EDIT

change name of ReferencedMedia to ReferencedMediaBase (#2381)

added saveTypeDesignation Test (but is not running for some reason)

countByTitle() method for IIdentifiableService

splitting PolytomousKeyNodeService from PolytomousKeyService & more methods for IdentificationKeyService

further UserDao tests

first tests for list find methods for user and group services (#2283 and #2284).

minor

testGetTaxaByNameForEditor() added

minor changes

Reverting the RightsTerm -> RightsType change (see #1306). This is a model change and needs updates to the schema. We will transfer this into a branch.

comment syso's

created OccurrenceDaoHibernateImplTest class for #2232

minor

bugfix for descriptionBase.clone #2234

replace deprecated methods with new ones #2176

remove duplicate for Argentina

added a test case for polytomous keys

merge 3.0.2 to trunk

Implement all name relationships search

getting all SpecimenOrObservationBases for a Taxon

correcting utf8 chars

sdd import matches descriptions to existing taxa

re-integrating branches/cdmlib/oai-pmh up to revision 10059

merging /branches/cdmlib/SPRINT-Chichorieae1/ to trunk

ignoring test TaxonDaoHibernateImplTest.java

Merging cdmlib-persistence to trunk; pesi. Merge rev 8083-8429.

added a new method to IMediaService that will return the complete ImageInfo object and not just the metadata. Removed persistence layer from call stack of IMediaService methods that talk to ImageMetaData.

merging PESI brach into trunk

deleted very annoying toy projects from trunk

merge cate-development2 branch with trunk

bugfix for TaxonNode.getParent == null

removed System.err.println()

removed System.err.println()

preparing for hibernate-c3p0 & commenting out all System.err.println

minor

new test for the delete method of TaxonNameDao

#1390

Updated ICdmEntityDao replace(T x, T y) and refresh(T t, LockMode lockMode, List propertyPaths) and added methods to IAnnotationDao

Added an IIdentificationKeyDao to query across all identification key types

Refactored free text search to re-use the same code for all identifiable entities. Switched to StandardAnalyzer to include indexing of numbers. Removed redundant code from taxonDao.delete() method (as included entities deleted using hibernate's cascade method)

Refactored methods in VersionableDaoBase etc + added Query-By-Example for CdmEntityDaoBase

minor

revert the model changes...

rightsterm -> rightstype ticket #1306

test for getTaxaByCommonName added

Added methods and tests to recover changes to data

refactoring the references for imports...

Refactored OrderHint and added RandomOrder, plus a couple of small bug fixes in VersionableDaoBase

licence comment added

merged from branches/cdmlib/2.2 7238-7345 into trunk

Merged in changes from cate-development branch and upgraded to spring 3.0.0.RC1

Deleted Keyword class

deleting BibtexEntryType

Intensive model change for referenceBase and subclass, smaller model changes for taxonBase and marker

adding and using yourkit profiler controller

#445: Added missing term vocabularies
#921: Added setDefaultTerms methods
Added inferred and potential combination synonym relationship types for Fauna Europaea

Implemented Grouping Criteria method for ICdmEntityDao, including group by count and group by year / month / day for dateTime fields

finetuning match mechanism

last bugfixes for tests in persistence

minor

Impact of new model changes: new classes and renaming

updates for match strategy in persistence

Added free-text search methods to name & occurrence DAO's

Matching in persistence

matching in persistence

implemented a method that returns a map containing uuid and titleCache of all accepted taxa

Merge for cdmlib-persistence and bugfix in TaxonDaoHibernateImplTest

refactoring of ICdmGenericDao.getReferencingCdmBases()

reimplemented GenericDao.getAllClasses

new searchTaxaByName()

dataportal release v2.0

new dao methods and cleaning up ITaxonDao

Added methods concerning taxonomic tree to taxon service.

minimum base web services for CDM Portal v2.0

TaxonomicTree implementation (persistence)

Made the images in DescriptionElementBase ordered (java.util.List) and changed Media.mediaCreated to a joda DateTime

PublicationBase tests

minor

minor

Corrected and added to tests

Updated tests to reflect the new unique uuid constraint, corrected the CacheStrategyGenerator listener to correctly add updatedBy / createdBy metadata on saveOrUpdate events, corrected a couple of DAO methods, and added merge(T t) to ICdmEntityDao to allow the persisting of detached objects

Merged search changes from 2.0

Fixed name/specimen type designation status mapping

Updated a couple of methods to be more in line with generic dao method pattern

Refactored ISearchableDao to make it more generic, then added it and implementations to daos for Agents, References and Media

Updated TaxonDaoHibernateImplTest.testDelete()

#724: Update taxonomic children count and taxonomic parent cache when deleting a taxon.

More improvements to HibernateBeanInitalizer to allow it to work on envers proxies as well as plain vanilla hibernate proxies

Lots of changes, including,
adding List orderHints, List propertyPaths to dao methods
New MarkerDao & impl
Expanded test coverage of beanintialization and cache strategy generator configuration

additional DAO methods for new REST service

Added test cases for getTaxaByName()

TypeDesignationStatus renamed to SpecimenTypeDesignationStatus

improved reliability of test