUID.fromString("85176c77-e4b6-4899-a08b-e257ab09350a");
|
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boolean includeTaxonomicChildren = true; |
| 169 | 120 |
UuidList relationshipUuids = new UuidList(); |
| 170 | 121 |
UuidList relationshipInversUuids = new UuidList(); |
| ... | ... | |
| 173 | 124 |
boolean includeTaxonNameDescriptions = true; |
| 174 | 125 |
HttpServletResponse response = null; |
| 175 | 126 |
TaxonPortalController taxonPortalController = (TaxonPortalController) appCtr.getBean("taxonPortalController");
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ITermService termService = appCtr.getTermService(); |
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EntityInitStrategy taxonInitStrategy = includeTaxonomicChildren? TaxonPortalController.TAXON_WITH_CHILDNODES_INIT_STRATEGY : TaxonPortalController.TAXON_INIT_STRATEGY; |
|
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EntityMediaContext<Taxon> entityMediaContext = taxonPortalController.loadMediaForTaxonAndRelated(taxonUUID, |
|
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relationshipUuids, relationshipInversUuids, |
|
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includeTaxonDescriptions, includeOccurrences, includeTaxonNameDescriptions, |
|
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response, taxonInitStrategy.getPropertyPaths(), |
|
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MediaPortalController.MEDIA_INIT_STRATEGY.getPropertyPaths()); |
|
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|
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if(includeTaxonomicChildren){
|
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Set<TaxonRelationshipEdge> includeRelationships = ControllerUtils.loadIncludeRelationships(relationshipUuids, relationshipInversUuids, termService); |
|
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entityMediaContext.setMedia( |
|
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taxonPortalController.addTaxonomicChildrenMedia(includeTaxonDescriptions, includeOccurrences, includeTaxonNameDescriptions, entityMediaContext.getEntity(), includeRelationships, entityMediaContext.getMedia()) |
|
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); |
|
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} |
|
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} |
|
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|
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private void aggregateDistribution(CdmApplicationController app){
|
|
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|
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System.out.println("agg distr");
|
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DefaultProgressMonitor monitor = DefaultProgressMonitor.NewInstance(); |
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taxonPortalController.doGet(taxonUUID, null, response); |
|
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|
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UUID descriptaceaeUuid = UUID.fromString("5a37c47c-347c-49f8-88ba-2720b194dfb9");
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|
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TaxonNodeFilter filter = TaxonNodeFilter.NewSubtreeInstance(descriptaceaeUuid); |
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filter.setIncludeUnpublished(true); |
|
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List<AggregationMode> aggregationModes = AggregationMode.byToParent(); |
|
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TermTree<PresenceAbsenceTerm> statusOrder = null; |
|
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List<UUID> superAreas = new ArrayList<>(); |
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DistributionAggregationConfiguration config = DistributionAggregationConfiguration.NewInstance(aggregationModes, superAreas, filter, statusOrder, monitor); |
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config.setAdaptBatchSize(false); |
