EDIT

/**

* Copyright (C) 2007 EDIT

* European Distributed Institute of Taxonomy 

* http://www.e-taxonomy.eu

* 

* The contents of this file are subject to the Mozilla Public License Version 1.1

* See LICENSE.TXT at the top of this package for the full license terms.

*/

package eu.etaxonomy.cdm.print;

import java.io.File;

import java.util.ArrayList;

import java.util.Arrays;

import java.util.List;

import java.util.UUID;

import org.apache.logging.log4j.LogManager;import org.apache.logging.log4j.Logger;

import org.jdom.Element;

import org.junit.BeforeClass;

import org.junit.Ignore;

import eu.etaxonomy.cdm.print.out.IPublishOutputModule;

import eu.etaxonomy.cdm.print.out.mediawiki.MediawikiOutputModule;

import eu.etaxonomy.cdm.print.out.odf.OdfOutputModule;

/**

 * @author n.hoffmann

 * @since Apr 9, 2010

 * @version 1.0

 */

//@Ignore // Implement this test in a more generic way

public class PublisherTest {

	private static final Logger logger = LogManager.getLogger(PublisherTest.class);

	private static PublishConfigurator configurator; 

	private static Publisher publisher;

	private static IXMLEntityFactory factory;

	/**

	 * @throws java.lang.Exception

	 */

	@BeforeClass

	public static void setUpBeforeClass() throws Exception {

		configurator = PublishConfigurator.NewRemoteInstance();

//		configurator.setWebserviceUrl("http://localhost:8080/");

		configurator.setWebserviceUrl("http://dev.e-taxonomy.eu/cdmserver/flora_central_africa/");//central africa production

		//TODO

		//configurator.setWebserviceUrl("http://dev.e-taxonomy.eu/cdmserver/caryophyllales/");					

		//http://160.45.63.201/cdmserver/flora_central_africa

		//http://dev.e-taxonomy.eu/cdmserver/flora_central_africa/

		factory = configurator.getFactory();

		//setClassification();

		setTaxonNode();

		//TODO: How do we get the uuid for the feature tree from the classification or taxonNode without hardcoding it?

		//configurator.setFeatureTree(UUID.fromString("ac8d4e58-926d-4f81-ac77-cebdd295df7c"));//caryophyllales		

		//configurator.setFeatureTree(UUID.fromString("051d35ee-22f1-42d8-be07-9e9bfec5bcf7"));//Ericaceae

		configurator.setFeatureTree(UUID.fromString("051d35ee-22f1-42d8-be07-9e9bfec5bcf7"));

		//configurator.setFeatureTree(UUID.fromString("ae9615b8-bc60-4ed0-ad96-897f9226d568"));//ae9615b8-bc60-4ed0-ad96-897f9226d568 cichorieae

//		Element selectedTaxonNodeElement = new Element("TaxonNode");

//		configurator.addSelectedTaxonNodeElements(selectedTaxonNodeElement);		

		configurator.setExportFolder(new File("/home/sybille/tmp/"));

//		configurator.setExportFolder(new File("/Users/l.morris/Documents")); //TODO: use a relative path

	}

	private static void setTaxonNode() {

		//http://dev.e-taxonomy.eu/cdmserver/flora_central_africa/taxonNode/a605e87e-113e-4ebd-ad97-f086b734b4da

		//a95f7122-87c9-478b-a1e6-d9199d855356 agarista

		//taxonNodeUuid a605e87e-113e-4ebd-ad97-f086b734b4da FeatureTree UUID 051d35ee-22f1-42d8-be07-9e9bfec5bcf7

		//UUID taxonNodeUuid = UUID.fromString("be6566eb-4661-41fe-8ec2-caf885a12cbd");//5168a18b-c0b1-44cc-80aa-7a5572fefe04

		//UUID taxonNodeUuid = UUID.fromString("a605e87e-113e-4ebd-ad97-f086b734b4da");//Ericaceae

		UUID taxonNodeUuid = UUID.fromString("0044aae4-721b-4726-85ff-752a89cff748");//restionaceae

		//UUID taxonNodeUuid = UUID.fromString("6a7ac1ad-2fd9-4218-8132-12dd463d04b9");// cf74ab02-2385-4818-9d56-902fa3e6fe6b 4f6c68d0-63f2-4235-83c2-5bff14532f90 cichorieae.

		//restionaceae 0044aae4-721b-4726-85ff-752a89cff748

		//UUID taxonNodeUuid = UUID.fromString("9440bd28-b462-4112-8906-a643b7d3f195");//caryophyllales

		Element taxonNodeElement = factory.getTaxonNode(taxonNodeUuid);

		configurator.addSelectedTaxonNodeElements(taxonNodeElement);		

	}

	/*

	 * Adds all TaxonNodes from a classification to the PublishConfigurator. Only tested with the smaller database Caryophyllales. 

	 * To run the Publisher on a single TaxonNode e.g. family or genus, call setTaxonNode instead.

	 */

	private static void setClassification() {

		List<Element> classifications = configurator.getFactory().getClassifications();

		for(Element child : classifications){

			List<Element> children = child.getChildren();

			List<Element> elements = configurator.getFactory().getChildNodes(child);

			//for(Element child2 : children){

			//logger.warn("The element name is " + child2.getName() + " and value is " + child2.getValue());

			// 1. get the value where the child2.getName is uuid

			//}

			// 2. http://dev.e-taxonomy.eu/cdmserver/caryophyllales/portal/classification/9edc58b5-de3b-43aa-9f31-1ede7c009c2b/childNodes

			// 3. get the taxonNode uuid from the classification

			int count = 0;

			for(Element child2 : elements){

				logger.warn("2 The element name is " + child2.getName() + " and value is " + child2.getValue());

				// 1. get the value where the child2.getName is uuid

				logger.warn("3 The uuid is " + child2.getChildText("uuid")); 

				logger.warn("4 The uuid is " + child2.getChild("uuid")); 

				logger.warn("5 The count is " + count); 

				//filter out Fabales in FoCE - as it's huge and seems to cause the harvetsing to crash.

				if (child2.getChildText("uuid") == "94bb5507-201d-4e34-9aa7-dce58fcd6a25") {

					break;

				}

				//temporarily filter c15e12c1-6118-4929-aed0-b0cc90f5ab22 as it's causing a lazyInitializationException in caryophyllales

				if (child2.getChildText("uuid") == "c15e12c1-6118-4929-aed0-b0cc90f5ab22") {

					break;

				}

				UUID taxonNodeUuid = UUID.fromString(child2.getChildText("uuid"));

				Element taxonNodeElement = factory.getTaxonNode(taxonNodeUuid);

				configurator.addSelectedTaxonNodeElements(taxonNodeElement);

				count++;

			}

		}

	}

	/**

	 * Test method for {@link eu.etaxonomy.cdm.print.Publisher#publish()}.

	 */

//	@Ignore

	@Ignore

	public void testPublishXml() {

		List<IPublishOutputModule> modules = new ArrayList();

		//modules.add(new XMLOutputModule());

		modules.add(new MediawikiOutputModule(""));

		configurator.setOutputModules(modules);

		//configurator.setOutputModules(Arrays.asList(new IPublishOutputModule[]{new XMLOutputModule()}));

		logger.warn("The number of selected taxon node elements is........ " + configurator.getSelectedTaxonNodeElements().size());

		Publisher.publish(configurator);

	}

	@Ignore

	public void textPublishOdf() {

		configurator.setOutputModules(Arrays.asList(new IPublishOutputModule[]{new OdfOutputModule()}));

		Publisher.publish(configurator);

	}

}