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/**
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* Copyright (C) 2007 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.cdm.model.location;
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import java.util.ArrayList;
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import java.util.HashMap;
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import java.util.HashSet;
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import java.util.List;
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import java.util.Map;
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import java.util.Set;
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import java.util.UUID;
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import javax.persistence.Entity;
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import javax.persistence.FetchType;
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import javax.persistence.JoinTable;
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import javax.persistence.ManyToMany;
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import javax.persistence.ManyToOne;
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import javax.persistence.Transient;
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import javax.xml.bind.annotation.XmlAccessType;
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import javax.xml.bind.annotation.XmlAccessorType;
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import javax.xml.bind.annotation.XmlElement;
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import javax.xml.bind.annotation.XmlElementWrapper;
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import javax.xml.bind.annotation.XmlIDREF;
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import javax.xml.bind.annotation.XmlRootElement;
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import javax.xml.bind.annotation.XmlSchemaType;
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import javax.xml.bind.annotation.XmlSeeAlso;
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import javax.xml.bind.annotation.XmlType;
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import org.apache.commons.lang.StringUtils;
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import org.apache.log4j.Logger;
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import org.hibernate.annotations.Cascade;
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import org.hibernate.annotations.CascadeType;
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import org.hibernate.envers.Audited;
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import org.hibernate.search.annotations.ClassBridge;
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import org.hibernate.search.annotations.Parameter;
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import eu.etaxonomy.cdm.common.CdmUtils;
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import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
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import eu.etaxonomy.cdm.hibernate.search.DefinedTermBaseClassBridge;
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import eu.etaxonomy.cdm.model.common.CdmBase;
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import eu.etaxonomy.cdm.model.common.DefaultTermInitializer;
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import eu.etaxonomy.cdm.model.common.DefinedTermBase;
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import eu.etaxonomy.cdm.model.common.Language;
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import eu.etaxonomy.cdm.model.common.OrderedTermBase;
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import eu.etaxonomy.cdm.model.common.Representation;
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import eu.etaxonomy.cdm.model.common.TermType;
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import eu.etaxonomy.cdm.model.common.TermVocabulary;
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import eu.etaxonomy.cdm.model.common.TimePeriod;
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import eu.etaxonomy.cdm.model.media.Media;
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/**
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* @author m.doering
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* @since 08-Nov-2007 13:06:36
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*/
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@XmlAccessorType(XmlAccessType.PROPERTY)
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@XmlType(name = "NamedArea", propOrder = {
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"kindOf",
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"generalizationOf",
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"partOf",
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"includes",
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"validPeriod",
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"shape",
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"pointApproximation",
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"countries",
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"type",
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"level"
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})
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@XmlRootElement(name = "NamedArea")
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@XmlSeeAlso({
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Country.class
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})
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@Entity
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//@Indexed disabled to reduce clutter in indexes, since this type is not used by any search
