EDIT

Try to fix pattern issue in taxon uuidAndTitleCache search

Simplify taxonDao

refactoring NodeSortMode

Fix bug in TaxonDaoHibernateImpl

minor

minor

add limit and pattern to the uuid and titlecache methods

add limit and pattern to getTaxonNodeUuidAndTitleCacheOfAcceptedTaxaByClassification

Fix botanical name parsing species with infrageneric epithet #5881

Adding test for formatting species with infrageneric epi #5881

Implement parser for parsing species with infrageneric epithet #5881

Clean up

Fix NPE in TermIdInVocabularyComparator

add TermIdInVocabularyComparator

#5858 adding missing join fetch in AutoPropertyInitializer

Further develop the CDM preferences #3958

Set java code level to 1.7 in cdmlib

fix CubaCondensedStringComposer

#5859 avoiding pollution of the log file with stack traces

#4410 removing default status finally also from the distribution map query parameter code

Updating develop poms back to pre merge state

Merge branch 'master' into develop

Updating develop poms to hotfix version to avoid merge conflicts

Merge branch 'hotfix/4.1.1'

updating poms for branch'hotfix/4.1.1' with non-snapshot versions

First step to combine Distribution Composers

Add generic find(clazz, uuid) method #5853

Fill empty titleCache only during save and improve classification titleCache generation #5849

Revert class not found exception in referencing objects to pure logging.

updating poms for 4.1.1 branch with snapshot versions

Cleanup homotypicGroupComparator

minor

Cleanup getReferencingObjects

Add data source name to CdmSourceException #5785

Cleanup

fix NPE of Caryophyllales output test

Updating develop poms back to pre merge state

Merge branch 'master' into develop

updating develop poms to master versions to avoid merge conflicts

Merge branch 'release/4.1.0'

updating poms for branch'release/4.1.0' with non-snapshot versions

updating poms for 4.2.0-SNAPSHOT development

Reflect missing name taxon cache strategies #5838

Fix empty secMicroReference #5766

getTitleWithoutYearAndAuthor as Generic for all Non-NomRefs #5833

Fix failing inReference cache reset #1815

minor

Add getCacheStrategy to IReference #5833

revert last commit

minor

minor

Further cleanup and rename new default cache strategy to default cache strategy #5833

Remove all old reference cache strategies completely #5833

Further clean up reference cache strategies #5833

Some further cleaning up for single reference cache strategy #5833

Implement single cache strategy for references #5833

• Implemented new class NewDefaultReferenceCacheStrategy and helper class TitleWithoutYearAndAuthorHelper
• Moved all functionality of old ReferenceCacheStrategies to new class(es)
• Moved all old strategies to package .old...

smaller changes in TaxonNode

Implement isOrphaned() #5824

Synonym counts as orphaned if all of the accepted taxa are orphaned

Show stable identifier in specimen page (if present) #5515

Remove generics from Reference itself (may lead to compile errors in TaxEditor and Vaadin) #5830

Remove generics from Reference in cdmlib (except for cdmlib-model) #5830

Remove generics from Reference in cdmlib-model #5830

Javadoc

new method to get UuidAndTitleCache objects with nomenclatural
titleCache for teamOrPersonBase

Set failing SecurityTest to ignore #5829

Handle empty result for titleCache generation #5763

Inline Country term to avoid NPE #5765

fix polytomouskey delete, if root node is null

Add preferred stable URI to Derived Unit Facade #5765

Add secundum micro reference to cache strategy #5767

Add jaxb annotation for reverse representation #5815

Remove indexing from reverse feature representation #5815

Define column name for feature inverse representation #5815

Move factory methods up (Feature)

Move static constants to top (Feature)

Add inverse representation to feature #5815

Add getter/setter for secMicroReference #5717

remove sortFieldOptions (old lucene)

fix delete of polytomous keys

Move other invalid names to the end #5794

Fix possible class cast exception for collections of features #5780

Update symbols for PresenceAbsenceTerms in csv files #5777

Remove hierachy information from PresenceAbsenceTerm csv as it will not
be used.

minor

Add first version of cdmlib-db #5751

Change serial version id for identifiable entity and other minor issues

Fix empty protected titlecaches #5763

Adapt reusability of Credits / Rights

Adapt clone method for credits and rights to be consistent with JPA
mapping (not reusable).

Updating develop poms back to pre merge state

Merge branch 'master' into develop

updating develop poms to master versions to avoid merge conflicts

Merge branch 'release/4.0.0'

updating poms for branch'release/4.0.0' with non-snapshot versions

Cleanup MediaRepresentationPart and PolytomousKeyNode #5756

Fix failing test for DescriptionUtility

Remove cascading to terms #5755

minor

Add orphanRemoval to RelationshipTermBase.inverseRepresentation

Same exists for TermBase.representation so we have consistent behavior
now. Also it makes sense as inverse Representations can not stand alone.

Remove cascade from term to vocabulary #5754