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UpdateResult result = config.getTaskInstance().invoke(config, app); |
|
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System.out.println(result); |
|
| 209 | 130 |
} |
| 210 | 131 |
|
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private void aggregateDDS(CdmApplicationController app){
|
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|
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System.out.println("find dds");
|
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DescriptiveDataSet dds = app.getDescriptiveDataSetService().find(21); |
|
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UUID facciniaSubtreeUuid = UUID.fromString("cf0bc346-a203-4ad7-ad25-477098361db6");
|
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UUID arenarioAdamssubtreeUuid = UUID.fromString("0215e668-0a65-42cd-85e0-d97ce78e758b");
|
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|
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TaxonNodeFilter filter = TaxonNodeFilter.NewSubtreeInstance(arenarioAdamssubtreeUuid); |
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filter.setIncludeUnpublished(true); |
|
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|
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DefaultProgressMonitor monitor = DefaultProgressMonitor.NewInstance(); |
|
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StructuredDescriptionAggregationConfiguration config = StructuredDescriptionAggregationConfiguration.NewInstance(filter, monitor); |
|
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config.setDatasetUuid(dds.getUuid()); |
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config.setAggregationMode(AggregationMode.byWithinTaxonAndToParent()); |
|
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config.setAdaptBatchSize(false); |
|
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UpdateResult result = config.getTaskInstance().invoke(config, app); |
|
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System.out.println(result); |
|
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|
|
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// app.getLongRunningTasksService().invoke(config); |
|
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} |
|
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|
|
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private void listClassification(CdmApplicationController appCtr, List<String> propertyPaths) {
|
|
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try {
|
|
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List<Classification> list = appCtr.getClassificationService().list(null, null, null, null, propertyPaths); |
|
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} catch (Exception e) {
|
|
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e.printStackTrace(); |
|
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logger.warn(e.getMessage()); |
|
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} |
|
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} |
|
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|
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private void testGroupedTaxa(CdmApplicationController appCtr) {
|
|
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UUID classificationUuid = UUID.fromString("91231ebf-1c7a-47b9-a56c-b45b33137244");
|
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UUID taxonUuid1 = UUID.fromString("3bae1c86-1235-4e2e-be63-c7f8c4410527");
|
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UUID taxonUuid2 = UUID.fromString("235d3872-defe-4b92-bf2f-75a7c91510de");
|
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List<UUID> taxonUuids = Arrays.asList(new UUID[]{taxonUuid1, taxonUuid2});
|
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Rank maxRank = DefinedTermBase.getTermByClassAndUUID(Rank.class, UUID.fromString("af5f2481-3192-403f-ae65-7c957a0f02b6"));
|