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//@Indexed(index = "eu.etaxonomy.cdm.model.common.DefinedTermBase")
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@Audited
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@ClassBridge(impl=DefinedTermBaseClassBridge.class, params={
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@Parameter(name="includeParentTerms", value="true")
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})
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public class NamedArea extends OrderedTermBase<NamedArea> implements Cloneable {
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private static final long serialVersionUID = 6248434369557403036L;
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private static final Logger logger = Logger.getLogger(NamedArea.class);
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//Continent UUIDs
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private static final UUID uuidEurope = UUID.fromString("3b69f979-408c-4080-b573-0ad78a315610");
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private static final UUID uuidAfrica = UUID.fromString("c204c529-d8d2-458f-b939-96f0ebd2cbe8");
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private static final UUID uuidAsiaTemperate = UUID.fromString("7f4f4f89-3b4c-475d-929f-144109bd8457");
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private static final UUID uuidAsiaTropical = UUID.fromString("f8039275-d2c0-4753-a1ab-0336642a1499");
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private static final UUID uuidNAmerica = UUID.fromString("81d8aca3-ddd7-4537-9f2b-5327c95b6e28");
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private static final UUID uuidSAmerica = UUID.fromString("12b861c9-c922-498c-8b1a-62afc26d19e3");
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private static final UUID uuidAustralasia = UUID.fromString("a2afdb9a-04a0-434c-9e75-d07dbeb86526");
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private static final UUID uuidPacific = UUID.fromString("c57adcff-5213-45f0-a5f0-97a9f5c0f1fe");
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private static final UUID uuidAntarctica = UUID.fromString("71fd9ab7-9b07-4eb6-8e54-c519aff56728");
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public static final UUID uuidTdwgAreaVocabulary = UUID.fromString("1fb40504-d1d7-44b0-9731-374fbe6cac77");
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public static final UUID uuidContinentVocabulary = UUID.fromString("e72cbcb6-58f8-4201-9774-15d0c6abc128");
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public static final UUID uuidWaterbodyVocabulary = UUID.fromString("35a62b25-f541-4f12-a7c7-17d90dec3e03");
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private static final UUID uuidArcticOcean = UUID.fromString("af4271e5-8897-4e6f-9db7-54ea4f28cfc0");
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private static final UUID uuidAtlanticOcean = UUID.fromString("77e79804-1b17-4c99-873b-933fe216e3da");
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private static final UUID uuidPacificOcean = UUID.fromString("3d68a327-104c-49d5-a2d8-c71c6600181b");
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private static final UUID uuidIndianOcean = UUID.fromString("ff744a37-5990-462c-9c20-1e85a9943851");
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private static final UUID uuidSouthernOcean = UUID.fromString("ef04f363-f67f-4a2c-8d98-110de4c5f654");
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private static final UUID uuidMediterraneanSea = UUID.fromString("8811a47e-29d6-4455-8f83-8916b78a692f");
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private static final UUID uuidBlackSea = UUID.fromString("4cb4bbae-9aab-426c-9025-e34f809165af");
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private static final UUID uuidCaspianSea = UUID.fromString("598fec0e-b93a-4947-a1f3-601e380797f7");
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private static final UUID uuidRedSea = UUID.fromString("ee69385e-6c80-405c-be6e-974e9fd1e297");
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private static final UUID uuidPersianGulf = UUID.fromString("8dc16e70-74b8-4143-95cf-a659a319a854");
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private static Map<String, UUID> tdwgAbbrevMap = null;
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private static Map<String, UUID> tdwgLabelMap = null;
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private static Map<UUID, NamedArea> tdwgTermMap = null;
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private static Map<UUID, NamedArea> continentMap = null;
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private static Map<UUID, NamedArea> waterbodyMap = null;
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private static Map<UUID, NamedArea> termMap = null;
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public static final NamedArea ARCTICOCEAN () { return waterbodyMap.get(uuidArcticOcean );}
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public static final NamedArea ATLANTICOCEAN () { return waterbodyMap.get(uuidAtlanticOcean );}
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public static final NamedArea PACIFICOCEAN () { return waterbodyMap.get(uuidPacificOcean );}
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public static final NamedArea INDIANOCEAN () { return waterbodyMap.get(uuidIndianOcean );}
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public static final NamedArea SOUTHERNOCEAN () { return waterbodyMap.get(uuidSouthernOcean );}
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public static final NamedArea MEDITERRANEANSEA () { return waterbodyMap.get(uuidMediterraneanSea );}
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public static final NamedArea BLACKSEA () { return waterbodyMap.get(uuidBlackSea );}
