EDIT

/**

* Copyright (C) 2007 EDIT

* European Distributed Institute of Taxonomy 

* http://www.e-taxonomy.eu

* 

* The contents of this file are subject to the Mozilla Public License Version 1.1

* See LICENSE.TXT at the top of this package for the full license terms.

*/

package eu.etaxonomy.cdm.test.function;

import java.util.Calendar;

import java.util.Set;

import javax.activation.MimeType;

import org.apache.log4j.Logger;

import eu.etaxonomy.cdm.model.agent.Agent;

import eu.etaxonomy.cdm.model.agent.Institution;

import eu.etaxonomy.cdm.model.agent.Person;

import eu.etaxonomy.cdm.model.common.Annotation;

import eu.etaxonomy.cdm.model.common.Language;

import eu.etaxonomy.cdm.model.common.OriginalSource;

import eu.etaxonomy.cdm.model.location.NamedArea;

import eu.etaxonomy.cdm.model.location.NamedAreaType;

import eu.etaxonomy.cdm.model.location.WaterbodyOrCountry;

import eu.etaxonomy.cdm.model.media.Media;

import eu.etaxonomy.cdm.model.media.MediaInstance;

import eu.etaxonomy.cdm.model.name.BotanicalName;

import eu.etaxonomy.cdm.model.occurrence.Collection;

import eu.etaxonomy.cdm.model.occurrence.DerivationEvent;

import eu.etaxonomy.cdm.model.occurrence.DerivationEventType;

import eu.etaxonomy.cdm.model.occurrence.DeterminationEvent;

import eu.etaxonomy.cdm.model.occurrence.FieldObservation;

import eu.etaxonomy.cdm.model.occurrence.GatheringEvent;

import eu.etaxonomy.cdm.model.occurrence.Observation;

import eu.etaxonomy.cdm.model.occurrence.Specimen;

import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;

import eu.etaxonomy.cdm.model.reference.Database;

import eu.etaxonomy.cdm.model.reference.ReferenceBase;

import eu.etaxonomy.cdm.model.taxon.Taxon;

import eu.etaxonomy.cdm.strategy.parser.TaxonNameParserBotanicalNameImpl;

/**

 * @author AM

 * @created 09.05.2008

 * @version 1.0

 */

public class TestSpecimen {

	private static final Logger logger = Logger.getLogger(TestSpecimen.class);

	public void testSpecimen(){

		logger.info("Create test taxon ...");

		ReferenceBase sec = Database.NewInstance();

		String fullNameString = "Acanthostyles saucechicoensis (Hieron.) R.M. King & H. Rob.";

		BotanicalName botanicalName = TaxonNameParserBotanicalNameImpl.NewInstance().parseFullName(fullNameString);

		Taxon taxon = Taxon.NewInstance(botanicalName, sec);

		Collection collection = Collection.NewInstance();

		String collectionCode = "ABCDE";

		collection.setCode(collectionCode);

		Institution institution = Institution.NewInstance();

		String institutionCode = "Inst444";

		institution.setCode(institutionCode);

		collection.setInstitute(institution);

		logger.info("Create determination event");

		DeterminationEvent determinationEvent = DeterminationEvent.NewInstance();

		determinationEvent.setTaxon(taxon);

		Person actor = Person.NewTitledInstance("J. M?ller (JE)");

		determinationEvent.setActor(actor);

		logger.info("Create gathering event");

		GatheringEvent gatheringEvent = GatheringEvent.NewInstance();

		Agent gatherer = Person.NewTitledInstance("Lorentz,P.G. s.n.");

		gatheringEvent.setActor(gatherer);

		Calendar gatheringDate = Calendar.getInstance();

		int year = 1922;

		int month = 10;

		int date = 05;

		gatheringDate.set(year, month, date);

		gatheringEvent.setGatheringDate(gatheringDate);

		logger.info("Create locality");

		NamedArea namedArea = NamedArea.NewInstance();

		WaterbodyOrCountry country = WaterbodyOrCountry.ARGENTINA_ARGENTINE_REPUBLIC();

		namedArea.addWaterbodyOrCountry(country);

		namedArea.setType(NamedAreaType.ADMINISTRATION_AREA());

		// XX

		gatheringEvent.setCollectingArea(namedArea);

		String localityString = "Sierras Pampeanas, Sauce Chico";

		gatheringEvent.setLocality(localityString);

		logger.info("Create new specimen ...");

		Specimen specimen = Specimen.NewInstance();

		specimen.setCatalogNumber("JE 00004506");

		specimen.setStoredUnder(botanicalName);   //??

		specimen.setCollection(collection);

		String annotation = "originally designated as type specimen 2000, but corrected 2005-11";

		specimen.addAnnotation(Annotation.NewDefaultLanguageInstance(annotation));

		Media media = Media.NewInstance();

		String uri = "http://131.130.131.9/database/img/imgBrowser.php?ID=50599";

		String mimeType = null;

		Integer size = null;

		MediaInstance mediaInstance = MediaInstance.NewInstance(uri, mimeType, size);

		media.addInstance(mediaInstance);

		specimen.addMedia(media);

		//Original ID

		OriginalSource source = OriginalSource.NewInstance();

		String id = "22";

		source.setIdInSource(id);

		specimen.addSource(source);

		FieldObservation fieldObservation = FieldObservation.NewInstance();

		DerivationEvent derivationEvent = DerivationEvent.NewInstance();

		derivationEvent.addDerivative(specimen);

		derivationEvent.setType(DerivationEventType.GATHERING_IN_SITU());

		fieldObservation.addDerivationEvent(derivationEvent);

		fieldObservation.setGatheringEvent(gatheringEvent);

		//type information

		//typified by

		logger.warn("Specimen: " + specimen);

		DerivationEvent dEvent = specimen.getDerivedFrom();

		logger.warn("DerivationEvent: " + dEvent);

		Set<SpecimenOrObservationBase> originals = dEvent.getOriginals();

		logger.warn("Originals: " + originals);

		for (SpecimenOrObservationBase original : originals){

			if (original instanceof FieldObservation){

				FieldObservation fieldObservation2 = (FieldObservation)original;

				logger.warn("FieldObservation: " + fieldObservation2);

				GatheringEvent gatheringEvent2= fieldObservation2.getGatheringEvent();

				logger.warn("GatheringEvent: " + gatheringEvent2);

				Agent gatherer2 = gatheringEvent2.getCollector();

				logger.warn("Gatherer: "+  gatherer2);

			}

		}

	}

	private void test(){

		System.out.println("Start ...");

		this.testSpecimen();

		System.out.println("\nEnd ...");

	}

	/**

	 * @param args

	 */

	public static void  main(String[] args) {

		TestSpecimen sc = new TestSpecimen();

    	sc.test();

	}

}