EDIT

migrate to hibernate 5 for cdmlib-services and cdmlib-ext #4716

• (except for hibernate search tests)
• including new spring-config structure

Adapt cdmlib-persistence to new testing architecture #5370

Add to clear DB script

Fix ignored test in TaxonDaoHibernateImplTest #2815

cleanup dataset

more getters/adders, update script, vocabulary and test vocabulary for TaxonNodeAgentRelation #3583

Simplify table structure for CategoricalData-StateData and and QuantitativeData_StatisticalMeasurementValue #4841

Simplify table structure for CategoricalData-StateData and and QuantitativeData_StatisticalMeasurementValue #4841

additing titleCache to administrative area

merge validation2 and model 3.5 into trunk

merge cdmlib-persistence from validation branch to trunk

first tests for listByIdentifier

fixing test for SingleReadAlignment and removal of SpecAndObs_Sequence

merge-update from trunk

merge PresenceTerm and AbsenceTerm #4521

add DNA Quality Type vocabulary

add IdentifierType Vocabulary

fix for last commit

create new vocabulary for MediaSpecimenKindOfUnit, move Detail image and Specimen scan from old to new vocabulary and create new terms Living plant photo and Artwork #4269

add NomStatus vocabulary for ICZN #4085

rootNode adaption for classification

merge trunk into v3.3 branch

final implementation of MaterialOrMethodEvent, Cloning, PreservationMethod, ... #3360

Change WaterbodyOrCountry name to Country #3700

update waterbody uuids in class, csv and TermsDataSet

split Waterbody and Country vocabulary and make waterbody an ordinary NamedArea #3700

Chloroplast DNA Markers and some more Eukaryotes #3591

change table name Rights->RightsInfo #2945

add kindOfUnit vocabularies to CDM and tests (update script still missing) #3568

Update script for termtype and some other, remove InstitutionType and COntinent, update idInVocabulary, ...

use strings for rankClass (#2615 und #3544)

use strings for termtypes (#2615 und #3544)

fix test after removing media from specimenOrObservation #3597

first implementation of new molecular package #3360

Rename RightsTerm -> RightsType #1306

Make Specimen - SpecimenDescription one-to-many #3571

Remove GenBankAccession class, Spatium for EN_DASH and some minor stuff for v3.3

implement RankClass, remove iso639_2, add max values to distance attributes, change type for distances,

make term loader required constructor protected and exchange modifier classes by DefinedTerm

remove TdwgArea and add termType and idInVocabulary (#2998, #3478, #3479, #3539) in persistence

added term type to test terms

fix missing marker types leading to TcsRdfImport test failing

adding new MarkerType: COMPUTED

adding missing records to the test TermsDataSet

deleting temp file

fixing absence terms in datasets

Fixes #3203

fixing hibernate_sequences

minor

change uuid for new chromosome number representation in tests

add chromosome number to test terms

fix ExcelSpecimenImportExampleTest by adding rank abbrevs to test ranks

some titlecaches for test ranks

updated testing terms in persistence

adding WGS84 representation

mysterious problems with some service tests

updating dataset

removing redundant entry of HOMOTYPICALGOUP

cleaning up and adding missing tables to CleanSweep dataset => one more test fixed

all test in services now working

implemented tests for marker scope on descriptions

fix labelabbrev for heterotypic synonym relation

title cache for MarkerType voc

merge 3.0.2 to trunk

merging /branches/cdmlib/SPRINT-Chichorieae1/ to trunk

merging PESI brach into trunk

Added merge(T t, LockMode lockmode) and refresh(T t, LockMode lockmode) to allow developers to bypass the session & second-level cache (useful in some instances)

revert the model changes...

rightsterm -> rightstype ticket #1306

bugfixing for modelchanges and adaptation of import routines

#445: Added missing term vocabularies

#445: Added missing term vocabularies
#921: Added setDefaultTerms methods
Added inferred and potential combination synonym relationship types for Fauna Europaea

bug fixing in Test DataSet etc.

protected title cache = false for test files in persistence

ReferenceSystem in persistence

Nullpointer exception in TermInitializer and adapted termsDataSet-with_auditing_info.xml

Activated loading of NameTypeDesignationStatus terms. Fixed unit test.

TypeDesignationStatus renamed to SpecimenTypeDesignationStatus

Minor problems discovered whilst refactoring CATE:
Corrections to User / Group / Authority impl
Changes due to upgrade of hibernate-search

cdmlib-persistence -> new appContext configuration and fixes in tests