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public static final NamedArea CASPIANSEA () { return waterbodyMap.get(uuidCaspianSea );}
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public static final NamedArea REDSEA () { return waterbodyMap.get(uuidRedSea );}
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public static final NamedArea PERSIANGULF () { return waterbodyMap.get(uuidPersianGulf );}
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//************************* FACTORY METHODS ****************************************/
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/**
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* Factory method
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* @return
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*/
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public static NamedArea NewInstance(){
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return new NamedArea();
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}
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/**
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* Factory method
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* @return
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*/
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public static NamedArea NewInstance(String description, String label, String labelAbbrev){
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return new NamedArea(description, label, labelAbbrev);
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}
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//**************************** VARIABLES *******************************/
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//description of time valid context of this area. e.g. year range
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private TimePeriod validPeriod = TimePeriod.NewInstance();
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//Binary shape definition for user's defined area as polygon
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@ManyToOne(fetch = FetchType.LAZY)
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@Cascade({CascadeType.SAVE_UPDATE,CascadeType.MERGE})
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private Media shape;
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private Point pointApproximation;
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@ManyToMany(fetch = FetchType.LAZY)
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@JoinTable(name="DefinedTermBase_Country")
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private final Set<Country> countries = new HashSet<Country>();
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@ManyToOne(fetch = FetchType.LAZY)
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private NamedAreaType type;
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@ManyToOne(fetch = FetchType.LAZY)
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private NamedAreaLevel level;
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//********************************** Constructor *******************************************************************/
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//for hibernate use only
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@Deprecated
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protected NamedArea() {
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super(TermType.NamedArea);
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}
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protected NamedArea(String description, String label, String labelAbbrev) {
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super(TermType.NamedArea, description, label, labelAbbrev);
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}
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//********************************* GETTER /SETTER *********************************************/
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@XmlElement(name = "NamedAreaType")
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@XmlIDREF
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@XmlSchemaType(name = "IDREF")
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public NamedAreaType getType(){
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return this.type;
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}
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public void setType(NamedAreaType type){
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this.type = type;
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}
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@XmlElement(name = "NamedAreaLevel")
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@XmlIDREF
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@XmlSchemaType(name = "IDREF")
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public NamedAreaLevel getLevel(){
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return this.level;
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}
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public void setLevel(NamedAreaLevel level){
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this.level = level;
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}
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@XmlElement(name = "ValidPeriod")
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public TimePeriod getValidPeriod(){
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return this.validPeriod;
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}
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public void setValidPeriod(TimePeriod validPeriod){
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this.validPeriod = validPeriod;
