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Revision 2720ea2c

Added by Andreas Müller over 3 years ago

cleanup

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cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/molecular/MolecularTest.java
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/**
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* Copyright (C) 2009 EDIT
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* European Distributed Institute of Taxonomy 
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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* 
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
......
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	private PhylogeneticTree phyloTree;
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	private Sequence seq;
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	@BeforeClass
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	public static void setUpBeforeClass() {
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		DefaultTermInitializer vocabularyStore = new DefaultTermInitializer();
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		vocabularyStore.initialize();
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	}
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	/**
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	 * @throws java.lang.Exception
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	 */
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	@Before
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	public void setUp() throws Exception {
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		dnaSample = DnaSample.NewInstance();
......
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	@Test
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	public void testClone() throws URISyntaxException{
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		PhylogeneticTree phyloTreeClone = (PhylogeneticTree)phyloTree.clone();
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		PhylogeneticTree phyloTreeClone = phyloTree.clone();
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		assertTrue(phyloTreeClone.getUsedSequences().size() == 2);
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		assertNotSame(phyloTreeClone.getUsedSequences().iterator().next(), phyloTree.getUsedSequences().iterator().next());
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		Sequence sequenceClone = (Sequence)seq.clone();
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		Sequence sequenceClone = seq.clone();
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//		assertEquals(sequenceClone.getChromatograms().iterator().next().getAllTitles().get(0),seq.getChromatograms().iterator().next().getAllTitles().get(0));
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//
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//		Iterator<Media> mediaIteratorClone = sequenceClone.getChromatograms().iterator();
......
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//		LanguageString titleClone = test.getTitle(Language.ENGLISH());
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//		assertEquals(title, titleClone);
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		assertTrue (sequenceClone.getGeneticAccessionNumber().equals(seq.getGeneticAccessionNumber()));
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		assertNotNull(sequenceClone.getGenBankUri());
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		assertTrue (sequenceClone.getGenBankUri().equals(seq.getGenBankUri()));
......
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				} else {
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                    testBool = false;
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                }
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			}
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		}
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		assertTrue(testBool);
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	}
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}
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}

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