ref #6401 better distinguish IdentifiableEntity.compareTo from DefinedTermBase.compareTo
Cleanup
ref #6401 Fix problems with generics due to jdk1.8
ref #6362 remove further occurrences of NonViralName
ref #6365 use TaxonNameFactory for static parser methods
ref #6365 use TaxonNameFactory for botanical names
ref #6365 use TaxonNameFactory for zoological names
fix #6360 use TaxonNameFactory for NonViralNames
fix #6364 use TaxonNameFactory for viral and bacterial names
fix #6366 use TaxonNameFactory for cultivar names
ref #6365 Move zoological parse methods to TaxonNameBase
Remove isCodeCompliant from TaxonNameBase
ref #6366 move cultivar attributes and functions to TaxonNameBase
cleanup
ref #6365 merge static methods from BotanicaName to TaxonNameBase
ref #6365 ref #6360 ref #6364 replace taxon name factory methods
ref #6360 replace NonViralName factory methods
ref #6365 Move all ZoologicalName attributes up to TaxonNameBase
ref #6364 Move all BacterialName attributes up to TaxonNameBase
ref #6364 Move all ViralName attributes up to TaxonNameBase
minor
ref #6369 adapt existing occurrences of interface to removed generics
ref #6369 remove generics from interfaces
fix #6369 add interface for all names
ref #6369 add IViralName interface
ref #6369 add remaining interfaces
ref #6362 removed some NonViralName occurrences (make it compiling again)
ref #6369 Add interfaces for TaxonNameBase and NonViralName
ref #6362 removed some NonViralName occurrences (non-compiling as changing in model are still missing)
Revert "Revert "ref #6369 Add interfaces for TaxonNameBase and NonViralName""
This reverts commit 949c09b142f2806539e3fb399bef980d3e17e293.
Revert "Revert "fix #6360 moved all NonViralName functionality to TaxonNameBase""
This reverts commit 9b9d0a956d78e3aec1024bc0a5fa33f33e5b33aa.
Revert "fix #6360 moved all NonViralName functionality to TaxonNameBase"
This reverts commit 7d8c96134bda3c11d053df2e8e5d03f32a500ee3.
Revert "ref #6369 Add interfaces for TaxonNameBase and NonViralName"
This reverts commit 1e42628a4c24232f9b03a2a1e508d7cd79e0e0ba.
fix #6360 moved all NonViralName functionality to TaxonNameBase
Initialise sample designation to format keys for IdentifiableEntity
ref #6320 Add pherogram title cache to format keys
Add new English quotation marks
missing changes for repair methods and cdmPreferences in editor
ref #6190 removing svn property place holder in first line of code
minor to fix the failing test
ref #6283: minor changes to fix exceptions in polytomous key editing
ref #6283: fix NPE exceptions caused by null values in children list
ref #5762 Rights to be reusable, still need to update existing unique
ref #3934 add department to NamedAreaLevel
cleanup (including deprecated methods in Media)
Cleanup and new Rights Factory method
fix #6244: add removeNullValues in updateSortindex method to avoid exception when collection contains null values
fix #6134 add group taxa by marker and refactor treeindex handling
ref #6211 cleanup old code
fix #6211 fix API incompatibility
fix #6211 reduce initialization for synonymy
ref #6220 javadoc
fix #6220 Improve isOrphaned definition for Taxon.
ref #6199 test for reading excluded, unplaced and excludedNote
solving polytomouskey node sort index problems
Latest BM import updates for Salvador
fix #6200 Change order of NomenclaturalCodeUpdater and allowOverride adder to avoid null values
Remove deprecated adder methods for multilanguage text
ref #5634 add getter and putter for excluded note
ref #5970 remove transient from allowOverride
Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
Conflicts: cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/TaxonInteraction.java cdmlib-services/src/test/java/eu/etaxonomy/cdm/test/function/TestModelUpdate.java
fix #5680: get method needs to be named like the attribute
ref #4866 Create new description set when cloning taxon (avoid HibernateException)
Conflicts: cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/ITaxonNodeService.java
fix TermIdInVocabularyComparator
Merge remote-tracking branch 'origin/develop' into develop
Conflicts: cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/TaxonNode.java cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonDaoHibernateImpl.java cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/TaxonNodeServiceImpl.java...
remove final from classification.description
ref #5634 fix clone issue for excludedNote
Cleanup language string handling and cloning
ref #5952 Add index to identityCache
ref #3658 further improvements for NomCode update
#5634 Add excludedNote to TaxonNode (still some tests not running)
ref #6099: removing cascading to child nodes and adapting the service and persistence layer
ref #3925 Move excluded and unplaced to TaxonNode
fix #5952 Add identityCache
ref #3658 Update nomenclatural code as CdmPreference (most probable value)
ref #5974 Replace synonymRelationshipType by SynonymType and replace some other occurrences of synonym relationship
ref #5974 Remove synonym relationship first compiling implementation in cdmlib
fix #6089 Remove taxonomicParentCache and taxonomicChildrenCount, fix Testdata
fix #6089 Remove taxonomicParentCache and taxonomicChildrenCount from Taxon
specimen import/search changes
fix #6072 Implement findIdentifiableEntityByMarkers
ref #6089 Remove all calls and methods for taxonomicChildrenCount and taxonomicParentCache
Cleanup; Delete unnecessary test classes.
Add Vorabdr. to parsable volume
Add javadoc for languages
fix #6060 parse author with -e-
rel #6057 further improvements for authors with accent grave
fix #6057 Accent Graph in author parser
fix #5893: set parse reference public to use it in fauna europaea import
fix #6030 Parse Genus hybrid formulas correctly
fix #6045: fixing the NaturalOrderComparator and complete the test
ref #6045 Fix NPE for TaxonNaturalComparator
fix #5869 adapt implementation for reusing names or taxa with remoting