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}
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@XmlElement(name = "Shape")
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@XmlIDREF
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@XmlSchemaType(name = "IDREF")
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public Media getShape(){
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return this.shape;
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}
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public void setShape(Media shape){
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this.shape = shape;
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}
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@XmlElementWrapper(name = "Countries")
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@XmlElement(name = "Country")
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@XmlIDREF
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@XmlSchemaType(name = "IDREF")
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public Set<Country> getCountries() {
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return countries;
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}
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public void addCountry(Country country) {
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this.countries.add(country);
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}
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public void removeCountry(Country country) {
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this.countries.remove(country);
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}
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@XmlElement(name = "PointApproximation")
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public Point getPointApproximation() {
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return pointApproximation;
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}
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public void setPointApproximation(Point pointApproximation) {
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this.pointApproximation = pointApproximation;
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}
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@Override
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@XmlElement(name = "KindOf", namespace = "http://etaxonomy.eu/cdm/model/common/1.0")
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@XmlIDREF
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@XmlSchemaType(name = "IDREF")
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public NamedArea getKindOf(){
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return super.getKindOf();
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}
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@Override
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public void setKindOf(NamedArea kindOf){
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super.setKindOf(kindOf);
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}
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@XmlElement(name = "PartOf", namespace = "http://etaxonomy.eu/cdm/model/common/1.0")
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@XmlIDREF
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@XmlSchemaType(name = "IDREF")
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@Override
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public NamedArea getPartOf(){
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return super.getPartOf();
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}
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/**
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* FIXME this method is a workaround for a casting problem in the getPartOf implementation
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*
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* the partOf instance variable is typically a proxy object of type DefinedTermBase, thus
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* does not coincide with the return value of NamedArea and a ClassCastException is thrown.
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*
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* It is not clear why this only occurs in the editor and not in the webservice where the same
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* method gets called and should lead to the same results.
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*
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* Seems to be a bigger problem although its origin is buggy behaviour of the javassist implementation.
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*/
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@Deprecated
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@Transient
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public NamedArea getPartOfWorkaround(){
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Object area = super.getPartOf();
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if(!(area instanceof NamedArea)){
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area = HibernateProxyHelper.deproxy(area, NamedArea.class);
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}
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return (NamedArea) area;
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}
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@Override
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public void setPartOf(NamedArea partOf){
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this.partOf = partOf;
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}
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@Override
