Revision 64367d00
Added by Katja Luther over 8 years ago
| cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/in/TcsXmlTaxonNameImport.java | ||
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import eu.etaxonomy.cdm.model.reference.Reference; |
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import eu.etaxonomy.cdm.model.reference.ReferenceFactory; |
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import eu.etaxonomy.cdm.strategy.exceptions.UnknownCdmTypeException; |
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import eu.etaxonomy.cdm.strategy.parser.INonViralNameParser; |
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import eu.etaxonomy.cdm.strategy.parser.NonViralNameParserImpl; |
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@Component("tcsXmlTaxonNameIO")
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public class TcsXmlTaxonNameImport extends TcsXmlImportBase implements ICdmIO<TcsXmlImportState> {
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| ... | ... | |
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private static int modCount = 5000; |
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private static INonViralNameParser parser = new NonViralNameParserImpl(); |
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public TcsXmlTaxonNameImport(){
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super(); |
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} |
| ... | ... | |
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obligatory = true; |
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Element elSimple = XmlHelp.getSingleChildElement(success, elTaxonName, childName, tcsNamespace, obligatory); |
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String simple = (elSimple == null)? "" : elSimple.getTextNormalize(); |
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nameBase.setTitleCache(simple, false);
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nameBase.setTitleCache(simple, true);
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elementList.add(childName.toString()); |
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childName = "CanonicalName"; |
| ... | ... | |
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childName = "Authorship"; |
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obligatory = false; |
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Element elAuthorship = XmlHelp.getSingleChildElement(success, elCanonicalAuthorship, childName, ns, obligatory); |
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TeamOrPersonBase author = makeNameCitation(elAuthorship, authorMap, success); |
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TeamOrPersonBase author = makeNameCitation(elAuthorship, authorMap, success, nonViralName, false);
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nonViralName.setCombinationAuthorship(author); |
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//setCombinationAuthorship(author); |
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testNoMoreElements(); |
| ... | ... | |
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childName = "BasionymAuthorship"; |
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obligatory = false; |
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Element elBasionymAuthorship = XmlHelp.getSingleChildElement(success, elCanonicalAuthorship, childName, ns, obligatory); |
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TeamOrPersonBase<?> basionymAuthor = makeNameCitation(elBasionymAuthorship, authorMap, success); |
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TeamOrPersonBase<?> basionymAuthor = makeNameCitation(elBasionymAuthorship, authorMap, success, nonViralName, true);
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nonViralName.setBasionymAuthorship(basionymAuthor); |
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testNoMoreElements(); |
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childName = "CombinationAuthorship"; |
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obligatory = false; |
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Element elCombinationAuthorship = XmlHelp.getSingleChildElement(success, elCanonicalAuthorship, childName, ns, obligatory); |
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TeamOrPersonBase<?> combinationAuthor = makeNameCitation(elCombinationAuthorship, authorMap ,success); |
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TeamOrPersonBase<?> combinationAuthor = makeNameCitation(elCombinationAuthorship, authorMap ,success, nonViralName, false);
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if (combinationAuthor != null){
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nonViralName.setCombinationAuthorship(combinationAuthor); |
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} |
| ... | ... | |
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private void makePublishedIn(TaxonNameBase name, Element elPublishedIn, MapWrapper<Reference> referenceMap, ResultWrapper<Boolean> success){
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if (elPublishedIn != null && name != null){
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Class<Reference> clazz = Reference.class; |
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Reference<?> ref = makeReferenceType(elPublishedIn, clazz, referenceMap, success); |
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if (ref instanceof Reference){
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String titleCache = ref.getTitleCache(); |
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ref.setAuthorship(((NonViralName)name).getCombinationAuthorship()); |
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ref.setAbbrevTitleCache(titleCache, true); |
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ref.setAbbrevTitle(titleCache); |
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ref.setProtectedTitleCache(false); |
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name.setNomenclaturalReference(ref); |
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name.setProtectedFullTitleCache(false); |
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name.getFullTitleCache(); |
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name.setProtectedFullTitleCache(true); |
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}else if (ref == null){
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logger.warn("Nomecl. reference could not be created for '" + name.getTitleCache() + "'");
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}else{
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