Add TypeDesignations to @AnyMetaData #3701
Clean up IdentifiableSource java file
Add missing @AnyMetaDef metaValues #3701
Add symbol and reverseSymbol do DefinedTermBase #5734
Adapt table and column names to hibernate 5 naming strategy #5369
... and some other changes to table/attribute names
Minor change in order
Fix deduplication problem with list order #5652
Fix for DnaSample relation to Identifier, Annotations, etc.
Fix CCE in DefinedTermDaoImpl.getPartOf (#5556) and make deproxy more generic
Use correct column length annotation #5535
Fix NPE in DistributionNodeByAreaLabelComparator
resolving conflicts after merge of ticket_4716 into develop
add null check for delete and minor
organizing imports
#4716 reduicing clutter in the lucene index and solving performance problems which probably fixes #4277 and #3663
#4761 removing @Indexed from abstract base classes since hibernate now fully supports polymorph class hierarchies
#4761 removing @Field annotation from CdmBase.id which has become obsolete
index creation without errors, most lucene search test working again
changes for #4960 and #4959
first steps to make lucene working again
Update some more hibernate mapping nameings #4716 and #5369
Fix upgrade issues after rebase #4716
Fix issues after rebase #4716
migrate to hibernate 5 for cdmlib-services and cdmlib-ext #4716
Upgrade to hibernate 5 with persistence tests running #4716
Revert "accept the change from a number to null in TimePeriod fields #5319"
This reverts commit a3960fa7c279f2aa9fafbefde098c529e269d382.
#5297 Refactor ProgressMonitorController, Add Remoting Progress monitor
#5297 Add progress monitor service, Add test services
#5297 Add monit import method
#5297 Update no. of work units
#5297 Add new thread class for remoting monitors
#5297 Add owner field to monitor thread and user checks in service...
accept the change from a number to null in TimePeriod fields #5319
Merge branch 'ticket-5066' into develop
Conflicts: cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/common/CdmEntityDaoBase.java cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/PostMergeEntityListener.java
minor clean ups
Add cascade merge to members field
#5299 Add new entity listener and event firing
Document new initListener method (#5161)
#5161 Add initListener method to CdmBase object
#5100 Fix default language for remoting
Fix missing protected evaluation for Taxon titleCache #5018
Add getTermByIdInVoc method to vocabularies
Improve E+M post import methods #3979
Add publisher role uuid and clean up FirstDataInserter #3979
forgot to check in the changes
fix #4976 Titlecache for new vocabularies not filled correctly
minor cleanup
Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/cdmlib into remoting-4.0
Conflicts: cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/DefinedTerm.java cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/NonViralName.java cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/INameService.java...
fix test and add factory method #3583
more getters/adders, update script, vocabulary and test vocabulary for TaxonNodeAgentRelation #3583
minor changes, renaming, code formatting, javadoc
minor
improve handling of titlecache in terms #3148
moving UuidAndTitleCache from model to persistence. #4799
Conflicts: cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/DefinedTerm.java cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/DefinedTermBase.java cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/Reference.java...
added id to uuidAndTitleCache
AnnotatableEntity : removed dynamic generation of marker set Taxon : reverted TaxonServiceImpl : added affected object on delete
adding missing @Transient
privates for uuidAndTitleCache
add validation rule request for idInVocabulary #3379, #4245
fix move description element bug #4806
Capital letters for term types, related to #4553
adapting the setters of attributes with @NullOrNotEmpty annotations #4653
Make deduplication of TeamOrPersonBase possible in cdmlib #4768 and solve test problem in CdmGenericDaoImplTest #2096, finding some bugs in between
add Transient to getNullSafe methods and make MarkerType not null Level2 rule
make identifier annotatable #4673
merge validation2 and model 3.5 into trunk
add LSID and Alternative field number to Identifier Type vocabulary #4708, #4674
updated getTermByUuid methods in the term classes to use the cacher
ICdmCacher, ICdmUuidCacher, CdmCacher, CdmTermCacher : refactored and added load method Language, NameRelationshipType, Rank : now uses cacher only if termap is null or empty and only when class matches the specific term type MockCdmCacher: not required anymore...
added Cascade.MERGE to all fields with annotation Cascade.SAVE_UPDATE
activating the swagger rest service documentation by reverting the revertion of the premature committed experimental branch (swagger) svn: r21387, git: be528c1edf
adding ISelfDescriptive from validation branch
VocEnum
factory method for Identifier Type
labels for some TermTypes
doc
handle duplicates in identifier list
solve identifier conflict
Bidirectional identifier handling
implement SingleReadAlignment.java #4529 not yet ready
minor changes
some fixes after trunk integration to 341branch
merge-update from trunk
merge PresenceTerm and AbsenceTerm #4521
remove TODO
creationi fo PresenceAbsence Terms
make all defined terms comparable
add DNA Quality Type vocabulary
Add DnaQuality.csv (not fully ready)
ICdmCacher, DefaultTermInitializer : added comments CdmCacher : added code to disallow null values in cache and moved term initialisation code to specific subclass CdmDaoCacher : replaced with specialised CdmTermCacher defaultApplicationContext : removed remoting exception
cleanup javadoc
update JaxbImportActivator
new convenience method