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@XmlElementWrapper(name = "Generalizations", namespace = "http://etaxonomy.eu/cdm/model/common/1.0")
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@XmlElement(name = "GeneralizationOf", namespace = "http://etaxonomy.eu/cdm/model/common/1.0")
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@XmlIDREF
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@XmlSchemaType(name = "IDREF")
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public Set<NamedArea> getGeneralizationOf(){
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return super.getGeneralizationOf();
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}
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@Override
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protected void setGeneralizationOf(Set<NamedArea> value){
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super.setGeneralizationOf(value);
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}
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@Override
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@XmlElementWrapper(name = "Includes", namespace = "http://etaxonomy.eu/cdm/model/common/1.0")
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@XmlElement(name = "Include", namespace = "http://etaxonomy.eu/cdm/model/common/1.0")
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@XmlIDREF
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@XmlSchemaType(name = "IDREF")
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public Set<NamedArea> getIncludes(){
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return super.getIncludes();
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}
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@Override
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protected void setIncludes(Set<NamedArea> includes) {
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super.setIncludes(includes);
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}
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@Override
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public NamedArea readCsvLine(Class<NamedArea> termClass, List<String> csvLine, TermType termType,
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344
|
Map<UUID,DefinedTermBase> terms, boolean abbrevAsId) {
|
|
345
|
NamedArea newInstance = super.readCsvLine(termClass, csvLine, termType, terms, abbrevAsId);
|
|
346
|
|
|
347
|
String levelString = csvLine.get(6);
|
|
348
|
|
|
349
|
if(levelString != null && levelString.length() != 0) {
|
|
350
|
UUID levelUuid = UUID.fromString(levelString);
|
|
351
|
NamedAreaLevel level = (NamedAreaLevel)terms.get(levelUuid);
|
|
352
|
newInstance.setLevel(level);
|
|
353
|
}
|
|
354
|
|
|
355
|
// String partOfString = csvLine.get(7);
|
|
356
|
//
|
|
357
|
// if(partOfString != null && partOfString.length() != 0) {
|
|
358
|
// UUID partOfUuid = UUID.fromString(partOfString);
|
|
359
|
// NamedArea partOf = (NamedArea)terms.get(partOfUuid);
|
|
360
|
// partOf.addIncludes(newInstance);
|
|
361
|
// }
|
|
362
|
return newInstance;
|
|
363
|
}
|
|
364
|
|
|
365
|
@Override
|
|
366
|
protected int partOfCsvLineIndex(){
|
|
367
|
return 7;
|
|
368
|
}
|
|
369
|
|
|
370
|
|
|
371
|
@Override
|
|
372
|
public void resetTerms(){
|
|
373
|
termMap = null;
|
|
374
|
tdwgAbbrevMap = null;
|
|
375
|
tdwgLabelMap = null;
|
|
376
|
tdwgTermMap = null;
|
|
377
|
continentMap = null;
|
|
378
|
waterbodyMap = null;
|
|
379
|
}
|
|
380
|
|
|
381
|
@Deprecated //preliminary, will be removed in future
|
|
382
|
protected static NamedArea getContinentByUuid(UUID uuid){
|
|
383
|
if (continentMap == null){
|
|
384
|
return null;
|
|
385
|
}else{
|
|
386
|
return continentMap.get(uuid);
|
|
387
|
}
|
|
388
|
}
|
|
389
|
|
|
390
|
@Deprecated //preliminary, will be removed in future
|
|
391
|
protected static NamedArea getWaterbodyByUuid(UUID uuid){
|
|
392
|
if (waterbodyMap == null){
|
|
393
|
return null;
|
|
394
|
}else{
|
|
395
|
return waterbodyMap.get(uuid);
|
|
396
|
}
|
|
397
|
}
|
|
398
|
|
|
399
|
@Deprecated //preliminary, will be removed in future
|
|
400
|
protected static NamedArea getTdwgTermByUuid(UUID uuid){
|
|
401
|
if (tdwgTermMap == null){
|
|
402
|
DefaultTermInitializer vocabularyStore = new DefaultTermInitializer();
|
|
403
|
vocabularyStore.initialize();
|
|
404
|
}
|
|
405
|
return tdwgTermMap.get(uuid);
|
|
406
|
}
|
|
407
|
|
|
408
|
@Deprecated //preliminary, will be removed in future
|
|
409
|
public static NamedArea getAreaByTdwgAbbreviation(String tdwgAbbreviation){
|
|
410
|
if (tdwgAbbrevMap == null){
|
|
411
|
initTdwgMaps();
|
|
412
|
}
|
|
413
|
UUID uuid = tdwgAbbrevMap.get(tdwgAbbreviation);
|
|
414
|
if (uuid == null){
|
|
415
|
logger.info("Unknown TDWG area: " + CdmUtils.Nz(tdwgAbbreviation));
|
|
416
|
return null;
|
|
417
|
}
|
|
418
|
return NamedArea.getTdwgTermByUuid(uuid);
|
|
419
|
}
|
|
420
|
|
|
421
|
@Deprecated //preliminary, will be removed in future
|
|
422
|
public static NamedArea getAreaByTdwgLabel(String tdwgLabel){
|
|
423
|
if (tdwgLabelMap == null){
|
|
424
|
initTdwgMaps();
|
|
425
|
}
|
|
426
|
tdwgLabel = tdwgLabel.toLowerCase();
|
|
427
|
UUID uuid = tdwgLabelMap.get(tdwgLabel);
|
|
428
|
if (uuid == null){
|
|
429
|
logger.info("Unknown TDWG area: " + CdmUtils.Nz(tdwgLabel));
|
|
430
|
return null;
|
|
431
|
}
|
|
432
|
return NamedArea.getTdwgTermByUuid(uuid);
|
|
433
|
}
|
|
434
|
|
|
435
|
@Deprecated //preliminary, will be removed in future
|
|
436
|
public static boolean isTdwgAreaLabel(String label){
|
|
437
|
label = (label == null? null : label.toLowerCase());
|
|
438
|
if (tdwgLabelMap.containsKey(label)){
|
|
439
|
return true;
|
|
440
|
}else{
|
|
441
|
return false;
|
|
442
|
}
|
|
443
|
}
|
|
444
|
|
|
445
|
@Deprecated //preliminary, will be removed in future
|
|
446
|
public static boolean isTdwgAreaAbbreviation(String abbrev){
|
|
447
