EDIT

/**

* Copyright (C) 2007 EDIT

* European Distributed Institute of Taxonomy

* http://www.e-taxonomy.eu

*

* The contents of this file are subject to the Mozilla Public License Version 1.1

* See LICENSE.TXT at the top of this package for the full license terms.

*/

package eu.etaxonomy.cdm.model.occurrence;

import java.util.HashSet;

import java.util.Set;

import javax.persistence.Entity;

import javax.persistence.FetchType;

import javax.persistence.JoinColumn;

import javax.persistence.ManyToMany;

import javax.persistence.ManyToOne;

import javax.persistence.OneToMany;

import javax.xml.bind.annotation.XmlAccessType;

import javax.xml.bind.annotation.XmlAccessorType;

import javax.xml.bind.annotation.XmlElement;

import javax.xml.bind.annotation.XmlElementWrapper;

import javax.xml.bind.annotation.XmlIDREF;

import javax.xml.bind.annotation.XmlRootElement;

import javax.xml.bind.annotation.XmlSchemaType;

import javax.xml.bind.annotation.XmlType;

import org.apache.logging.log4j.LogManager;import org.apache.logging.log4j.Logger;

import org.hibernate.annotations.Cascade;

import org.hibernate.annotations.CascadeType;

import org.hibernate.envers.Audited;

import org.hibernate.search.annotations.IndexedEmbedded;

import eu.etaxonomy.cdm.model.agent.Institution;

import eu.etaxonomy.cdm.model.common.EventBase;

/**

 * @author a.mueller

 * @since 17.05.2010

 */

@XmlAccessorType(XmlAccessType.FIELD)

@XmlType(name = "DerivationEvent", propOrder = {

    "originals",

    "derivatives",

    "institution",

    "type"

})

@XmlRootElement(name = "DerivationEvent")

@Entity

//@Indexed disabled to reduce clutter in indexes, since this type is not used by any search

//@Indexed

@Audited

public class DerivationEvent extends EventBase {

	private static final long serialVersionUID = 3661673673962819395L;

	private static final Logger logger = LogManager.getLogger(DerivationEvent.class);

	@XmlElementWrapper(name = "Originals")

	@XmlElement(name = "Original")

	@XmlIDREF

	@XmlSchemaType(name = "IDREF")

	@Cascade({CascadeType.SAVE_UPDATE, CascadeType.MERGE})

	@ManyToMany(fetch = FetchType.LAZY,mappedBy="derivationEvents")

	@IndexedEmbedded(depth = 3)

	protected Set<SpecimenOrObservationBase> originals = new HashSet<>();

	@XmlElementWrapper(name = "Derivatives")

	@XmlElement(name = "Derivative")

	@XmlIDREF

	@XmlSchemaType(name = "IDREF")

	@OneToMany(fetch=FetchType.LAZY, mappedBy="derivedFrom")

	@Cascade({CascadeType.SAVE_UPDATE, CascadeType.MERGE})

	protected Set<DerivedUnit> derivatives = new HashSet<>();

	@XmlElement(name = "Institution")

	@XmlIDREF

	@XmlSchemaType(name = "IDREF")

	@ManyToOne(fetch = FetchType.LAZY)

	@IndexedEmbedded

	@Cascade({CascadeType.SAVE_UPDATE,CascadeType.MERGE})

	@JoinColumn(name="institution_id")

	private Institution institution;

	@XmlElement(name = "DerivationEventType")

    @XmlIDREF

    @XmlSchemaType(name = "IDREF")

    @ManyToOne(fetch = FetchType.LAZY)

	private DerivationEventType type;

// ********************* FACTORY  ****************************/

	/**

	 * Factory method

	 * @deprecated Use {@link #NewInstance(DerivationEventType)} or any other

	 * factory method instead to make sure,

	 * the derivation event type is always set.

