EDIT

#5858 adding missing join fetch in AutoPropertyInitializer

Further develop the CDM preferences #3958

Merge branch 'master' into develop

Add generic find(clazz, uuid) method #5853

Fill empty titleCache only during save and improve classification titleCache generation #5849

Revert class not found exception in referencing objects to pure logging.

Cleanup getReferencingObjects

Add data source name to CdmSourceException #5785

Cleanup

minor

revert last commit

minor

Further cleanup and rename new default cache strategy to default cache strategy #5833

Implement single cache strategy for references #5833

• Implemented new class NewDefaultReferenceCacheStrategy and helper class TitleWithoutYearAndAuthorHelper
• Moved all functionality of old ReferenceCacheStrategies to new class(es)
• Moved all old strategies to package .old...

Remove generics from Reference in cdmlib (except for cdmlib-model) #5830

new method to get UuidAndTitleCache objects with nomenclatural
titleCache for teamOrPersonBase

Fix possible class cast exception for collections of features #5780

Change serial version id for identifiable entity and other minor issues

Fix empty protected titlecaches #5763

Adapt reusability of Credits / Rights

Remove method agentsUsedAsUsers related to #5743

Add getter/setter/termloader for (inverse)symbol, fix update script
#5734

Fix revisionnumber update for PostgreSQL #5718

Remove not null constraint from revisionnumber schema updater #5718

We need a contraint adder later.

Remove bidirectionality for supplemental data #5743

Clean up AnnotationDao and AnnotationService

Increase length of symbol and inverseSymbol #5734

Update test data for xxxObj_type #3701

Change reverseSymbol to inverseSymbol #5734

Adapt AnnotationDaoTest #3701

Update script for upading xxxObj_type #3701

Add symbol and reverseSymbol do DefinedTermBase #5734

Adapt table and column names to hibernate 5 naming strategy #5369

... and some other changes to table/attribute names

Remove Autoincrement on AuditEvent.revisionnumber on MySQL #5718

• Not yet tested for H2 and PostGreSQL

Add secMicroReference #5717

Add preferred stable URI to SpecimenOrObservation #5606

Add base structure for model update to 4.0

#5482 web services now support different orderBy modes

minor

minor

Add missing type information to UuidAndTitleCache object for search
results #5700

• fixes NPE

fix #5672

smaller changes for fauna europaea import and csvNameExport

Also return all specimens belonging to sub classes when specifying
SpecimenOrObservationBase as type

minor

Add IntextReference to related objects test classes

Javadoc

Fix deduplication problem with list order #5652

minor

TaxonNodeByNameComparator is not a component anymore and add configurable delete method for media

removing all (almost all) spy6 references and dependencies

Preliminary add tableGeneratorGlobalOverride to all session factories
again #4716 ()

see also r27338 and r27330

like before

Move TableGenerator(GlobalOverride) from test to persistence #4716

removing tableGeneratorOverride from non testing application contexts

Add separator after nom status in taxon titleCache #5576

Revert "#5563 fixed by avoiding access to null FeatureNodes"

This reverts commit cabfc584dd026a8c139b837af01af786bb619bed.

#5563 fixed by avoiding access to null FeatureNodes

Fix CCE in DefinedTermDaoImpl.getPartOf (#5556) and make deproxy more
generic

Merge branch 'hotfix/3.12.3' into develop

Conflicts:
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/TaxonNodeServiceImpl.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/TaxonServiceSearchTest.java

fix #5538

check for empty excludeUuid list

Minor

Handle AuditEvent hibernate sequence update in CdmUpdater correctly
#4716

Adapt log4j.properties to hibernate deprecated logging problem

Change logging error to info

#4962 using LEFT FETCH JOIN for ranks and sec fixed problems and improves performance

Update to lucene 5.4 and some minor dependency updates

Update dependencies to the latest versions (except for lucene) #4716

fixing problems regarding lucene search after merge - one test still failing

resolving conflicts after merge of ticket_4716 into develop

Add PostGreSQL to Source class and clean up PostgreSQL DatabaseType

Cleanup description generics (related to #5357)

revert the commit of the renamed deletelistener

add null check for delete and minor

minor for #5391

organizing imports

#4716 reduicing clutter in the lucene index and solving performance problems which probably fixes #4277 and #3663

Generalize term service method listByTermType()

changes for #4960 and #4959

#4716 IndexDocValue relates issues solved, indexing now without exceptions, most tests in TaxonServiceSearchTest successful

disabling unnecesary component scan

add LIKE to MatchMode #5391

Fix upgrade issues after rebase #4716

Fix issues after rebase #4716

migrate to hibernate 5 for cdmlib-services and cdmlib-ext #4716

• (except for hibernate search tests)
• including new spring-config structure

Adapt cdmlib-persistence to new testing architecture #5370

Upgrade to hibernate 5 with persistence tests running #4716

Fix all compile errors from services to remote (some only preliminary)
#4716

Further adapt to new jackson and new lucene version #4716

Fix bug for embeddable classes in AdvancedBeanInitializer #5383

#4313 implementing full stack of methods to expose TaxonNodeAgentRelations via remote controllers

Upgrade to spring 4.2.2, spring-security 4.0.2 and latest hibernate
validator #4716 and #4702

#4962 commenting performance measure print-out via System.err

#4962 avoiding bean initialization in getChildNodesAtRank() as much as possible - performance improvement

revert chamges in MatchMode

revert chamges in MatchMode

Fix typo

#4313 relationship type as additinal filter option for TaxonNodeAgentRelation services

Add new service method listDerminationEvents to occurrence service which
lists all determination events that contain the given specimen