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Rank minRank = DefinedTermBase.getTermByClassAndUUID(Rank.class, UUID.fromString("78786e16-2a70-48af-a608-494023b91904"));
|
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List<GroupedTaxonDTO> groupedTaxa = appCtr.getClassificationService().groupTaxaByHigherTaxon(taxonUuids, classificationUuid, minRank, maxRank); |
|
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System.out.println(groupedTaxa); |
|
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} |
|
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|
|
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private void addPerson(CdmApplicationController appCtr) {
|
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TransactionStatus tx = appCtr.startTransaction(); |
|
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appCtr.getAgentService().save(Person.NewInstance()); |
|
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appCtr.commitTransaction(tx); |
|
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} |
|
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|
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private void deleteHighLevelNode(CdmApplicationController appCtr) {
|
|
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TransactionStatus tx = appCtr.startTransaction(); |
|
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ITaxonNodeService service = appCtr.getTaxonNodeService(); |
|
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TaxonNode node = service.find(60554); |
|
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// service.delete(node); |
|
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ITaxonService taxonService = appCtr.getTaxonService(); |
|
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Taxon taxon = node.getTaxon(); |
|
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//try {
|
|
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taxonService.deleteTaxon(taxon.getUuid(), new TaxonDeletionConfigurator(), node.getClassification().getUuid()); |
|
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|
|
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/*} catch (DataChangeNoRollbackException e) {
|
|
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e.printStackTrace(); |
|
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}*/ |
|
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try {
|
|
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appCtr.commitTransaction(tx); |
|
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} catch (Exception e) {
|
|
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// TODO Auto-generated catch block |
|
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e.printStackTrace(); |
|
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} |
|
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TaxonNode node2 = service.find(60554); |
|
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|
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|
|
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} |
|
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|
|
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// private void insertSomeData(CdmApplicationController appCtr) {
|
|
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// Classification cl = Classification.NewInstance("myClass");
|
|
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// TaxonNode node1 = cl.addChildTaxon(Taxon.NewInstance(TaxonNameFactory.NewBotanicalInstance(null), null), null, null); |
|
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// appCtr.getClassificationService().save(cl); |
|
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// |
|
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// Taxon t2 = Taxon.NewInstance(null, null); |
|
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// t2.setTitleCache("Taxon2", true);
|
|
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// TaxonNode node2 = node1.addChildTaxon(t2, null, null); |
|
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// |
|