|
if (tdwgAbbrevMap.containsKey(abbrev)){
|
|
448
|
return true;
|
|
449
|
}else{
|
|
450
|
return false;
|
|
451
|
}
|
|
452
|
}
|
|
453
|
|
|
454
|
public static final NamedArea EUROPE(){
|
|
455
|
return getContinentByUuid(uuidEurope);
|
|
456
|
}
|
|
457
|
|
|
458
|
public static final NamedArea AFRICA(){
|
|
459
|
return getContinentByUuid(uuidAfrica);
|
|
460
|
}
|
|
461
|
|
|
462
|
public static final NamedArea ASIA_TEMPERATE(){
|
|
463
|
return getContinentByUuid(uuidAsiaTemperate);
|
|
464
|
}
|
|
465
|
|
|
466
|
public static final NamedArea ASIA_TROPICAL(){
|
|
467
|
return getContinentByUuid(uuidAsiaTropical);
|
|
468
|
}
|
|
469
|
|
|
470
|
public static final NamedArea NORTH_AMERICA(){
|
|
471
|
return getContinentByUuid(uuidNAmerica);
|
|
472
|
}
|
|
473
|
|
|
474
|
public static final NamedArea ANTARCTICA(){
|
|
475
|
return getContinentByUuid(uuidAntarctica);
|
|
476
|
}
|
|
477
|
|
|
478
|
public static final NamedArea SOUTH_AMERICA(){
|
|
479
|
return getContinentByUuid(uuidSAmerica);
|
|
480
|
}
|
|
481
|
|
|
482
|
public static final NamedArea AUSTRALASIA(){
|
|
483
|
return getContinentByUuid(uuidAustralasia);
|
|
484
|
}
|
|
485
|
|
|
486
|
public static final NamedArea PACIFIC(){
|
|
487
|
return getContinentByUuid(uuidPacific);
|
|
488
|
}
|
|
489
|
|
|
490
|
|
|
491
|
protected void setDefaultContinentTerms(TermVocabulary<NamedArea> termVocabulary) {
|
|
492
|
continentMap = new HashMap<>();
|
|
493
|
for (NamedArea term : termVocabulary.getTerms()){
|
|
494
|
continentMap.put(term.getUuid(), term); //TODO casting
|
|
495
|
}
|
|
496
|
}
|
|
497
|
|
|
498
|
protected void setDefaultWaterbodyTerms(TermVocabulary<NamedArea> termVocabulary) {
|
|
499
|
waterbodyMap = new HashMap<>();
|
|
500
|
for (NamedArea term : termVocabulary.getTerms()){
|
|
501
|
waterbodyMap.put(term.getUuid(), term); //TODO casting
|
|
502
|
}
|
|
503
|
}
|
|
504
|
|
|
505
|
protected void setTdwgDefaultTerms(TermVocabulary<NamedArea> tdwgTermVocabulary) {
|
|
506
|
tdwgTermMap = new HashMap<>();
|
|
507
|
for (NamedArea term : tdwgTermVocabulary.getTerms()){
|
|
508
|
tdwgTermMap.put(term.getUuid(), term); //TODO casting
|
|
509
|
addTdwgArea(term);
|
|
510
|
}
|
|
511
|
|
|
512
|
}
|
|
513
|
|
|
514
|
protected static void addTdwgArea(NamedArea area){
|
|
515
|
if (area == null){
|
|
516
|
logger.warn("tdwg area is null");
|
|
517
|
return;
|
|
518
|
}
|
|
519
|
Language lang = Language.DEFAULT();
|
|
520
|
Representation representation = area.getRepresentation(lang);
|
|
521
|
String tdwgAbbrevLabel = representation.getAbbreviatedLabel();
|
|
522
|
String tdwgLabel = representation.getLabel().toLowerCase();
|
|
523
|
if (tdwgAbbrevLabel == null){
|
|
524
|
logger.warn("tdwgLabel = null");
|
|
525
|
return;
|
|
526
|
}
|
|
527
|
//init map
|
|
528
|
if (tdwgAbbrevMap == null){
|
|
529
|
tdwgAbbrevMap = new HashMap<>();
|
|
530
|
}
|
|
531
|
if (tdwgLabelMap == null){
|
|
532
|
tdwgLabelMap = new HashMap<>();
|
|
533
|
}
|
|
534
|
//add to map
|
|
535
|
tdwgAbbrevMap.put(tdwgAbbrevLabel, area.getUuid());
|
|
536
|
tdwgLabelMap.put(tdwgLabel, area.getUuid());
|
|
537
|
//add type
|
|
538
|
area.setType(NamedAreaType.ADMINISTRATION_AREA());
|
|
539
|
//add level
|
|
540
|
if (tdwgAbbrevLabel.trim().length()== 1){
|
|
541
|
area.setLevel(NamedAreaLevel.TDWG_LEVEL1());
|
|
542
|
}else if (tdwgAbbrevLabel.trim().length()== 2){
|
|
543
|
area.setLevel(NamedAreaLevel.TDWG_LEVEL2());
|
|
544
|
}else if (tdwgAbbrevLabel.trim().length()== 3){
|
|
545
|
area.setLevel(NamedAreaLevel.TDWG_LEVEL3());
|
|
546
|
}else if (tdwgAbbrevLabel.trim().length()== 6){
|
|
547
|
area.setLevel(NamedAreaLevel.TDWG_LEVEL4());
|
|
548
|
}else {
|
|
549
|
logger.warn("Unknown TDWG Level " + tdwgAbbrevLabel + "! Unvalid string length (" + tdwgAbbrevLabel.length() +")");
|
|
550
|
}
|
|
551
|
}
|
|
552
|
|
|
553
|
private static void initTdwgMaps(){
|
|
554
|
tdwgLabelMap = new HashMap<>();
|
|
555
|
tdwgAbbrevMap = new HashMap<>();
|
|
556
|
}
|
|
557
|
|
|
558
|
|
|
559
|
|
|
560
|
@Override
|
|
561
|
protected void setDefaultTerms(TermVocabulary<NamedArea> termVocabulary) {
|
|
562
|
if (termVocabulary.getUuid().equals(NamedArea.uuidTdwgAreaVocabulary)){
|
|
563
|
this.setTdwgDefaultTerms(termVocabulary);
|
|
564
|
}else if (termVocabulary.getUuid().equals(NamedArea.uuidContinentVocabulary)){
|
|
565
|
this.setDefaultContinentTerms(termVocabulary);
|
|
566
|
}else if (termVocabulary.getUuid().equals(NamedArea.uuidWaterbodyVocabulary)){
|
|
567
|
this.setDefaultWaterbodyTerms(termVocabulary);
|
|
568
|
}else{
|
|
569
|
termMap = new HashMap<>();
|
|
570
|
for (NamedArea term : termVocabulary.getTerms()){
|
|
571
|
termMap.put(term.getUuid(), term);
|
|
572
|
}
|
|
573
|
}
|
|
574
|
}
|
|
575
|
|
|
576
|
// ************** Hierarchie List ****************************
|
|
577
|
|
|
578
|
/**
|
|
579
|
* This method returns a sorted tree structure which sorts areas by it's level and within the same level
|
|
580
|
* alphabetically (TODO to be tested).
|
|
581
|
* The structure returned is a tree with alternating nodes that represent an area and an areaLevel.
|
|
582
|
* This way also areas that have children belonging to different levels can be handled.<BR>
|
|
583
|
* The root node is always an empty area node which holds the list of top level areaLevels.
|
|
584
|
* AreaLevels with no level defined are handled as if they have a separate level (level="null").
|
|
585
|
*
|
|
586
|
* There is a somehow similar implementation in {@link eu.etaxonomy.cdm.api.service.DistributionTree}
|
|
587
|
*
|
|
588
|
* @param areaList
|
|
589
|
* @return
|
|
590
|
*/
|
|
591
|
public static NamedAreaNode getHiearchieList(List<NamedArea> areaList){
|
|
592
|
NamedAreaNode result = new NamedAreaNode();
|
|
593
|
for (NamedArea area : areaList){
|
|
594
|
List<NamedArea> areaHierarchie = area.getAllLevelList();
|
|
595
|
mergeIntoResult(result, areaHierarchie);
