EDIT

ref #7709 fixing missing runAsAuthenticator for RunAsAdmin, TaxonGraphHibernateListener and test

ref #7648 free configurable TaxonGraphHibernateListener ready

fixing usage of wrong logger in RunAsAuthenticator

make authenticationManager lazy to avoid circals during start up

cleanup and remove rows(xxx) method

fix #7405 Rename WorkingSet to DescriptiveDataSet

add new longRunningTasksService for monitored operations

ref #6241 replaced @created by @since in cdmlib

ref #6241 change @date to @since (fix)

ref #6241 change @date to @since

ref #7150 implementing CollectionVoter and adding new default PermissionGroup 'EditorExtendedCreate'

typos and whitespace

reducing log level

ref #6867 public access to RunAsAuthenticator methods

ref #7018 ref #7016 turning the not needed TypeDesignationVoter into a SpecimenOrObservationBaseVoter

ref #7016 implementing TypeDesignationVoter and more robust permissions:

• avoiding string based cdm authorities
• full test set for CdmPermissionClass

fix #6880 allow explicitly define hibernate configurations in applicationController

• e.g. switch of auditing for long running imports

cleanup

fix #6856 adding group Admin to FirstDataInserter

ref #6852 introducing a DummyDataInserter to be used instead of null

ref #6852 RunAsAuthenticator as abstract base class for all data inserters

cleanup

ref #6169 adding getService() method to CdmRepository

fix #6368 rename table and class TaxonNameBase

whitespace

Merge branch 'develop' into feature/cdm-4.7

Conflicts:
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/distribution/excelupdate/ExcelDistributionUpdate.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/MnTableCreator.java

#6612 dao and service classes for the Registration class

• service implementation incomplete

adapt GrantedAuthorityImpl factory method

ref #6419 update bean name in CdmApplicationController

provide the new IRightsService in service layer

Cleanup

ref #6419 renaming ICdmApplicationDefaultConfiguration to ICdmRepository

fix #6419 renaming CdmApplicationDefaultConfiguration to CdmRepository

emall fix for selection of reference as inreference

ref #6190 removing svn property place holder in first line of code - java files

ref #6190 removing svn property place holder in first line of code

ref #5969: add PreferenceService to applicationController

Add IEventBaseService to application controller #5403

Upgrade to hibernate 5 with persistence tests running #4716

#5000 Add new metadata service

#5297 Refactor ProgressMonitorController, Add Remoting Progress monitor

#5297 Add progress monitor service, Add test services

#5297 Add monit import method

#5297 Update no. of work units

#5297 Add new thread class for remoting monitors

#5297 Add owner field to monitor thread and user checks in service...

Minor cleanup

Add annotation service to application config

Add publisher role uuid and clean up FirstDataInserter #3979

merge validation2 and model 3.5 into trunk

merge cdmlib-service from validation branch to trunk

adding temprary workaround for implementing remote controller

• bundled services for molecular data in one package
  • added more tests

• added IAmplificationService and ISequenceService
  • added service methods to move derivates from one to another
  • added test for move method

• added IPrimerService and IPrimerDao with the corresponding implementations
  • interface supports the retrieval of UuidAndTitleCache lists for all primers in the DB

adapting default permission goups according to #4111 (behaviour of TaxonEditor for users with limited grants [DISCUSS]) comment 8

implementing #4082 (implement default permission groups)

CdmApplicationDefaultConfiguration : refactoring autowiring for datasource to allow for remoting

CdmApplicationDefaultConfiguration : moved autowiring for sessionFactory and transactionManager from members to set functions
to allow for remoting
CdmApplicationController : catching UnsupportedOperationException for database service call to allow for remoting...

reverting back the cdm application configuration refatoring

refactoring cdm application configuration / controller to allow for remoting

introducting ICdmPermissionEvaluator

change version ->3.3.0, move CdmMetaData, change schema version -> 20130924, fix TaxonServiceSearch test, update update-script

minor

missing @Overrides

add authentication to ICdmAppController

central configuration of admin login and default password in eu.etaxonomy.cdm.config.Configuration - (missing bit)

central configuration of admin login and default password in eu.etaxonomy.cdm.config.Configuration

Hibernate 4 migration. All test running except for SDDImport (Out of memory)

update some further dependencies

first implementation of TransmissionEngineOccurrence and basic test

fixing problem with run-as authentication

fixing FirestDataInterter for non security contexts

using run-as authentication in firstDataInserter

modifying FirstDataInserter for existing tests

more genric way to insert first data (metadata, admin, ROLE_ADMIN)

checking for admins role ROLE_ADMIN during startup of CdmApplicationController

fixing #3133 (security: Role, CdmAuthority and GrantedAuthorityImpl implement GrantedAuthority)

fixing #3133

introducing enum for Roles

move save for admin

adding authority to first user admin

implementing GrantedAuthorityService for #2990 (implement missing parts of Groups admin details view)

preparations for secutity implementation in taxeditor ApplicationController

fixing #3094 (security: make PermissionEvaluator and/or methods available via ApplicationController) & also removing hasPermission() from IService

enable omit termloading again

bugfix for failing compile, throw datassource not found

bugfix for IOApplicatonControler static methods

bugfix for IOApplicatonControler static methods

handle progress cancellation and step names

remove CancelException and use java.util.concurrent.CancellationException instead

move progress monitoring into subpackage and add CancelException

add appImport applicationContext (add common monitors)

improved monitoring for application controller

application controller loading IoApplicationContext instead of DefaultApplicationContext

use uuid for missing term check

remove imports

Change default password to 5 digits

Use interface type for get/setCdmAppController in CdmDefaultIOBase (#2347)

added getPolytomousKeyNodeService to application controller interface

Created a new service to handle group related stuff. The old implementation in UserService is still available but deprecated.

minor changes to progress monitor call locations