small changes for moving taxonnodes
#5482 web services now support different orderBy modes
revert a small change in taxonservice
improve delete configurator for taxa and synonyms
Update test H2 after model update to 4.0
Remove method agentsUsedAsUsers related to #5743
minor
Remove bidirectionality for supplemental data #5743
Add test for bidirectional supplemental data #5743
Clean up AnnotationDao and AnnotationService
Update test data for xxxObj_type #3701
Adapt table and column names to hibernate 5 naming strategy #5369
... and some other changes to table/attribute names
Remove Autoincrement on AuditEvent.revisionnumber on MySQL #5718
Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
smaller changes for fauna europaea import and csvNameExport
Fix order for areas #5677
Fix potential NPE
Reload type designation before deleting it to avoid caching conflicts.
Fix compilation error for Distribution comparator #5677
Implement natural ordering for distributions in data portal #5677
fix move taxonnode and remove null values from childrenlists in several places
Add IEventBaseService to application controller #5403
Adapt test to service method changes
Also return all specimens belonging to sub classes when specifying SpecimenOrObservationBase as type
Add uuid based method for deleting type designations #5490
TaxonNodeByNameComparator is not a component anymore and add configurable delete method for media
fix move synonym to another accepted taxon
Update cdmlib version from 3.13.0-SNAPSHOT to 4.0.0-SNAPSHOT
Refactor associated taxa assembly to include uuid #5611
workaround for delete of polytomous keynodes, because of null values in children list
removing all (almost all) spy6 references and dependencies
cosmetics
Fix for DnaSample relation to Identifier, Annotations, etc.
Fix failing test
Fix et al. for collectors #5568
Adjust specimen delete configurator
Add missing Transactional annotation to delete method
Fix CCE in DefinedTermDaoImpl.getPartOf (#5556) and make deproxy more generic
Merge branch 'hotfix/3.12.4' into develop
Conflicts: cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/facade/DerivedUnitFacadeCacheStrategyInjectionTest.java cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/facade/DerivedUnitFacadeCacheStrategyInjectionTest.xml
updating poms for branch'hotfix/3.12.4' with non-snapshot versions
Fix strategy injection test
Fix test for cache strategy loading
Fix javassist error for specimen cache strategy loading #5545
updating poms for 3.12.4 branch with snapshot versions
Merge branch 'hotfix/3.12.3' into develop
Conflicts: cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/TaxonNodeServiceImpl.java cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/TaxonServiceSearchTest.java
updating poms for branch'hotfix/3.12.3' with non-snapshot versions
Implement preliminary Specimen cache strategy using facade cache strategy
adapt test for searching for name without taxon
Revert last commit (taxon node handling is done in taxeditor)
Fix potential NPE when creating a new taxon for a classfication
cherry pick from develeop
new createNewTaxonNode service method
Fix specimen retrieval by assignment status
updating poms for 3.12.3 branch with snapshot versions
Cleanup CdmTermCacher and CdmCacher
Fix failing test in cdmlib-services
Use correct StringUtils class
Fix NPE in DistributionNodeByAreaLabelComparator
#5477 circumventing bug that broke test and creating nwe test to reproduce the issue
Add assignmentStatus as parameter to occurrence retrieval in service method
updating poms for branch'hotfix/3.12.2' with non-snapshot versions
turing of debug logging
#4962 using LEFT FETCH JOIN for ranks and sec fixed problems and improves performance
updating poms for 3.12.2 branch with snapshot versions
fixing project versions
updating poms for 3.12.1 branch with snapshot versions
Update dependencies to the latest versions (except for lucene) #4716
fixing problems regarding lucene search after merge - one test still failing
resolving conflicts after merge of ticket_4716 into develop
Updating develop poms back to pre merge state
updating develop poms to master versions to avoid merge conflicts
updating poms for branch'release/3.12.0' with non-snapshot versions
updating poms for 3.13.0-SNAPSHOT development
avoiding NPEs in pager
Cleanup description generics (related to #5357)
add null check for delete and minor
organizing imports
#4716 reduicing clutter in the lucene index and solving performance problems which probably fixes #4277 and #3663
Generalize term service method listByTermType()
#4761 performance improvent of massindexer by using new hibernate 5 massindexer, speedup by 3x
#4761 avoiding deprecations in highlighter api
#4761 updating means to obtain the IndexManager to new hibernate search api and extending according test
#4761 TopDocs adapting to removed IndexSearcher.setDefaultFieldSortScoring(boolean, boolean) method
#4761 TopDocs now supports maxScore, so TopGroupsWithMaxScore has become obsolete
#4761 correcting usage of new paramaters joinQuery parameters ScoreMode and multipleValuesPerDocument
#4761 fixing broken area filter join query, by circumventing a bug in lucene LUCENE-4824 (numeric fields not supported in join queries)
#4716 fixing proplems with testdata by making use of the CleanSweepInsertLoadStrategy.class