EDIT

fix #7405 Rename WorkingSet to DescriptiveDataSet

ref #6588 fist untested implementation of externalLink

mapping TeamAutoInitializer to abstract base class and documentation

TeamAutoInitializer implemented

ref #7150 implementing CollectionVoter and adding new default PermissionGroup 'EditorExtendedCreate'

ref #7018 ref #7016 turning the not needed TypeDesignationVoter into a SpecimenOrObservationBaseVoter - fixing spring configuration

ref #7016 implementing TypeDesignationVoter and more robust permissions:

• avoiding string based cdm authorities
• full test set for CdmPermissionClass

fix #6654 RegistrationVoter implemented

fix #6368 rename table and class TaxonNameBase

ref #6368 remove TaxonNameBase subclasses

ref #6618 add class Character and attributes structure and property

ref #6258 add Registration to hibernate mapping and make in Annotatable and add update script

ref #5974 Replace synonymRelationshipType by SynonymType and replace some other occurrences of synonym relationship

ref #5974 Remove synonym relationship first compiling implementation in cdmlib

removing all (almost all) spy6 references and dependencies

Preliminary add tableGeneratorGlobalOverride to all session factories
again #4716 ()

see also r27338 and r27330

removing tableGeneratorOverride from non testing application contexts

Adapt log4j.properties to hibernate deprecated logging problem

Update dependencies to the latest versions (except for lucene) #4716

Fix upgrade issues after rebase #4716

migrate to hibernate 5 for cdmlib-services and cdmlib-ext #4716

• (except for hibernate search tests)
• including new spring-config structure

Upgrade to hibernate 5 with persistence tests running #4716

Upgrade to spring 4.2.2, spring-security 4.0.2 and latest hibernate
validator #4716 and #4702

first implementation of TaxonNodeAgentRelation #3583

doumentation

merge validation2 and model 3.5 into trunk

separate Amplification and AmplificationResult.java #4541

implement SingleReadAlignment.java #4529
not yet ready

merge-update from trunk

merge PresenceTerm and AbsenceTerm #4521

fix bug, add OrederedTerm to hibernate cfg

add validation framework classes #4439

first implementation for DnaQuality #4434

remove View class #4316 and update script for authorTeam rename #4432

merge-update from trunk

adapted tcs rdf and xml import, using apache jena for rdf import
tcs import for caryophylales
minor

add identifiers to hibernate.cfg

fixing #4151 (AdvancedBeanInitializer causes problems when initializing taxonnode hierarchies)

adding permission class for Teams and Persons wich according validator

CdmPermissionClasses for names and references, tests implemented, bug in CdmPermissionClass.from() fixed - #4055 (action enablement adapts to the users granted authorities)

update schema location

switch to Advanced initializing

switching back to HibernateBeanInitializer

switch to advanced bean initializing

use default init as advanced stil creates error

switch to AdvancedBeanInitializer again

revert to DefaultTermInitializer

switch to AdvancedBeanInitializer (also in persistence xml)

switch to AdvancedBeanInitializer

fixing #3786 (Taxon editor view is not enabled even if a user has sufficient permissions)

improving the TitleCacheAutoInitializer and turning it into a TitleAndNameCacheAutoInitializer

moving all beaninitializer classes to new package 'eu.etaxonomy.cdm.persistence.dao.initializer'

change version ->3.3.0, move CdmMetaData, change schema version -> 20130924, fix TaxonServiceSearch test, update update-script

moving preferences into new package and some minor changes

final implementation of MaterialOrMethodEvent, Cloning, PreservationMethod, ... #3360

Change WaterbodyOrCountry name to Country #3700

Update script for termtype and some other, remove InstitutionType and COntinent, update idInVocabulary, ...

change some names in molecular and update the update script

Add MediaSpecimen (still missing schema updater and tests) #3614

first implementation of new molecular package #3360

Rename RightsTerm -> RightsType #1306

implement CDMPreferences #3555

move DescriptionElementSource to description package #2345

remove ReferencedMediaBase and Figure, let PhylogeneticTree inherit from Media, remove citation and microcitation columns from DB

rename FieldObservation -> FieldUnit #3351

adding recordBasis to SpecimenOrObservationBase and removing some DerivedUnit classes (all #3378) and adding kindOfUnit to SpecimenOrObservationBase (except for according termType and vocabulary) #3568.

Remove GenBankAccession class, Spatium for EN_DASH and some minor stuff for v3.3

exchange modifier classes by DefinedTerm, add termtype to csv files, make term loader required constructor private

remove TdwgArea and add termType and idInVocabulary (#2998, #3478, #3479, #3539) in persistence

marker.markerType always initialized and serialized

removing events from hibernate.cfg.xml

fix all Specimen test including new implementation for hibernate listeners

Hibernate 4 migration. All test running except for SDDImport (Out of memory)

fixing #3216 (specimens: type specimens should be displayed with type status)

introducting MediaAutoInitializer

autoinitialization of termbase.references and point.exactlocation (indirectly)

using run-as authentication in firstDataInserter

test for TaxonService.findByFullText() successful

reverting erroneously commits r16027 to r16031

test for TaxonService.findByFullText() successful

fixing testing context in persitence and fixing test

AccessDecisionVoter based acl implementation working - all test succeed, but assertions in test missing

reverting last commit - will be committed again later

merging in git branch 'methodSecurityExpressions' and resolving conflict in SecurityTest.java

more tests and features for #476: Implement free-text search methods for TaxonBase and TextData

security stuff

merging branches/cdmlib/Kew_Palm_Use_Data_Extension into trunk & cleaning up a bit

AT: committing merge changes

AT: committing latest changes to the remote project

minor change in p6spy.properties - using default log file

Merging r13268 through r14040 from trunk/cdmlib into branches/cdmlib-unitils3

h2 as test alternative database & potentially fixing #2100 (Fix tests not running in suite)

whitespace

adapting xml datasources to unitils 3.3

related to #2664 (Specimen maps are not shown in cyprus dev portal) - now the occurrence map is colored

change name of ReferencedMedia to ReferencedMediaBase (#2381)

fixing #2243 "c3p0 connection pool is loosing connection over night"

merge 3.0.2 to trunk