	 */

	@Deprecated

	public static DerivationEvent NewInstance(){

		return new DerivationEvent();

	}

	// ********************* FACTORY  ****************************/

	/**

	 * Factory method

	 * @return

	 */

	public static DerivationEvent NewInstance(DerivationEventType type){

		DerivationEvent result = new DerivationEvent();

		result.setType(type);

		return result;

	}

	/**

	 * Factory method

	 */

	public static DerivationEvent NewSimpleInstance(SpecimenOrObservationBase original,

	        DerivedUnit derivative, DerivationEventType type){

		DerivationEvent result = NewInstance(type);

		result.addOriginal(original);

		result.addDerivative(derivative);

		return result;

	}

// ************************* CONSTRUCTOR ****************************/

	/**

	 * Constructor

	 */

	protected DerivationEvent() {

		super();

	}

// ********************* GETTER / SETTER / ADDER **********************/

	/**

	 * The specimen or observations that are the input for this derviation event.

	 * @return

	 */

	public Set<SpecimenOrObservationBase> getOriginals() {

		return originals;

	}

	/**

	 * Adds a new input specimen or observation for this derviation event.

	 * @see #getOriginals()

	 * @return

	 */

	public void addOriginal(SpecimenOrObservationBase original) {

		if (! this.originals.contains(original)){

			this.originals.add(original);

			original.addDerivationEvent(this);

		}

	}

	/**

	 * Removes an input specimen or observation for this derviation event.

	 * @see #getOriginals()

	 * @return

	 */

	public void removeOriginal(SpecimenOrObservationBase original) {

	    if (this.originals.contains(original)){

	        this.originals.remove(original);

	        original.removeDerivationEvent(this);

	    }

	}

	/**

	 * The specimen or observations that are the output for this derviation event.

	 * @return

	 */

	public Set<DerivedUnit> getDerivatives() {

		return derivatives;

	}

	/**

	 * Adds a new output specimen or observation for this derivation event.

	 * @see #getDerivatives()

	 * @return

	 */

	public void addDerivative(DerivedUnit derivative) {

		if (derivative != null){

			boolean notExisting = derivatives.add(derivative);

			if (notExisting){

				derivative.setDerivedFrom(this);

			}

		}

	}

	/**

	 * Removes an output specimen or observation for this derviation event.

	 * @see #getDerivatives()

	 * @return

	 */

	public void removeDerivative(DerivedUnit derivative) {

		if (derivative != null){

			derivative.setDerivedFrom(null);

		}

		derivatives.remove(derivative);

	}

    /**

     * #4498

     * @return

     */

    public Institution getInstitution() {

		return institution;

	}

	public void setInstitution(Institution institution) {

		this.institution = institution;

	}

	/**

	 * Returns the derivation event type

	 * @return

	 */

	public DerivationEventType getType() {

		return type;

	}

	public void setType(DerivationEventType type) {

		this.type = type;

	}

//*********** CLONE **********************************/

	/**

	 * Clones <i>this</i> derivation event. This is a shortcut that enables to

	 * create a new instance that differs only slightly from <i>this</i> derivation event

	 * by modifying only some of the attributes.<BR>

	 * This method overrides the clone method from {@link EventBase EventBase}.

	 *

	 * @see EventBase#clone()

	 * @see java.lang.Object#clone()

	 */

	@Override

	public DerivationEvent clone() throws CloneNotSupportedException {

		try{

			DerivationEvent result = (DerivationEvent)super.clone();

			//type

			result.setType(this.getType());

			//derivates

			result.derivatives = new HashSet<DerivedUnit>();

			for(DerivedUnit derivative : this.derivatives) {

				result.addDerivative(derivative);

			}

			//originals

			result.originals = new HashSet<>();

			for(SpecimenOrObservationBase<?> original : this.originals) {

				result.addOriginal(original);

			}

			//no changes to: -

			return result;

		} catch (CloneNotSupportedException e) {

			logger.warn("Object does not implement cloneable");

			e.printStackTrace();

			return null;

		}

	}

}