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/**
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* Copyright (C) 2007 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.cdm.model.description;
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import javax.persistence.Entity;
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import javax.persistence.FetchType;
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import javax.persistence.ManyToOne;
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import javax.xml.bind.annotation.XmlElement;
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import javax.xml.bind.annotation.XmlIDREF;
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import javax.xml.bind.annotation.XmlSchemaType;
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import javax.xml.bind.annotation.XmlType;
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import org.apache.logging.log4j.LogManager;import org.apache.logging.log4j.Logger;
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import org.hibernate.envers.Audited;
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import eu.etaxonomy.cdm.model.name.TaxonName;
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import eu.etaxonomy.cdm.model.reference.ICdmTarget;
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import eu.etaxonomy.cdm.model.reference.NamedSourceBase;
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import eu.etaxonomy.cdm.model.reference.OriginalSourceType;
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import eu.etaxonomy.cdm.model.reference.Reference;
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/**
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* This class represents an {@link eu.etaxonomy.cdm.model.reference.IOriginalSource IOriginalSource}
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* that can be used with {@link eu.etaxonomy.cdm.model.description.DescriptionElementBase description elements}.
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* Additionally to the core functionally of IOriginalSource a {@link eu.etaxonomy.cdm.model.name.TaxonName taxon name}
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* can be stored that points to the name used in the source. This is needed because description always belong
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* to accepted taxa while the referenced citations may use synonym names.
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* </BR>
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* The use of "originalNameString" within a DescriptionElementSource has to be discussed.
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* In general this string is to be used for different representations of the sourced object. In this classes
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* context it could also stand for the string representation of the taxon name used in the source. This
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* may make sense if the taxon name is not available in the CDM and the user for some reason does not want
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* to create a new ful {@link eu.etaxonomy.cdm.model.name.TaxonName taxon name}.
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*
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* @author a.mueller
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* @since 18.09.2009
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*/
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@XmlType(name = "DescriptionElementSource", propOrder = {
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"sourcedElement"
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})
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@Entity
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@Audited
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public class DescriptionElementSource extends NamedSourceBase{
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private static final long serialVersionUID = -8487673428764273806L;
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@SuppressWarnings("unused")
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private static final Logger logger = LogManager.getLogger(DescriptionElementSource.class);
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// ************************* FIELDS ********************************/
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@XmlElement(name = "sourcedElement")
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@XmlIDREF
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@XmlSchemaType(name = "IDREF")
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@ManyToOne(fetch = FetchType.LAZY)
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private DescriptionElementBase sourcedElement;
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//************************* FACTORY ******************************/
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public static DescriptionElementSource NewInstance(OriginalSourceType type){
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return new DescriptionElementSource(type);
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}
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public static DescriptionElementSource NewDataImportInstance(String id){
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DescriptionElementSource result = new DescriptionElementSource(OriginalSourceType.Import);
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result.setIdInSource(id);
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return result;
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}
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public static DescriptionElementSource NewDataImportInstance(String id, String idNamespace){
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DescriptionElementSource result = NewDataImportInstance(id);
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result.setIdNamespace(idNamespace);
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return result;
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}
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public static DescriptionElementSource NewDataImportInstance(String id, String idNamespace, Reference ref){
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DescriptionElementSource result = NewDataImportInstance(id, idNamespace);
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result.setCitation(ref);
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return result;
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}
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public static DescriptionElementSource NewInstance(OriginalSourceType type, String id, String idNamespace, Reference citation){
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DescriptionElementSource result = NewInstance(type);
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result.setIdInSource(id);
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result.setIdNamespace(idNamespace);
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result.setCitation(citation);
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return result;
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}
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public static DescriptionElementSource NewInstance(OriginalSourceType type, String id, String idNamespace, Reference citation, String microCitation){
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DescriptionElementSource result = NewInstance(type, id, idNamespace, citation);
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result.setCitationMicroReference(microCitation);
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return result;
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}
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public static DescriptionElementSource NewInstance(OriginalSourceType type, String id, String idNamespace, Reference citation, String microReference, TaxonName nameUsedInSource, String originalNameString){
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DescriptionElementSource result = NewInstance(type, id, idNamespace, citation, microReference);
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result.setNameUsedInSource(nameUsedInSource);
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result.setOriginalNameString(originalNameString);
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return result;
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}
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public static DescriptionElementSource NewInstance(OriginalSourceType type, String id, String idNamespace,
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Reference citation, String microReference, TaxonName nameUsedInSource, String originalNameString, ICdmTarget target){
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DescriptionElementSource result = NewInstance(type, id, idNamespace, citation, microReference, nameUsedInSource, originalNameString);
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result.setCdmSource(target);
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return result;
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}
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public static DescriptionElementSource NewAggregationInstance(ICdmTarget target){
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DescriptionElementSource result = NewInstance(OriginalSourceType.Aggregation);
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result.setCdmSource(target);
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return result;
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}
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public static DescriptionElementSource NewPrimarySourceInstance(Reference citation, String microCitation){
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DescriptionElementSource result = NewInstance(OriginalSourceType.PrimaryTaxonomicSource);
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result.setCitation(citation);
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result.setCitationMicroReference(microCitation);
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return result;
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}
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public static DescriptionElementSource NewPrimarySourceInstance(Reference citation, String microReference, TaxonName nameUsedInSource, String originalNameString){
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DescriptionElementSource result = NewPrimarySourceInstance(citation, microReference);
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result.setNameUsedInSource(nameUsedInSource);
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result.setOriginalNameString(originalNameString);
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return result;
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}
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//*********************** CONSTRUCTOR ******************************/
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//for hibernate use only
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/**
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* @deprecated for internal use only
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*/
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@Deprecated
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protected DescriptionElementSource(){
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}
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private DescriptionElementSource(OriginalSourceType type){
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super(type);
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}
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//***************** GETTER / SETTER ****************************/
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public DescriptionElementBase getSourcedElement() {
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return sourcedElement;
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}
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public void setSourcedElement(DescriptionElementBase sourcedElement) {
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if (this.sourcedElement != sourcedElement){
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this.sourcedElement = sourcedElement;
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if (sourcedElement != null){
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sourcedElement.addSource(this);
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}
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}
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}
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//*********************************** CLONE *********************************************************/
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@Override
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public DescriptionElementSource clone() throws CloneNotSupportedException{
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DescriptionElementSource result = (DescriptionElementSource)super.clone();
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//we don't expect the source to belong to the same description element
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result.sourcedElement = null;
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//no changes
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return result;
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}
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}
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