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// $Id$
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/**
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* Copyright (C) 2007 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.cdm.io.pesi.indexFungorum;
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import java.util.HashMap;
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import java.util.Map;
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import org.apache.log4j.Logger;
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import eu.etaxonomy.cdm.io.common.DbImportStateBase;
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import eu.etaxonomy.cdm.model.common.DefinedTermBase;
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import eu.etaxonomy.cdm.model.common.User;
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import eu.etaxonomy.cdm.model.name.Rank;
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import eu.etaxonomy.cdm.model.taxon.TaxonBase;
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/**
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* @author a.mueller
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* @created 11.05.2009
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* @version 1.0
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*/
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public class IndexFungorumImportState extends DbImportStateBase<IndexFungorumImportConfigurator, IndexFungorumImportState>{
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@SuppressWarnings("unused")
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private static final Logger logger = Logger.getLogger(IndexFungorumImportState.class);
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Map<String, DefinedTermBase> dbCdmDefTermMap = new HashMap<String, DefinedTermBase>();
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Map<String, User> usernameMap = new HashMap<String, User>();
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private Map<Integer, Map<Integer,Rank>> rankMap;
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private Map<String, TaxonBase> speciesMap;
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public IndexFungorumImportState(IndexFungorumImportConfigurator config) {
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super(config);
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}
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/* (non-Javadoc)
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* @see eu.etaxonomy.cdm.io.common.IoStateBase#initialize(eu.etaxonomy.cdm.io.common.IoConfiguratorBase)
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*/
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@Override
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public void initialize(IndexFungorumImportConfigurator config) {
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// super(config);
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}
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public Map<String, DefinedTermBase> getDbCdmDefinedTermMap(){
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return this.dbCdmDefTermMap;
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}
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public void putDefinedTermToMap(String tableName, String id, DefinedTermBase term){
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this.dbCdmDefTermMap.put(tableName + "_" + id, term);
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}
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public void putDefinedTermToMap(String tableName, int id, DefinedTermBase term){
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putDefinedTermToMap(tableName, String.valueOf(id), term);
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}
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@Override
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public User getUser(String username){
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return usernameMap.get(username);
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}
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@Override
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public void putUser(String username, User user){
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usernameMap.put(username, user);
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}
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/**
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* @return the speciesMap
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*/
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public Map<String, TaxonBase> getSpeciesMap() {
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return speciesMap;
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}
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/**
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* @param speciesMap the speciesMap to set
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*/
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public void setSpeciesMap(Map<String, TaxonBase> speciesMap) {
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this.speciesMap = speciesMap;
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}
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/**
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* @param rankMap the rankMap to set
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*/
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public void setRankMap(Map<Integer, Map<Integer,Rank>> rankMap) {
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this.rankMap = rankMap;
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}
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// /**
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// * @return the rankMap
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// */
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// public Map<Integer, Map<Integer,Rank>> getRankMap() {
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// return rankMap;
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// }
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/**
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* Returns the CDM rank depending on the ERMS rankId and the ERMS kingdomId. Returns <code>
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* null</code> if the rank does not exist.
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* Throws a RuntimeException if the rank map has not been initialized before.
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* @param rankId
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* @param kingdomId
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* @return
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* @throws RuntimeException
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**/
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public Rank getRank (int rankId, int kingdomId){
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Rank result = null;
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if (this.rankMap == null){
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throw new RuntimeException("rank map not initialized");
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}
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if (kingdomId == 147415 && rankId == 10){
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result = Rank.KINGDOM();
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}else{
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Map<Integer, Rank> kingdomMap = rankMap.get(rankId);
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if (kingdomMap != null){
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result = kingdomMap.get(kingdomId);
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}
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}
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return result;
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}
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}
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