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# Date Author Comment
a5d7d5a5 04/16/2016 01:09 AM Andreas Müller

Allow parsing of accent acute for coordinates #5716

41c65daf 04/12/2016 10:51 AM Katja Luther

fix #5669

d9c82be9 04/05/2016 08:13 AM Andreas Kohlbecker

#5679 catching and ignoring LIEs during the attempt to clean up NULL items in sets

83503cf2 04/05/2016 08:04 AM Patrick Plitzner

Fix label for taxon description #5547

712ad8f3 04/04/2016 04:04 PM Andreas Kohlbecker

fixing LIE in webservice: taxonNode.sortIndex needs to be @Transient

bd9e2e85 04/04/2016 01:42 PM Andreas Müller

Update javadoc and illegitimate status for
NomenclaturalStatusType.CONS_DESIG #5662

b4a6b4e3 04/04/2016 01:40 PM Andreas Müller

Minor change in order

c5aa066b 04/04/2016 10:12 AM Katja Luther

fix move taxonnode and remove null values from childrenlists in several places

121a05dc 03/31/2016 11:41 AM Andreas Müller

Remove nomenclatural status type ined. as it is a duplicate for nom.
provis. (related to Cuba #5443)

95b83588 03/31/2016 11:26 AM Andreas Müller

Added nom. cons. des. status #5662

076a74b5 03/31/2016 11:23 AM Andreas Müller

Add nom. cons. des. to parser #5662

277d4a6d 03/31/2016 11:14 AM Andreas Müller

Add orth. rej. to parsing #5649 and clean up test

534044ea 03/24/2016 02:53 PM Andreas Kohlbecker

#5659 fixing hibernate search indexing annotation

c1f24dc3 03/24/2016 11:21 AM Andreas Müller

Some additional tests for sorting homotypical groups #3338

1a10708d 03/24/2016 11:21 AM Andreas Müller

Add circular check for homotypicgouptaxon comparator #3338

9e7593f0 03/23/2016 04:29 PM Andreas Kohlbecker

#5635 indexing : skipping MultilanguageText entities with text == null

82ca4447 03/23/2016 04:19 PM Andreas Müller

Include rank comparison in HomotypicGroupTaxonComparator #3338

b37deaa3 03/23/2016 02:06 PM Katja Luther


051d0697 03/23/2016 01:27 PM Andreas Müller

Fix bug in HomotypicGroupTaxonComparator #3338

93979807 03/21/2016 10:44 AM Patrick Plitzner

Merge branch 'develop' of ssh:// into develop

2f02894b 03/20/2016 12:30 AM Andreas Müller

Ordering of multiple Homotypic Groups #3338

b8c0c883 03/18/2016 05:36 PM Andreas Müller

Some cleanup for HGTaxonComparator #3338

15578742 03/18/2016 05:01 PM Andreas Müller

Apply HomotypicGroupTaxonComparator to all existing uses of old
TaxonComparator #3338

a077b90a 03/18/2016 04:43 PM Andreas Müller


b125ea21 03/18/2016 04:15 PM Andreas Müller

Add Orthography Rejected to NomenclaturalStatusType #5649

d5d79aea 03/18/2016 04:12 PM Andreas Müller

Improve sort order within a homotypic group (new Comparator) #3338

470faaae 03/17/2016 06:47 PM Patrick Plitzner

Fix formatter bug

4e201def 03/16/2016 05:30 PM Andreas Müller

Fix deduplication problem with list order #5652

5df69434 03/15/2016 01:28 PM Katja Luther


d9f134f9 03/14/2016 11:51 AM Katja Luther

TaxonNodeByNameComparator is not a component anymore and add configurable delete method for media

196284c8 03/07/2016 05:36 PM Andreas Müller

Add cultivated, presence questionable to PresenceAbsenceTerms #5443

1549333b 03/02/2016 10:13 AM Andreas Müller

Fix combination author without space parsing #5618

c561f681 03/01/2016 11:52 AM Andreas Müller

Implement notho rank recognition #3868

d5f57c61 02/29/2016 01:42 PM Katja Luther

workaround for #5590

68381a3f 02/26/2016 12:57 PM Katja Luther

workaround for delete of polytomous keynodes, because of null values in children list

b53cbc41 02/25/2016 04:35 PM Andreas Müller

Add post-separator to better handle tagged text

d16b989b 02/23/2016 03:49 PM Patrick Plitzner

Refactor format method of cdm formatter

16f965a1 02/22/2016 04:32 PM Patrick Plitzner

Refactor formatter framework

  • Simplify interface
  • added javadoc
  • added static methods
8e79f830 02/19/2016 02:16 PM Andreas Müller

Add reported in error static method

ef31dd4e 02/19/2016 02:16 PM Andreas Müller

Fix cache strategy for taxon base with appended name #5586 and #5577

502a8f1b 02/19/2016 02:16 PM Andreas Müller

Fix bug in TextData factory method.

