EDIT

/**

* Copyright (C) 2007 EDIT

* European Distributed Institute of Taxonomy

* http://www.e-taxonomy.eu

*

* The contents of this file are subject to the Mozilla Public License Version 1.1

* See LICENSE.TXT at the top of this package for the full license terms.

*/

package eu.etaxonomy.cdm.test.function;

import java.net.URI;

import java.net.URISyntaxException;

import java.util.Calendar;

import java.util.Set;

import org.apache.log4j.Logger;

import eu.etaxonomy.cdm.model.agent.AgentBase;

import eu.etaxonomy.cdm.model.agent.Institution;

import eu.etaxonomy.cdm.model.agent.Person;

import eu.etaxonomy.cdm.model.common.Annotation;

import eu.etaxonomy.cdm.model.common.IdentifiableSource;

import eu.etaxonomy.cdm.model.common.Language;

import eu.etaxonomy.cdm.model.common.LanguageString;

import eu.etaxonomy.cdm.model.location.Country;

import eu.etaxonomy.cdm.model.location.NamedArea;

import eu.etaxonomy.cdm.model.location.NamedAreaType;

import eu.etaxonomy.cdm.model.media.Media;

import eu.etaxonomy.cdm.model.media.MediaRepresentation;

import eu.etaxonomy.cdm.model.media.MediaRepresentationPart;

import eu.etaxonomy.cdm.model.name.INonViralName;

import eu.etaxonomy.cdm.model.name.TaxonName;

import eu.etaxonomy.cdm.model.occurrence.Collection;

import eu.etaxonomy.cdm.model.occurrence.DerivationEvent;

import eu.etaxonomy.cdm.model.occurrence.DerivationEventType;

import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;

import eu.etaxonomy.cdm.model.occurrence.DeterminationEvent;

import eu.etaxonomy.cdm.model.occurrence.FieldUnit;

import eu.etaxonomy.cdm.model.occurrence.GatheringEvent;

import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;

import eu.etaxonomy.cdm.model.reference.Reference;

import eu.etaxonomy.cdm.model.reference.ReferenceFactory;

import eu.etaxonomy.cdm.model.taxon.Taxon;

import eu.etaxonomy.cdm.strategy.parser.NonViralNameParserImpl;

/**

 * @author AM

 * @since 09.05.2008

 */

public class TestSpecimen {

	private static final Logger logger = Logger.getLogger(TestSpecimen.class);

	public void testSpecimen(){

		logger.info("Create test taxon ...");

		Reference sec = ReferenceFactory.newDatabase();

		String fullNameString = "Acanthostyles saucechicoensis (Hieron.) R.M. King & H. Rob.";

		INonViralName name = NonViralNameParserImpl.NewInstance().parseFullName(fullNameString);

		TaxonName botanicalName = TaxonName.castAndDeproxy(name);

		Taxon taxon = Taxon.NewInstance(botanicalName, sec);

		Collection collection = Collection.NewInstance();

		String collectionCode = "ABCDE";

		collection.setCode(collectionCode);

		Institution institution = Institution.NewInstance();

		String institutionCode = "Inst444";

		institution.setCode(institutionCode);

		collection.setInstitute(institution);

		logger.info("Create determination event");

		DeterminationEvent determinationEvent = DeterminationEvent.NewInstance();

		determinationEvent.setTaxon(taxon);

		Person actor = Person.NewTitledInstance("J. M�ller (JE)");

		determinationEvent.setActor(actor);

		logger.info("Create gathering event");

		GatheringEvent gatheringEvent = GatheringEvent.NewInstance();

		AgentBase<?> gatherer = Person.NewTitledInstance("Lorentz,P.G. s.n.");

		gatheringEvent.setActor(gatherer);

		Calendar gatheringDate = Calendar.getInstance();

		int year = 1922;

		int month = 10;

		int date = 05;

		gatheringDate.set(year, month, date);

		gatheringEvent.setGatheringDate(gatheringDate);

		logger.info("Create locality");

		NamedArea namedArea = NamedArea.NewInstance();

		Country country = Country.ARGENTINAARGENTINEREPUBLIC();

		namedArea.addCountry(country);

		namedArea.setType(NamedAreaType.ADMINISTRATION_AREA());

		// XX

		gatheringEvent.addCollectingArea(namedArea);

		String localityString = "Sierras Pampeanas, Sauce Chico";

		LanguageString locality = LanguageString.NewInstance(localityString, Language.DEFAULT());

		gatheringEvent.setLocality(locality);

		logger.info("Create new specimen ...");

		DerivedUnit specimen = DerivedUnit.NewPreservedSpecimenInstance();

		specimen.setCatalogNumber("JE 00004506");

		specimen.setStoredUnder(botanicalName);   //??

		specimen.setCollection(collection);

		String annotation = "originally designated as type specimen 2000, but corrected 2005-11";

		specimen.addAnnotation(Annotation.NewDefaultLanguageInstance(annotation));

		Media media = Media.NewInstance();

		URI uri = null;

		try {

			uri = new URI("http://131.130.131.9/database/img/imgBrowser.php?ID=50599");

		} catch (URISyntaxException e) {

			throw new RuntimeException(e);

		}

		String mimeType = null;

		Integer size = null;

		MediaRepresentation mediaRepresentation = MediaRepresentation.NewInstance(mimeType, "jpg");

		media.addRepresentation(mediaRepresentation);

		MediaRepresentationPart mediaRepresentationPart = MediaRepresentationPart.NewInstance(uri, size);

		mediaRepresentation.addRepresentationPart(mediaRepresentationPart);

//		specimen.addMedia(media);    #3597

		//Original ID

		String id = "22";

		IdentifiableSource source = IdentifiableSource.NewDataImportInstance(id);

		specimen.addSource(source);

		FieldUnit fieldUnit = FieldUnit.NewInstance();

		DerivationEvent derivationEvent = DerivationEvent.NewInstance(DerivationEventType.GATHERING_IN_SITU());

		derivationEvent.addDerivative(specimen);

		fieldUnit.addDerivationEvent(derivationEvent);

		fieldUnit.setGatheringEvent(gatheringEvent);

		//type information

		//typified by

		logger.warn("Specimen: " + specimen);

		DerivationEvent dEvent = specimen.getDerivedFrom();

		logger.warn("DerivationEvent: " + dEvent);

		Set<SpecimenOrObservationBase> originals = dEvent.getOriginals();

		logger.warn("Originals: " + originals);

		for (SpecimenOrObservationBase<?> original : originals){

			if (original instanceof FieldUnit){

				FieldUnit fieldUnit2 = (FieldUnit)original;

				logger.warn("FieldUnit: " + fieldUnit2);

				GatheringEvent gatheringEvent2= fieldUnit2.getGatheringEvent();

				logger.warn("GatheringEvent: " + gatheringEvent2);

				AgentBase<?> gatherer2 = gatheringEvent2.getCollector();

				logger.warn("Gatherer: "+  gatherer2);

			}

		}

	}

	private void test(){

		System.out.println("Start ...");

		this.testSpecimen();

		System.out.println("\nEnd ...");

	}

	public static void  main(String[] args) {

		TestSpecimen sc = new TestSpecimen();

    	sc.test();

	}

}