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// Taxon t3 = Taxon.NewInstance(null, null); |
|
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// t3.setTitleCache("Taxon3", true);
|
|
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// TaxonNode node3 = node1.addChildTaxon(t3, 0, null, null); |
|
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// |
|
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// appCtr.getTaxonNodeService().saveOrUpdate(node1); |
|
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// |
|
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// cl.addChildNode(node3, 0, null, null); |
|
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// appCtr.getTaxonNodeService().saveOrUpdate(node3); |
|
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// appCtr.getClassificationService().saveOrUpdate(cl); |
|
| 300 |
// |
|
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// TermTree<Feature> ft1 = TermTree.NewInstance(); |
|
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// FeatureNode fn1 = TermNode.NewInstance((Feature)null); |
|
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// ft1.getRoot().addChild(fn1); |
|
| 304 |
// appCtr.getFeatureNodeService().save(fn1); |
|
| 305 |
// |
|
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// TermNode fn2 = TermNode.NewInstance((Feature)null); |
|
| 307 |
// fn1.addChild(fn2); |
|
| 308 |
// |
|
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// TermNode fn3 = TermNode.NewInstance((Feature)null); |
|
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// fn1.addChild(fn2, 0); |
|
| 311 |
// |
|
| 312 |
// appCtr.getFeatureNodeService().saveOrUpdate(fn1); |
|
| 313 |
// |
|
| 314 |
// ft1.getRoot().addChild(fn3, 0); |
|
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// appCtr.getFeatureNodeService().saveOrUpdate(fn3); |
|
| 316 |
// appCtr.getFeatureTreeService().saveOrUpdate(ft1); |
|
| 317 |
// } |
|
| 318 |
|
|
| 319 |
private void testDatabaseChange() throws DataSourceNotFoundException{
|
|
| 320 |
CdmApplicationController appCtr; |
|
| 321 |
appCtr = CdmApplicationController.NewInstance(); |
|
| 322 |
|
|
| 323 |
// DatabaseTypeEnum dbType = DatabaseTypeEnum.MySQL; |
|
| 324 |
// String server = "192.168.2.10"; |
|
| 325 |
// String database = "cdm_test_andreas"; |
|
| 326 |
// String user = "edit"; |
|
| 327 |
// String pwd = "wp5"; |
|
| 328 |
// |
|
| 329 |
DatabaseTypeEnum dbType = DatabaseTypeEnum.SqlServer2005; |
|
| 330 |
String server = "LAPTOPHP"; |
|
| 331 |
String database = "cdmTest"; |
|
| 332 |
String username = "edit"; |
|
| 333 |
String password = ""; |
|
| 334 |
|
|
| 335 |
ICdmDataSource dataSource = CdmDataSource.NewInstance(DatabaseTypeEnum.SqlServer2005, "LAPTOPHP", "cdmTest", DatabaseTypeEnum.SqlServer2005.getDefaultPort(), "edit", ""); |
|
| 336 |
|
|
| 337 |
appCtr.getDatabaseService().saveDataSource("testSqlServer", dataSource);
|
|
| 338 |
try {
|
|
| 339 |
appCtr.getDatabaseService().connectToDatabase(dbType, server, database, username, password); |
|
| 340 |
} catch (TermNotFoundException e) {
|
|
| 341 |
// TODO Auto-generated catch block |
|
| 342 |
e.printStackTrace(); |
|
| 343 |
} |
|
| 344 |
|
|
| 345 |
appCtr.close(); |
|
| 346 |
} |
|
| 347 |
|
|
| 348 |
private void testSqlServer2005(){
|
|
| 349 |
DatabaseTypeEnum databaseTypeEnum = DatabaseTypeEnum.SqlServer2005; |
|
| 350 |
String server = "LAPTOPHP"; |
|
| 351 |
String database = "cdmTest"; |
|
| 352 |
String username = "edit"; |
|
| 353 |
String password = ""; |
|
| 354 |
|
|
| 355 |
ICdmDataSource dataSource = CdmDataSource.NewInstance(databaseTypeEnum, server, database, databaseTypeEnum.getDefaultPort(), username, password); |
|
| 356 |
|
|
| 357 |
CdmPersistentDataSource ds = CdmPersistentDataSource.save("testSqlServer", dataSource);
|
|
| 358 |
|
|
| 359 |
CdmApplicationController appCtr = CdmApplicationController.NewInstance(ds); |
|
| 360 |
Person agent = Person.NewInstance(); |
|
| 361 |
appCtr.getAgentService().save(agent); |
|
| 362 |
TaxonName tn = TaxonNameFactory.NewBotanicalInstance(null); |
