EDIT

cleanup

cleanup

ref #9702 add factory method for Collection

ref #9678 implement cache strategies for field unit and derived unti within cdmlib model

cleanup and return empty Set (not null) for getOriginals

cleanup

ref #5573: remove resetTitleCache in setMedia()

ref #5573: reset titleCache for setMedia in mediaSpecimen

ref #9595 move xxxPreferredDetermination from facade to SpecimenOrObservationBase

ref #9556 avoiding collection of full derivatives tree in DTOs - using maxdepth parameter

ref #9556 avoiding collection of full derivatives tree in DTOs - bugfix

ref #9556 avoiding collection of full derivatives tree in DTOs

cleanup

cleanup

cleanup

ref #9443, ref #5575 tissue sample as DnaSample generation and initialization of DNA sample cache strategies

ref #5575 refactor initialization of cache strategy (initialize when needed, not in constructor)

cleanup

cleanup

ref #9395 adapting services and web-services to return all root units

fix #9395 DerivedUnit.collectFieldUnits() as DerivedUnit.collectRootUnits() to return all types of root units

ref #7612 a first (preliminary) version of MediaSpecimenDefaultCacheStrategy

cleanup

ref #9114 add URI Wrapper and replace all java.net.URI occurrences by the wrapper in cdmlib

cleanup

ref #9280 rename IKeyTerm.getMessage() => .getLabel()

replace links to trac tickets by links to redmine tickets in javadoc

cleanup

ref #9252 adapting service method no new DTO name

fix return type of clone methods in CdmBase classes and some cleanup

cleanup

ref #9204 remove commons-lang2 from cdmlib dependencies

ref #8442 fix some jaxb annotations

ref #8429 rename DeterminationEvent.setOfReferences to DeterminationEvent.references

fix potential NPE in GatheringEvent.clone

cleanup

Fix clone() method of SpecimenOrObservationBase

ref #8162 adapt cdmlip to new term package structure

ref #8030 Move cache updating to model classes, no tests yet

ref #7874 implement cache update for additional caches

cleanup

Change system.out to log.info()

fix #7757 removed all deprecated hibernate @Index (and @Table) annotations from model

revert commit ff21181c

mend

ref #7599: minor

adding new SpecimenOrObservationType and smaller changes

cleanup

ref #3560 add publish flag to lucene index

ref #6720 make individualCount a string

cleanup

ref #6241 replaced @created by @since in cdmlib

ref #6241 change @date to @since (fix)

ref #6241 change @date to @since

ref #6158 avoid URL redirects

cleanup

cleanup

typo

ref #6630 and ref #6368 remove generics from TaxonName

fix #6368 rename table and class TaxonNameBase

cleanup

fix #6459 Implement deduplication for IntextReferences (add interface to SpecimenOrObservationBase)

cleanup

simplify generics for SpecimenOrObservationBase

#6401 update generics for java1.8 upgrade

Cleanup

ref #6401 Fix problems with generics due to jdk1.8

ref #6190 removing svn property place holder in first line of code

Cleanup language string handling and cloning

ref #5952 Add index to identityCache

fix #5952 Add identityCache

Cleanup

Add getter/setter for preferredStableIdentifier #5606

Fix Jaxb for SpecimenOrObservationBase #5606

Add preferred stable URI to SpecimenOrObservation #5606

#5659 fixing hibernate search indexing annotation

Fix javassist error for specimen cache strategy loading #5545

Merge branch 'hotfix/3.12.3' into develop

Conflicts:
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/TaxonNodeServiceImpl.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/TaxonServiceSearchTest.java

Implement preliminary Specimen cache strategy using facade cache
strategy

Use correct column length annotation #5535

#4716 reduicing clutter in the lucene index and solving performance problems which probably fixes #4277 and #3663

index creation without errors, most lucene search test working again

• using TextField instead of StringField to enable tokenization for some fields
• @IndexedEmbedded(includeEmbeddedObjectId=true) added where necessary

#5249 Correct if statements

#5223 Copy utility method from service to derived unit

Implement hasCharacterData and isCharacterData.
And fix characterData semantics.

move specimen.getCharacterData to model

Fix singleton constructor with specimen types

• add @Audited to all type properties
• add taxonNodeComparator for rank and alphabetical orderedVocabularyDao
• change delete() methods arguments to UUIDs

Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/cdmlib into remoting-4.0

Conflicts:
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/DefinedTerm.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/DefinedTermBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/Reference.java...

added not blank handling for potential notEmpty strings #4653 , solving compilation issues

added not blank handling for potential notEmpty strings #4653

merge validation2 and model 3.5 into trunk

add NewInstance for Names in Determination Event

updated getTermByUuid methods in the term classes to use the cacher

added Cascade.MERGE to all fields with annotation Cascade.SAVE_UPDATE

merge-update from trunk

• implemented bidirectionality for derivation events

merge PresenceTerm and AbsenceTerm #4521

Add institution to DerivationEvent and Amplification

• fixed typo

merge-update from trunk