EDIT

organizing imports

Fix issues after rebase #4716

whitespace

adding lsid to TaxonInformation

removed references to vaadin in pom file
removed vaadin classes as they have been migrated to cdm-vaadin project

merge PresenceTerm and AbsenceTerm #4521

latest changes for VaadinPrototype

• paged tables
• lazy loaded container
• crud functionality for distribution status
• classification selection view
• named area selection view

removed deprecated mortbay logger in MediaController not only because it is deprecated but also because of conflicts with vaadin framework

clean up

minor

OccurrenceCatalogueController : added check for uuid corresponding to accepted taxon
OccurrenceSearch : updated terms to be consistent
occurrence-catalogue-default : updated doc

DerivedUnitFacade : added getRights method
OccurrenceCatalogueController : maintenance , clean up and added sources and rights to the init facade strategy
OccurrenceSearch : reverted back code for specimen related information

updated controller and search to optimise the code for retrieving all occurrences.
added apt doc for endpoint

Changed project scpecific naming to a more generic one.

Changed project scpecific naming to a more generic one.

add occurrence controler for the occurrence web-service

cleaned unused imports

restructering vaadin package -- new view

remote.xml : added simple rdf marshaller (named rdfMarshaller) for the web service rdf responses
RdfViewTest, OaiPmhViewTest : changed SpringBeanByType annotation to SpringBeanByName since we have now two marshallers (remote.xml)
RdfView, XmlView, OaiPmhResponseView : added qualifier for autowired marshaller since we now have two marshallers (remote.xml)...

NameInformationTest : sample test file for name information test in RdfViewTest
rdf-views.xml: new view configuration for rdf view
NameInformationRdf : new rdf class corresponding to NameInformation

NameCatalogueController : updated controller to improve exact and fuzzy name search to use lucene document only searches
NameSearch : updated dto to accomodate lucene documents

minor

NameCatalogueController : added 'fuzzy' endpoint to perform fuzzy matching on names
NameSearch : updated NameSearch dto to include similarity score

Added a new Controller and DTO classes to create a flattened structure for presentation of Polytomous keys.

new dto for accepted namesearch endpoint in the name catalogue controller

Added DTO classes for returning a flat data structure for displaying each row of a Polytomous key in linked style.

Added source dataset and taxonomic scrutiny elements to dto and updated calls in the controller to handle new elements

Updated to remove calls to getRelatedFrom / getRelatedTo .
Other indirect, transient methods in NameRelationship, TaxonRelationship and SynonymRelationship have been used.

added name and rank in taxon web service response

• updated name search web service to change 'taxonUuids' to 'taxonConceptUuids' and added a new accepted taxon uuid list called 'acceptedTaxonUuids' which contains the accepted taxon uuids of the taxon uuids in the 'taxonConceptUuids' list.
• added 'classification' parameter to the taxon web service to choose which classification is tob returned....

updated controller and related dtos to,

• add name cache search feature
• correct relationship type representation

Removed console outputs and added check for NameInformation response to add taxon lsids only in the case of accepted taxa

updated import of RemoteResponse and ErrorResponse classes

RemoteResponse : Root interface for response model enities. This makes it possible to return a list of different objects (all implementing RemoteResponse)

ErrorResponse : Basic mode entity class which contains an error message

New package which contains dtos for name_catalogue queries

• NameSearch for basic name search using string pattern
• NameInformation for name search based on name uuids
• TaxonInformation for taxon search based on taxon uuids

add on to #2340 (converter is no longer needed)

bugfix for LsidToUri Converter, works with real URIs now

moving TaggedText generation into model.strategy

OAI-PMH improvement and more

merge 3.0.2 to trunk

improved dwc mapping

updating to dozer 5.3.0 & mapping to DarwinCore Simple

using full implementation of SimpleDarwinRecord & clean up of SRUWrapper WebService

fixing namespaces

re-integrating branches/cdmlib/oai-pmh up to revision 10059

merging /branches/cdmlib/SPRINT-Chichorieae1/ to trunk

merge cate-development2 branch with trunk

minor fixes

First pass implementation of an OAI-PMH Controller for identifiable objects

Improvements to CDM-to-RDF mapping, plus Species Profile Model mappings from cdm descriptions

removing deprecated DTOs

minimum base web services for CDM Portal v2.0

TypeDesignationStatus renamed to SpecimenTypeDesignationStatus

large number of changes relating to new architecture & svn keyword property Id added

minor

large number of changes relating to new architecture

Merged branches/cdmlib/2.0 changes r5130:5370 into the trunk

License notice added

Fixed bug in cdm-remote caused by changes to createdBy and updatedBy (#634)

Committing large number of changes relating to versioning implementation (#108) + lsid resolution service implementation

Replacement of getPreferredLanguageString() method by get() after changes made to the 'title' field of the Media class

reverting modifications made from r4651 to r4654 by applying the patch:
svn diff -r 4654:4651 http://dev.e-taxonomy.eu/svn/trunk/cdmlib/
(one minor bug has been left out)

Generics type parameter fix.

refactoring of homotypicTaxonGroup to cope with unknown synonymy

changes affected by geoservice refactoring

added geoserviceUrlParameters to webservice

remote geoService

LocalisedTermAssembler Doku

Removed parameter CdmApplicationController from invoke() Interface method and retrieve it from import configurator instead.

added distribution services to description assembler

webservice now outputs a geoservice url

update annotations in webservice

resolved #415

fix sorting of !MediaRepresentations

fixed some issues with TypeDesignations and NameRelations

fixed paging

Refactoring DescriptionElements and Media

Features and FeatureTrees may be queried from webservice

Display references for type designations

CLOSED - #360: DIPTERA type information for synonymous genera is missing

CLOSED - #358: DIPTERA orthographic variants are not shown in dataportal

CLOSED - #383: CICHORIEAE Incorrect references

CLOSED - #368: DIPTERA unidentified taxa should have a "sp."

Fixed display of !NameTypeDesignations for accepted names and started refactoring !NameTypeDesignations and !SpecimenTypeDesignations. #360

switched to featureTree implementation for displaying descriptions

media DTOs and Assemblers working

mediaDTOs and Assemblers adapted to new media model

Merged branch cdm-webservices/cdmlib-remote r2565:r2624 into the trunk