|
| 363 |
appCtr.getNameService().save(tn); |
|
| 364 |
appCtr.close(); |
|
| 365 |
|
|
| 366 |
} |
|
| 367 |
|
|
| 368 |
private void testLocalHsql(){
|
|
| 369 |
CdmApplicationController appCtr = null; |
|
| 370 |
try {
|
|
| 371 |
CdmPersistentDataSource ds = CdmPersistentDataSource.NewLocalHsqlInstance(); |
|
| 372 |
appCtr = CdmApplicationController.NewInstance(ds); |
|
| 373 |
List<?> l = appCtr.getNameService().list(null,5, 1,null,null); |
|
| 374 |
System.out.println(l); |
|
| 375 |
//Agent agent = new Agent(); |
|
| 376 |
//appCtr.getAgentService().saveAgent(agent); |
|
| 377 |
appCtr.close(); |
|
| 378 |
} catch (RuntimeException e) {
|
|
| 379 |
logger.error("Runtime Exception");
|
|
| 380 |
e.printStackTrace(); |
|
| 381 |
if (appCtr != null){
|
|
| 382 |
appCtr.close(); |
|
| 383 |
} |
|
| 384 |
|
|
| 385 |
} catch (DataSourceNotFoundException e) {
|
|
| 386 |
logger.error("Runtime Exception");
|
|
| 387 |
e.printStackTrace(); |
|
| 388 |
} |
|
| 389 |
} |
|
| 390 |
|
|
| 391 |
private void testLocalH2(){
|
|
| 392 |
|
|
| 393 |
DbSchemaValidation validation = DbSchemaValidation.CREATE; |
|
| 394 |
ICdmDataSource ds = |
|
| 395 |
CdmDataSource.NewH2EmbeddedInstance("cdm", "sa", "", null);
|
|
| 396 |
// ds = |
|
| 397 |
// CdmPersistentDataSource.NewInstance("localH2");
|
|
| 398 |
CdmApplicationController appCtr = CdmApplicationController.NewInstance(ds, validation); |
|
| 399 |
|
|
| 400 |
boolean exists = appCtr.getUserService().userExists("admin");
|
|
| 401 |
try {
|
|
| 402 |
IBotanicalName name = TaxonNameFactory.NewBotanicalInstance(null); |
|
| 403 |
String nameCache = "testName"; |
|
| 404 |
name.setNameCache(nameCache); |
|
| 405 |
name.setTitleCache(nameCache, true); |
|
| 406 |
Reference ref = ReferenceFactory.newGeneric(); |
|
| 407 |
ref.setTitleCache("mySec", true);
|
|
| 408 |
Taxon taxon = Taxon.NewInstance(name, ref); |
|
| 409 |
TaxonDescription description = TaxonDescription.NewInstance(); |
|
| 410 |
taxon.addDescription(description); |
|
| 411 |
NamedArea area1 = appCtr.getTermService().getAreaByTdwgAbbreviation("GER");
|
|
| 412 |
Distribution distribution = Distribution.NewInstance(area1, PresenceAbsenceTerm.PRESENT()); |
|
| 413 |
description.addElement(distribution); |
|
| 414 |
|
|
| 415 |
List<Distribution> distrList = new ArrayList<Distribution>(); |
|
| 416 |
distrList.add(distribution); |
|
| 417 |
List<NamedArea> areaList = new ArrayList<NamedArea>(); |
|
| 418 |
areaList.add(area1); |
|
| 419 |
|
|
| 420 |
// distribution.getInDescription().get |
|
| 421 |
appCtr.getTaxonService().save(taxon); |
|
| 422 |
|
|
| 423 |
System.out.println(taxon.getDescriptions().size()); |
|
| 424 |
|
|
| 425 |
TransactionStatus txStatus = appCtr.startTransaction(); |
|
| 426 |
|
|
| 427 |
Session session = appCtr.getSessionFactory().getCurrentSession(); |
|
| 428 |
|
|
| 429 |
//String hqlQuery = "from DescriptionBase d join d.elements as e " |
|
| 430 |
// String hqlQuery = "from Taxon t join t.descriptions as d "+ |
|
| 431 |
// " inner join d.elements e on e member of d " |
|
| 432 |
// + |
|
| 433 |
// "";//" where e.area = :namedArea " ; |
|
| 434 |
String hqlQuery = "Select t from Distribution e join e.inDescription d join d.taxon t join t.name n "+ |
|
| 435 |
" WHERE e.area in (:namedArea) AND n.nameCache = :nameCache "; |
|
| 436 |
Query query = session.createQuery(hqlQuery); |
|
| 437 |
|
|
| 438 |
//query.setEntity("namedArea", area1);
|
|
| 439 |
query.setParameter("nameCache", nameCache);
|
|
| 440 |
query.setParameterList("namedArea", areaList);
|
|
| 441 |
List resultList = query.list(); |
|
| 442 |
//List list = appCtr.getCommonService().getHqlResult(hqlQuery); |
|
| 443 |
|
|
| 444 |
for (Object o:resultList){
|
|
| 445 |
System.out.println(o); |
|
| 446 |
} |
|
| 447 |
appCtr.commitTransaction(txStatus); |
|
| 448 |
|
|
| 449 |
//System.out.println(l); |
|
| 450 |
//Agent agent = new Agent(); |
|
| 451 |
//appCtr.getAgentService().saveAgent(agent); |
|
| 452 |
appCtr.close(); |
|
| 453 |
} catch (RuntimeException e) {
