EDIT

Some additional tests for sorting homotypical groups #3338

Add circular check for homotypicgouptaxon comparator #3338

Include rank comparison in HomotypicGroupTaxonComparator #3338

Improve sort order within a homotypic group (new Comparator) #3338

Improve sort order within a homotypic group (new Comparator) #3338

organizing imports

Add some more BeanUtil test to other classes #5307

Fix bean read/write inconsistency in Taxon and TaxonBase #5307

Rename remaining occurrences of xxxAuthorTeam #4968

Rename remaining occurrences of combinationAuthorTeam and
basionymAuthorTeam in code and other files

Rename NonViralName.xxxAuthorTeam to xxxAuthorship #4968

• add @Audited to all type properties
• add taxonNodeComparator for rank and alphabetical orderedVocabularyDao
• change delete() methods arguments to UUIDs

minor cleanup

make the taxonomic tree editable in natural order (see #3771), adding comparator

fix hybrid parsing with existing hybrid relationships #2576

merge validation2 and model 3.5 into trunk

activating the swagger rest service documentation by reverting the revertion of the premature committed experimental branch (swagger) svn: r21387, git: be528c1edf

test for Amplification labelCache

merge PresenceTerm and AbsenceTerm #4521

• added exception throwing to URI assembly in Sequence class
  • handled exception in editor details view

rename Reference.authorTeam -> authorship #4432

fix delete taxon nodes with children

typos

removing old ignore and FIXME #530

reverting erroneously committed experimental branch (swagger)

implementing CdmTypeScanner and test

move MockCdmCacher to TermLoader

fix failing single model test due to new MockCdmCacher

added comment for mock cdm cacher

MockCdmCacher : added mock cdm cacher for tests in cdmlib-model
IdentifiableEntityTest : using mock cdm cacher in tests

#4114 sort order in taxon navigator and adding that autonyms could be whether infraspecific or infrageneric (Art. 22.3 and 26.3)

fix compareTo for IdentifiableEntity

minor

add NomStatus vocabulary for ICZN #4085

making TaxonNodeByNameComparator truely null save - #2912 (NPE in TaxonNodeByNameComparator when Taxon in TaxoNode is null)

minor

minor

reordering and changing tests for OriginalSOurceType and make second non capital in MeasurementUnit.csv

change version ->3.3.0, move CdmMetaData, change schema version -> 20130924, fix TaxonServiceSearch test, update update-script

moving preferences into new package and some minor changes

partial implementation of CDM preferences (dao, service and enums): #3555

Change WaterbodyOrCountry name to Country #3700

rename getRankByAbbrev methods to getRankByIdInVoc #3479

minor changes, remove private methods

add kindOfUnit vocabularies to CDM and tests (update script still missing) #3568

some fixes for modell change branche

implement tree index update

Update script for termtype and some other, remove InstitutionType and COntinent, update idInVocabulary, ...

added isKindOf and getGeneralisationOf(recursive) to IEnumTerm #3611

implemented IEnumTerm and its hierarchies #3611, #3618

Remove media from SpecimenOrOBseravationBase #3597

devided TimePeriod and TimePeriodParser #3617

first implementation of new molecular package #3360

implement kindOf for term types #3161

minor

implement CDMPreferences #3555

Make Specimen - SpecimenDescription one-to-many #3571

implement sortIndex for TaxonNode and remove usedSynonym from addChildNode methods (#3508)

make Sequence-PhylogeneticTree ManyToMany (#2540)

resizing titleCache and fullTitleCache (#1592) and renaming CategoricalData.states -> stateData (#2923)

move DescriptionElementSource to description package #2345

adding recordBasis to SpecimenOrObservationBase and removing some DerivedUnit classes (all #3378) and adding kindOfUnit to SpecimenOrObservationBase (except for according termType and vocabulary) #3568.

updated Media.addDescription to media.putDescription #2511

add nom status type "new combination" #3545

added ranks proles, race and sublusus #2793 and updated TermUpdater

Remove GenBankAccession class, Spatium for EN_DASH and some minor stuff for v3.3

implement RankClass, remove iso639_2, add max values to distance attributes, change type for distances,

exchange modifier classes by DefinedTerm, add termtype to csv files, make term loader required constructor private

remove TdwgArea and add termType and idInVocabulary (#2998, #3478, #3479, #3539)

minor

fix bugs and adapt tests for original source type

update factory methods for original sources #1549

change ICBN to ICNAFP #2864

update ReferenceFactory method

update ReferenceFactory method

update ReferenceFactory method

update ReferenceFactory method

add factory method for derivation event with type parameter

merge trunk and bugfix linkbackuri jaxb

fixing uris

changing Annotation.linkbackUrl to type URI, also changing API method names

Hibernate 4 migration. All test running except for SDDImport (Out of memory)

factory method for molecular.GenBankAccession

factory method for molecular.Locus (update Test)

updated tests in accordance with update in the Polytomous Key Node numbering.

fixed encoding to UTF-8

• updated tests to reflect new node numbering
• removed print out in PolytomousKeyNode.java

solving git-svn branch and merge problems

fixing bug in getMediaForTaxon() & whitespace

MediaUtils.findPreferredMedia() returns Map

prevent media from being corrupted - fixing bugs in test and utils class

fix encoding problem

fix bug in point tertier caching #2962

fixing test with had error due to error prone and misleading instance method

fix tests for PolytomousKeyNodes, #2892

adapt the search to be able to find misapplied names: to include misapplied names use the new configurator attribute doIncludeMisappliedNames

convenience method for editing states #2673

Some new factory methods and new transient method categoricalData.getStatesOnly (with tests)

implemented getModifiers(TermVocabulary) on DescriptionElementBase

remove imports

remove imports