95c664e5 02/18/2016 01:19 PM Andreas Müller


2ddd75d2 02/18/2016 01:19 PM Andreas Müller

Add separator after nom status in taxon titleCache #5576

bffac47b 02/17/2016 01:08 PM Patrick Plitzner

Fix for DnaSample relation to Identifier, Annotations, etc.

  • Add DnaSample to metaDef for Any relation in
  • added test for SampleDesignation for DnaSample
b4f781f9 02/16/2016 04:48 PM Andreas Müller

Fix et al. for collectors #5568

ac5020e6 02/15/2016 03:06 PM Andreas Müller

Fix CCE in DefinedTermDaoImpl.getPartOf (#5556) and make deproxy more

ad690b5a 02/12/2016 01:58 PM Andreas Müller

Fix javassist error for specimen cache strategy loading #5545

5c9a40ea 02/10/2016 02:45 PM Andreas Kohlbecker

Merge branch 'hotfix/3.12.3' into develop


7a62cb64 02/10/2016 01:59 PM Andreas Müller

Implement preliminary Specimen cache strategy using facade cache

3293f8a5 02/09/2016 11:13 AM Andreas Müller

Allow recognizing forma in ranks

974e7f9a 02/05/2016 02:04 PM Andreas Müller

Use correct column length annotation #5535

205e4322 02/04/2016 11:45 AM Katja Luther


7575dc85 02/03/2016 05:14 PM Andreas Müller

Fix volume range bug in name parser #5518

c0889a02 01/22/2016 07:03 PM Andreas Müller


936e40e2 01/21/2016 03:26 PM Andreas Müller

Fix NPE in HibernateProxyHelper for null objects

49f50a2d 01/20/2016 02:13 PM Andreas Müller


af42d93a 01/20/2016 02:13 PM Andreas Müller

Adapt to hibernate deprecated logging problem

0d6db359 01/19/2016 02:37 PM Andreas Müller

Fix NPE in DistributionNodeByAreaLabelComparator

c0e106fe 01/14/2016 04:39 PM Andreas Müller

Further fix right quotation mark parsing

d4287831 01/14/2016 04:39 PM Andreas Müller

Add different apostroph to author name parser

58025381 01/14/2016 04:39 PM Andreas Müller

Add NomenclaturalStateType 'ined.'

eb87bf2e 01/14/2016 04:39 PM Andreas Müller

Add commented base code for guessBasionym function to Homotypical group

  • and cleanup
6ca0c0bd 01/14/2016 04:39 PM Andreas Müller


cd26eb20 12/22/2015 02:32 PM Andreas Kohlbecker

fixing problems regarding lucene search after merge - one test still failing

f8edbccb 12/21/2015 04:50 PM Andreas Kohlbecker

resolving conflicts after merge of ticket_4716 into develop

db28183a 12/17/2015 12:28 PM Andreas Müller

Some minor markup routine updates

d1cf4a26 12/15/2015 12:25 PM Katja Luther

add null check for delete and minor

b1c5e27c 12/11/2015 11:27 AM Andreas Kohlbecker

organizing imports

c70a7f0f 12/09/2015 05:22 PM Andreas Kohlbecker

#4716 reduicing clutter in the lucene index and solving performance problems which probably fixes #4277 and #3663

8d35d957 12/07/2015 09:40 AM Andreas Kohlbecker

#4761 removing @Indexed from abstract base classes since hibernate now fully supports polymorph class hierarchies

1432e66e 12/04/2015 06:01 PM Andreas Kohlbecker

#4761 removing @Field annotation from which has become obsolete

00bea758 12/04/2015 05:59 PM Andreas Kohlbecker

#4761 fixing broken area filter join query, by circumventing a bug in lucene LUCENE-4824 (numeric fields not supported in join queries)