|
|
| 454 |
logger.error("Runtime Exception");
|
|
| 455 |
e.printStackTrace(); |
|
| 456 |
appCtr.close(); |
|
| 457 |
|
|
| 458 |
} |
|
| 459 |
} |
|
| 460 |
|
|
| 461 |
private boolean testWritableResourceDirectory() throws IOException{
|
|
| 462 |
CdmApplicationUtils.getWritableResourceDir(); |
|
| 463 |
return true; |
|
| 464 |
} |
|
| 465 |
|
|
| 466 |
private boolean testH2(){
|
|
| 467 |
// testLocalH2(); |
|
| 468 |
// if (true)return true; |
|
| 469 |
|
|
| 470 |
DbSchemaValidation validation = DbSchemaValidation.CREATE; |
|
| 471 |
ICdmDataSource ds = |
|
| 472 |
CdmDataSource.NewH2EmbeddedInstance("cdm", "sa", "", null);
|
|
| 473 |
//CdmDataSource.NewH2EmbeddedInstance("cdm", "sa", "");
|
|
| 474 |
// ds = |
|
| 475 |
// CdmPersistentDataSource.NewInstance("localH2");
|
|
| 476 |
CdmApplicationController appCtr = CdmApplicationController.NewInstance(ds, validation); |
|
| 477 |
try {
|
|
| 478 |
TaxonName botName1 = TaxonNameFactory.NewBotanicalInstance(Rank.SPECIES()); |
|
| 479 |
TaxonName botName2 = TaxonNameFactory.NewBotanicalInstance(Rank.SPECIES()); |
|
| 480 |
IBotanicalName hybridName = TaxonNameFactory.NewBotanicalInstance(Rank.SPECIES()); |
|
| 481 |
botName1.addRelationshipToName(botName2, NameRelationshipType.ORTHOGRAPHIC_VARIANT(), null, null); |
|
| 482 |
UUID uuid1 = botName1.getUuid(); |
|
| 483 |
UUID uuid2 = botName2.getUuid(); |
|
| 484 |
try {
|
|
| 485 |
Logger loggerTrace = Logger.getLogger("org.hibernate.type");
|
|
| 486 |
//loggerTrace.setLevel(Level.TRACE); |
|
| 487 |
System.out.println(logger.getName()); |
|
| 488 |
|
|
| 489 |
appCtr.getNameService().save(botName1); |
|
| 490 |
ResultSet rs = ds.executeQuery("Select count(*) as n FROM NameRelationship");
|
|
| 491 |
rs.next(); |
|
| 492 |
int c = rs.getInt("n");
|
|
| 493 |
System.out.println("Begin :" + c);
|
|
| 494 |
|
|
| 495 |
botName1.removeRelationToTaxonName(botName2); |
|
| 496 |
botName1.setSpecificEpithet("DELETED");
|
|
| 497 |
botName2.addHybridParent(hybridName, HybridRelationshipType.FIRST_PARENT(), null); |
|
| 498 |
|
|
| 499 |
TransactionStatus tx = appCtr.startTransaction(); |
|
| 500 |
appCtr.getNameService().saveOrUpdate(botName2); |
|
| 501 |
rs = ds.executeQuery("Select count(*) as n FROM NameRelationship");
|
|
| 502 |
rs.next(); |
|
| 503 |
c = rs.getInt("n");
|
|
| 504 |
System.out.println("End: " + c);
|
|
| 505 |
|
|
| 506 |
appCtr.commitTransaction(tx); |
|
| 507 |
|
|
| 508 |
appCtr.getNameService().saveOrUpdate(botName1); |
|
| 509 |
|
|
| 510 |
rs = ds.executeQuery("Select count(*) as n FROM NameRelationship");
|
|
| 511 |
rs.next(); |
|
| 512 |
c = rs.getInt("n");
|
|
| 513 |
System.out.println("End: " + c);
|
|
| 514 |
|
|
| 515 |
} catch (SQLException e) {
|
|
| 516 |
// TODO Auto-generated catch block |
|
| 517 |
e.printStackTrace(); |
|
| 518 |
} |
|
| 519 |
|
|
| 520 |
|
|
| 521 |
//Agent agent = new Agent(); |
|
| 522 |
//appCtr.getAgentService().saveAgent(agent); |
|
| 523 |
appCtr.close(); |
|
| 524 |
return true; |
|
| 525 |
} catch (RuntimeException e) {
|
|
| 526 |
logger.error("Runtime Exception");
|
|
| 527 |
e.printStackTrace(); |
|
| 528 |
appCtr.close(); |
|
| 529 |
|
|
| 530 |
} |
|
| 531 |
return false; |
|
| 532 |
} |
|
| 533 |
|
|
| 534 | 132 |
private void test(){
|
| 535 |
System.out.println("Start Datasource");
|
|
| 133 |
System.out.println("Start TestScript");
|
|
| 536 | 134 |
testNewConfigControler(); |
| 537 | 135 |
//testDatabaseChange(); |
| 538 | 136 |
|
| 539 |
//testSqlServer(); |
|
| 540 |
|
|
| 541 |
//CdmUtils.findLibrary(au.com.bytecode.opencsv.CSVReader.class); |
|
| 542 |
//testPostgreServer(); |
|
| 543 |
//testLocalHsql(); |
|
| 544 |
//testLocalH2(); |
|
| 545 |
//testWritableResourceDirectory(); |
|
| 546 |
// testH2(); |
|
| 547 |
System.out.println("\nEnd Datasource");
|
|
| 137 |
System.out.println("\nEnd TestScript");
|
|
| 548 | 138 |
} |
| 549 | 139 |
|
| 550 | 140 |
public static void main(String[] args) {
|
Also available in: Unified diff
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