|
|
596
|
}
|
|
597
|
return result;
|
|
598
|
}
|
|
599
|
|
|
600
|
|
|
601
|
public static class LevelNode {
|
|
602
|
NamedAreaLevel level;
|
|
603
|
List<NamedAreaNode> areaList = new ArrayList<>();
|
|
604
|
|
|
605
|
public NamedAreaNode add(NamedArea area) {
|
|
606
|
NamedAreaNode node = new NamedAreaNode();
|
|
607
|
node.area = area;
|
|
608
|
areaList.add(node);
|
|
609
|
return node;
|
|
610
|
|
|
611
|
}
|
|
612
|
|
|
613
|
public NamedAreaNode getNamedAreaNode(NamedArea area) {
|
|
614
|
for (NamedAreaNode node : areaList) {
|
|
615
|
if (node.area.equals(area)) {
|
|
616
|
return node;
|
|
617
|
}
|
|
618
|
}
|
|
619
|
return null;
|
|
620
|
}
|
|
621
|
|
|
622
|
///****************** toString ***********************************************/
|
|
623
|
|
|
624
|
@Override
|
|
625
|
public String toString() {
|
|
626
|
return toString(false, 0);
|
|
627
|
}
|
|
628
|
public String toString(boolean recursive, int identation) {
|
|
629
|
String result = level == null? "" :level.getTitleCache();
|
|
630
|
if (recursive == false){
|
|
631
|
return result;
|
|
632
|
}else{
|
|
633
|
int areaSize = this.areaList.size();
|
|
634
|
if (areaSize > 0){
|
|
635
|
result = "\n" + StringUtils.leftPad("", identation) + result + "[";
|
|
636
|
}
|
|
637
|
boolean isFirst = true;
|
|
638
|
for (NamedAreaNode level: this.areaList){
|
|
639
|
if (isFirst){
|
|
640
|
isFirst = false;
|
|
641
|
}else{
|
|
642
|
result += ",";
|
|
643
|
}
|
|
644
|
result += level.toString(recursive, identation+1);
|
|
645
|
}
|
|
646
|
if (areaSize > 0){
|
|
647
|
result += "]";
|
|
648
|
|
|
649
|
}
|
|
650
|
return result;
|
|
651
|
}
|
|
652
|
}
|
|
653
|
|
|
654
|
}
|
|
655
|
|
|
656
|
public static class NamedAreaNode {
|
|
657
|
NamedArea area;
|
|
658
|
List<LevelNode> levelList = new ArrayList<>();
|
|
659
|
|
|
660
|
public LevelNode getLevelNode(NamedAreaLevel level) {
|
|
661
|
for (LevelNode node : levelList) {
|
|
662
|
if (node.level != null && node.level.equals(level)) {
|
|
663
|
return node;
|
|
664
|
}
|
|
665
|
}
|
|
666
|
return null;
|
|
667
|
}
|
|
668
|
|
|
669
|
public List<NamedAreaNode> getList(NamedAreaLevel level) {
|
|
670
|
LevelNode node = getLevelNode(level);
|
|
671
|
if (node == null) {
|
|
672
|
return new ArrayList<>();
|
|
673
|
} else {
|
|
674
|
return node.areaList;
|
|
675
|
}
|
|
676
|
};
|
|
677
|
|
|
678
|
public boolean contains(NamedAreaLevel level) {
|
|
679
|
if (getList(level).size() > 0) {
|
|
680
|
return true;
|
|
681
|
} else {
|
|
682
|
return false;
|
|
683
|
}
|
|
684
|
}
|
|
685
|
|
|
686
|
public LevelNode add(NamedAreaLevel level) {
|
|
687
|
LevelNode node = new LevelNode();
|
|
688
|
node.level = level;
|
|
689
|
levelList.add(node);
|
|
690
|
return node;
|
|
691
|
}
|
|
692
|
|
|
693
|
@Override
|
|
694
|
public String toString() {
|
|
695
|
return toString(false, 0);
|
|
696
|
}
|
|
697
|
|
|
698
|
public String toString(boolean recursive, int identation) {
|
|
699
|
String result = "";
|
|
700
|
if (area != null) {
|
|
701
|
result = area.getTitleCache();
|
|
702
|
}
|
|
703
|
if (recursive){
|
|
704
|
int levelSize = this.levelList.size();
|
|
705
|
if (levelSize > 0){
|
|
706
|
result = "\n" + StringUtils.leftPad("", identation) + result + "[";
|
|
707
|
}
|
|
708
|
boolean isFirst = true;
|
|
709
|
for (LevelNode level: this.levelList){
|
|
710
|
if (isFirst){
|
|
711
|
isFirst = false;
|
|
712
|
}else{
|
|
713
|
result += ";";
|
|
714
|
}
|
|
715
|
result += level.toString(recursive, identation+1);
|
|
716
|
}
|
|
717
|
if (levelSize > 0){
|
|
718
|
result += "]";
|
|
719
|
|
|
720
|
}
|
|
721
|
return result;
|
|
722
|
}else{
|
|
723
|
int levelSize = this.levelList.size();
|
|
724
|
return result + "[" + levelSize + " sublevel(s)]";
|
|
725
|
}
|
|
726
|
}
|
|
727
|
}
|
|
728
|
|
|
729
|
private static void mergeIntoResult(NamedAreaNode root, List<NamedArea> areaHierarchie) {
|
|
730
|
if (areaHierarchie.isEmpty()) {
|
|
731
|
return;
|
|
732
|
}
|
|
733
|
NamedArea highestArea = areaHierarchie.get(0);
|
|
734
|
NamedAreaLevel level = highestArea.getLevel();
|
|
735
|
NamedAreaNode namedAreaNode;
|
|
736
|
if (! root.contains(level)) {
|
|
737
|
LevelNode node = root.add(level);
|
|
738
|
namedAreaNode = node.add(highestArea);
|
|
739
|
//NEW
|
|
740
|
// root.area = highestArea;
|
|
741
|
} else {
|
|
742
|
LevelNode levelNode = root.getLevelNode(level);
|
|
743
|
namedAreaNode = levelNode.getNamedAreaNode(highestArea);
|
|
744
|
if (namedAreaNode == null) {
|
|
745
|
namedAreaNode = levelNode.add(highestArea);
|
|
746
|
}
|
|
747
|
}
|
|
748
|
List<NamedArea> newList = areaHierarchie.subList(1, areaHierarchie.size());
|
|
749
|
mergeIntoResult(namedAreaNode, newList);
|
|
750
|
|
|
751
|
}
|
|
752
|
|
|
753
|
@Transient
|
|
754
|
public List<NamedArea> getAllLevelList() {
|
|
755
|
List<NamedArea> result = new ArrayList<>();
|
|
756
|
NamedArea copyArea = this;
|
|
757
|
result.add(copyArea);
|
|
758
|
while (copyArea.getPartOf() != null) {
|
|
759
|
copyArea = copyArea.getPartOf();
|
|
760
|
result.add(0, copyArea);
|
|
761
|
}
|
|
762
|
return result;
|
|
763
|
}
|
|
764
|
|
|
765
|
// ******************* toString **********************************/
|
|
766
|
|
|
767
|
@Override
|
|
768
|
public String toString(){
|
|
769
|
String result, label, IdInVocabulary, level = "";
|
|
770
|
|
|
771
|
if (this.level != null){
|
|
772
|
level = this.level.getLabel();
|
|
773
|
}else{
|
|
774
|
level = "no level";
|
|
775
|
}
|
|
776
|
label = this.getLabel();
|
|
777
|
IdInVocabulary = getIdInVocabulary();
|
|
778
|
IdInVocabulary = IdInVocabulary != null ? '<' + IdInVocabulary + '>' : "";
|
|
779
|
result = "[" + level + ", " + IdInVocabulary + label + "]";
|
|
780
|
|
|
781
|
return result;
|
|
782
|
}
|
|
783
|
|
|
784
|
|
|
785
|
|
|
786
|
/**
|
|
787
|
* Returns the label of the named area together with the area level label and the abbreviated label.