2a5361d0 12/02/2015 04:43 PM Andreas Kohlbecker

index creation without errors, most lucene search test working again

  • using TextField instead of StringField to enable tokenization for some fields
  • @IndexedEmbedded(includeEmbeddedObjectId=true) added where necessary
6fd1aa50 12/02/2015 11:08 AM Patrick Plitzner

Add missing formatter to factory method

  • Fix possible NPEs
0b0a8928 12/02/2015 11:08 AM Patrick Plitzner

Implement FormatKeys for all currently used occurrences parameters

64f24974 12/02/2015 11:08 AM Patrick Plitzner

Implement first take on formatter framework

A formatter provides a string representation of an object based on the
selected FormatKeys

6757ea6d 12/01/2015 01:54 PM Katja Luther

changes for #4960 and #4959

ab0430b9 11/27/2015 05:49 PM Andreas Kohlbecker

#4716 IndexDocValue related issues solved, indexing now without exceptions, most tests in TaxonServiceSearchTest successful - commit of missing file

8096b11a 11/27/2015 04:30 PM Andreas Kohlbecker

#4716 IndexDocValue relates issues solved, indexing now without exceptions, most tests in TaxonServiceSearchTest successful

e6df36cc 11/26/2015 10:05 AM Andreas Kohlbecker

first steps to make lucene working again

088ea145 11/24/2015 03:55 PM Andreas Kohlbecker

#4716 temporarily making 3 fieldnames lowercase to prevent from trouble with new hibernate naming strategy, needs to be reverted later, see #5369

5e4f7643 11/24/2015 11:35 AM Andreas Müller

Update some more hibernate mapping nameings #4716 and #5369

58136b31 11/23/2015 04:13 PM Andreas Müller

Fix upgrade issues after rebase #4716

eec2d79d 11/23/2015 04:13 PM Andreas Müller

Fix issues after rebase #4716

975a7d74 11/23/2015 04:13 PM Andreas Müller

Fix compile issues after rebase #4716

2638be38 11/23/2015 04:13 PM Andreas Müller

migrate to hibernate 5 for cdmlib-services and cdmlib-ext #4716

  • (except for hibernate search tests)
  • including new spring-config structure
3dd6c00e 11/23/2015 04:13 PM Andreas Müller

Upgrade to hibernate 5 with persistence tests running #4716

1f9b3225 11/23/2015 04:10 PM Andreas Müller

Some cleanups in hibernate user types

21d1be03 11/23/2015 04:10 PM Andreas Müller

Fix bug for embeddable classes in AdvancedBeanInitializer #5383

cd02d8bd 11/17/2015 03:54 PM Andreas Müller

Fix bug for embeddable classes in AdvancedBeanInitializer #5383

3dea8ed1 11/17/2015 02:46 PM Katja Luther

fixing #4878

2ae69503 11/11/2015 10:38 AM Patrick Plitzner

Add orphanRemoval to SingleReadAlignment set of Sequence #5200

6aa0af63 11/10/2015 12:34 PM Katja Luther

fixing #5303

1b12bb24 11/10/2015 12:30 PM Katja Luther

fixing #5303

455c5da0 11/10/2015 11:56 AM Patrick Plitzner

Set singleRead to null when removing SingleReadAlignment from sequence
to avoid "object would be re-saved" #5200

47ff0a08 11/10/2015 09:41 AM Katja Luther

Revert "accept the change from a number to null in TimePeriod fields #5319"

This reverts commit a3960fa7c279f2aa9fafbefde098c529e269d382.

3db5c325 11/05/2015 12:09 PM Katja Luther

fix #5341 and fixing deletion of specimen

9bfdcf39 10/28/2015 05:09 PM Patrick Plitzner

Return correct match strategy #5337

3087df1b 10/27/2015 04:24 PM Cherian Mathew

#5297 Refactor ProgressMonitorController, Add Remoting Progress monitor

#5297 Add progress monitor service, Add test services

#5297 Add monit import method

#5297 Update no. of work units

#5297 Add new thread class for remoting monitors

#5297 Add owner field to monitor thread and user checks in service...

f9656765 10/26/2015 03:12 PM Andreas Müller

Minor cleanup