Revision ffd6058e
Added by Andreas Müller over 4 years ago
| cdm-pesi/src/main/java/eu/etaxonomy/cdm/app/pesi/IndexFungorumActivator.java | ||
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/** |
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* Copyright (C) 2007 EDIT |
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* European Distributed Institute of Taxonomy
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* European Distributed Institute of Taxonomy |
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* http://www.e-taxonomy.eu |
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*
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* |
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* The contents of this file are subject to the Mozilla Public License Version 1.1 |
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* See LICENSE.TXT at the top of this package for the full license terms. |
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*/ |
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import org.apache.log4j.Logger; |
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import eu.etaxonomy.cdm.app.common.CdmDestinations; |
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import eu.etaxonomy.cdm.database.DatabaseTypeEnum; |
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import eu.etaxonomy.cdm.database.DbSchemaValidation; |
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import eu.etaxonomy.cdm.database.ICdmDataSource; |
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import eu.etaxonomy.cdm.io.common.CdmDefaultImport; |
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import eu.etaxonomy.cdm.io.common.IImportConfigurator.CHECK; |
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import eu.etaxonomy.cdm.io.common.IImportConfigurator.DO_REFERENCES; |
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import eu.etaxonomy.cdm.io.common.Source; |
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import eu.etaxonomy.cdm.io.pesi.indexFungorum.IndexFungorumImportConfigurator; |
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import eu.etaxonomy.cdm.io.pesi.out.PesiTransformer; |
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import eu.etaxonomy.cdm.model.name.NomenclaturalCode; |
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/** |
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* TODO add the following to a wiki page: |
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* HINT: If you are about to import into a mysql data base running under windows and if you wish to dump and restore the resulting data base under another operation systen |
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* you must set the mysql system variable lower_case_table_names = 0 in order to create data base with table compatible names. |
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* |
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* |
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* @author a.mueller |
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* |
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*/ |
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public class IndexFungorumActivator {
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@SuppressWarnings("unused")
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@SuppressWarnings("unused")
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private static final Logger logger = Logger.getLogger(IndexFungorumActivator.class); |
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//database validation status (create, update, validate ...) |
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static DbSchemaValidation hbm2dll = DbSchemaValidation.CREATE; |
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static final Source indexFungorumSource = PesiSources.PESI3_IF(); |
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// static final ICdmDataSource cdmDestination = CdmDestinations.cdm_pesi_erms(); |
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static final ICdmDataSource cdmDestination = CdmDestinations.cdm_test_local_indexFungorum(); |
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static final UUID treeUuid = UUID.fromString("4bea48c3-eb10-41d1-b708-b5ee625ed243");
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//check - import |
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static final CHECK check = CHECK.IMPORT_WITHOUT_CHECK; |
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static final int partitionSize = 2000; |
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// static final ICdmDataSource cdmDestination = CdmDestinations.cdm_test_local_indexFungorum2(); |
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static final ICdmDataSource cdmDestination = CdmDestinations.cdm_test_local_indexFungorum2(); |
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static final UUID classificationUuid = UUID.fromString("4bea48c3-eb10-41d1-b708-b5ee625ed243");
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static final boolean doPesiExport = false; |
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//NomenclaturalCode |
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//check - import |
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static final CHECK check = CHECK.IMPORT_WITHOUT_CHECK; |
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static final int partitionSize = 2000; |
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static final NomenclaturalCode nomenclaturalCode = NomenclaturalCode.ICNAFP; |
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// ***************** ALL ************************************************// |
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//taxa |
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static final boolean doTaxa = true; |
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//******************** NONE ***************************************// |
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// |
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// //taxa |
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// static final boolean doTaxa = false; |
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public void doImport(Source source, ICdmDataSource destination){
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System.out.println("Start import from ("+ indexFungorumSource.getDatabase() + ") ...");
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IndexFungorumImportConfigurator ifImportConfigurator = IndexFungorumImportConfigurator.NewInstance(source, destination); |
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ifImportConfigurator.setClassificationUuid(treeUuid);
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ifImportConfigurator.setClassificationUuid(classificationUuid);
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ifImportConfigurator.setNomenclaturalCode(nomenclaturalCode); |
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ifImportConfigurator.setDoTaxa(doTaxa);
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ifImportConfigurator.setDoTaxa(true);
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ifImportConfigurator.setDbSchemaValidation(hbm2dll); |
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ifImportConfigurator.setCheck(check); |
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// invoke import |
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CdmDefaultImport<IndexFungorumImportConfigurator> ifImport = new CdmDefaultImport<IndexFungorumImportConfigurator>(); |
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ifImport.invoke(ifImportConfigurator); |
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if (ifImportConfigurator.getCheck().equals(CHECK.CHECK_AND_IMPORT) || ifImportConfigurator.getCheck().equals(CHECK.IMPORT_WITHOUT_CHECK) ){
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// ICdmApplicationConfiguration app = ifImport.getCdmAppController(); |
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// ISourceable obj = app.getCommonService().getSourcedObjectByIdInSource(ZoologicalName.class, "1000027", null); |
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// logger.info(obj); |
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// //make feature tree |
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// FeatureTree tree = TreeCreator.flatTree(featureTreeUuid, ermsImportConfigurator.getFeatureMap(), featureKeyList); |
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// app = ermsImport.getCdmAppController(); |
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} |
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System.out.println("End import from ("+ source.getDatabase() + ")...");
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} |
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/** |
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* @param args |
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*/ |
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public static void main(String[] args) {
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//make IF Source |
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Source source = indexFungorumSource; |
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ICdmDataSource destination = CdmDestinations.chooseDestination(args) != null ? CdmDestinations.chooseDestination(args) : cdmDestination; |
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IndexFungorumActivator ifActivator = new IndexFungorumActivator(); |
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ifActivator.doImport(source, destination); |
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if (doPesiExport){
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PesiExportActivatorIF ifExportActivator = new PesiExportActivatorIF(); |
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ifExportActivator.doExport(destination); |
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} |
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} |
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} |
Also available in: Unified diff
ref #2826 cleanup IF import