|
|
788
|
* This is kind of a formatter method which may be moved to a better place in future.
|
|
789
|
* @param namedArea the area
|
|
790
|
* @param language the preferred language
|
|
791
|
* @return null if namedArea == null, the labelWithLevel otherwise
|
|
792
|
*/
|
|
793
|
public static String labelWithLevel(NamedArea namedArea, Language language) {
|
|
794
|
if (namedArea == null){
|
|
795
|
return null;
|
|
796
|
}
|
|
797
|
NamedArea area = CdmBase.deproxy(namedArea, NamedArea.class);
|
|
798
|
|
|
799
|
StringBuilder title = new StringBuilder();
|
|
800
|
Representation representation = area.getPreferredRepresentation(language);
|
|
801
|
if (representation != null){
|
|
802
|
String areaString = getPreferredAreaLabel(namedArea, representation);
|
|
803
|
|
|
804
|
title.append(areaString);
|
|
805
|
}else if (area.isProtectedTitleCache()){
|
|
806
|
title.append(area.getTitleCache());
|
|
807
|
}else if (StringUtils.isNotBlank(area.getIdInVocabulary())){
|
|
808
|
title.append(area.getIdInVocabulary());
|
|
809
|
}
|
|
810
|
if (area.getLevel() == null){
|
|
811
|
title.append(" - ");
|
|
812
|
title.append(area.getClass().getSimpleName());
|
|
813
|
}else{
|
|
814
|
title.append(" - ");
|
|
815
|
Representation levelRepresentation = area.getLevel().getPreferredRepresentation(language);
|
|
816
|
String levelString = getPreferredAreaLabel(area.getLevel(), levelRepresentation);
|
|
817
|
title.append(levelString);
|
|
818
|
}
|
|
819
|
return title.toString();
|
|
820
|
}
|
|
821
|
|
|
822
|
/**
|
|
823
|
* @param definedTerm
|
|
824
|
* @param representation
|
|
825
|
* @return
|
|
826
|
*/
|
|
827
|
private static String getPreferredAreaLabel(DefinedTermBase<?> definedTerm, Representation representation) {
|
|
828
|
String areaString = null;
|
|
829
|
if (representation != null){
|
|
830
|
areaString = representation.getLabel();
|
|
831
|
if (StringUtils.isBlank(areaString)){
|
|
832
|
areaString = representation.getAbbreviatedLabel();
|
|
833
|
}
|
|
834
|
if (StringUtils.isBlank(areaString)){
|
|
835
|
areaString = representation.getText();
|
|
836
|
}
|
|
837
|
}
|
|
838
|
if (StringUtils.isBlank(areaString)){
|
|
839
|
areaString = definedTerm == null ? null : definedTerm.getTitleCache();
|
|
840
|
}
|
|
841
|
if (StringUtils.isBlank(areaString)){
|
|
842
|
areaString = "no title";
|
|
843
|
}
|
|
844
|
return areaString;
|
|
845
|
}
|
|
846
|
|
|
847
|
//*********************************** CLONE *****************************************/
|
|
848
|
|
|
849
|
/**
|
|
850
|
* Clones <i>this</i> NamedArea. This is a shortcut that enables to create
|
|
851
|
* a new instance that differs only slightly from <i>this</i> NamedArea by
|
|
852
|
* modifying only some of the attributes.
|
|
853
|
*
|
|
854
|
* @see eu.etaxonomy.cdm.model.common.OrderedTermBase#clone()
|
|
855
|
* @see java.lang.Object#clone()
|
|
856
|
*/
|
|
857
|
@Override
|
|
858
|
public Object clone() {
|
|
859
|
NamedArea result;
|
|
860
|
|
|
861
|
result = (NamedArea)super.clone();
|
|
862
|
//no changes to level, pointApproximation, shape, type, validPeriod and countries
|
|
863
|
return result;
|
|
864
|
|
|
865
|
}
|
|
866
|
|
|
867
|
|
|
868
|
}
|