adapt GrantedAuthorityImpl factory method
ref #6459 added IntextReferenceHelper class and added some more tests (for name and Annotation)
fix #6459 Implement deduplication for IntextReferences
cleanup
ref #6362, ref #6365 remove occurrence of NonViralName, BotanicalName, ZoologicalName and others
fix #6405 more tests for CdmPermissionVoter.furtherVotingDescisions and fixing the premature returning of DENIED votes made there
ref #6405 tests for the CdmPermissionVoter
Cleanup
ref #1606: add methods to provide filter for reference type
ref #6365 use TaxonNameFactory for botanical names
ref #6365 use TaxonNameFactory for zoological names
ref #6365 merge static methods from BotanicaName to TaxonNameBase
ref #6365 replace ZoologicalName factory methods
ref #6365 Move all ZoologicalName attributes up to TaxonNameBase
ref #6362 removed some NonViralName occurrences (non-compiling as changing in model are still missing)
fix #6296: fix problems for simple search
add test for different search combinations
fix #6342: fix exception for ? in selection dialog
fix #6296: include the common name search into the search query of taxa and synonyms
ref #6190 removing svn property place holder in first line of code
minor
fix #6236 add alphabetic length ordering to name search
fix #6128 include authorship option in taxon and name search
ref #6199 test for reading excluded, unplaced and excludedNote
solving polytomouskey node sort index problems
Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
Conflicts: cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/TaxonInteraction.java cdmlib-services/src/test/java/eu/etaxonomy/cdm/test/function/TestModelUpdate.java
ref #5974 implement substitute method for TaxonService.getAllRelationships
Merge remote-tracking branch 'origin/develop' into develop
Conflicts: cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/TaxonNode.java cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonDaoHibernateImpl.java cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/TaxonNodeServiceImpl.java...
fix failing test
remaining merge issue for morge develop to cdm4.1
Merge remote-tracking branch 'origin/develop' into cdm-4.1
Conflicts: cdmlib-db/pom.xml cdmlib-ext/pom.xml cdmlib-io/pom.xml cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/taxa/NormalExplicitImport.java cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/SpecimenImportBase.java...
ref #6099: removing cascading to child nodes and adapting the service and persistence layer
ref #3658 remove nomenclaturalCode from all datasource related classes
ref #5974 Replace synonymRelationshipType by SynonymType and replace some other occurrences of synonym relationship
ref #5974 Remove synonym relationship first compiling implementation in cdmlib
ref #3547 remove testDelete-result1 and cleanup and reuse testDelete-result
ref #3547 Cleanup TaxonDaoHibernateImplTest.xml
ref #3547 fix related tests
ref #3547 Cleanup TaxonDao.testGetTaxaByNameAndArea.xml test data a bit
fix #6089 Remove taxonomicParentCache and taxonomicChildrenCount, fix Testdata
fix #6122 add titleCache service
Minor cleanup
ref #6089 Remove failing irrelevant test
ref #6089 Remove all calls and methods for taxonomicChildrenCount and taxonomicParentCache
Cleanup; Delete unnecessary test classes.
missing changes in test
#4965 Implement general solution for getDatabase() in WrappedCdmDataSource
#5958 fix failing tests
#5958 Implement name part search as web service
Fix dataset issue in persistence test and clean up
Clean up
#5945 Deduplicate results from termloading by class
refactoring listByIds to loadByIds
attempt to reduce the overhead imposed by database access
#5852 dao, service and controler for taxonNode sibling retrieval
Try to fix pattern issue in taxon uuidAndTitleCache search
Simplify taxonDao
Further develop the CDM preferences #3958
revert last commit
Remove generics from Reference in cdmlib (except for cdmlib-model) #5830
Fix empty protected titlecaches #5763
Remove bidirectionality for supplemental data #5743
Clean up AnnotationDao and AnnotationService
Adapt AnnotationDaoTest #3701
Add IntextReference to related objects test classes
Javadoc
Fix deduplication problem with list order #5652
Add separator after nom status in taxon titleCache #5576
resolving conflicts after merge of ticket_4716 into develop
Cleanup description generics (related to #5357)
organizing imports
migrate to hibernate 5 for cdmlib-services and cdmlib-ext #4716
Adapt cdmlib-persistence to new testing architecture #5370
Upgrade to hibernate 5 with persistence tests running #4716
Upgrade to spring 4.2.2, spring-security 4.0.2 and latest hibernate validator #4716 and #4702
revert chamges in MatchMode
Fix bug for embeddable classes in AdvancedBeanInitializer #5383
fixing #4878
Add test to ensure bean initialization works on hibernate proxies #5077
fixing getUUIDAndTitleCache for Classification and excluding taxa
Fully remove old vocabulary.byClass methods #3843
Remove listEmpty method from TermVocabularyDao #3843
Add vocabulary list method by term types #3843
#5288 - avoiding unncessary entitiy loading, using uuid instead in dao methods
fixing broken pager mechanism for listRankSpecificRootNodes() and improving test coverage